Citrobacter farmeri: CI104_06315
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Entry
CI104_06315 CDS
T05012
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
cfar
Citrobacter farmeri
Pathway
cfar00730
Thiamine metabolism
cfar01100
Metabolic pathways
cfar01240
Biosynthesis of cofactors
cfar04122
Sulfur relay system
Module
cfar_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CI104_06315
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
CI104_06315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfar03016
]
CI104_06315
Enzymes [BR:
cfar01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
CI104_06315
Transfer RNA biogenesis [BR:
cfar03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CI104_06315
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Diphthami_syn_2
Rhodanese
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AST78724
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All DBs
Position
1285151..1286599
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKMLTGNIRNVLKHYDETLAVVRHWDNIEVRAKDENQR
LAIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALAQYRDRLEGKTFCVRVKRRGKHEFS
SIDVERYVGGGLNQHIESARVKLTNPDVTVHLEVEDDRLLLIKGRYEGIGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFV
AINFEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNVSDTLILRPLISYDKEHIINLARQIGTEDFARTMPEYCGVISKSPTVKAIKAKI
EAEEENFDFSILEKVVEEASNVDIREIAQQTQQDVVEVETVSGFGPNDVILDIRAIDEQD
DKPLKVEGVEVVSLPFYKLSTQFGDLDQNKTWLLWCERGVMSRLQALYLREQGFENVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaattaccatcaaaagccaatctgtgcgtttg
cgctttataaaaatgctgaccgggaacattcgtaacgttttaaagcactatgatgagacc
ctcgccgttgtccgccactgggataacatcgaagttcgcgcgaaagatgaaaaccagcgt
ctggcgatccgcgacgcgctgacccgcatcccagggattcaccacattctcgaagtcgaa
gacgtgccgtttaccgacatgcacgatattttcgagaaggcgctggcgcaataccgcgat
cggctggaaggtaagaccttctgcgtgcgcgttaaacgtcgcggtaaacacgagtttagc
tctatcgacgtggaacgttacgtgggcggcggtttaaaccagcacattgaatcggcgcgc
gtgaagctgaccaacccggatgtgactgttcatctggaagtggaagatgatcgtctgctg
ctcattaaagggcgttacgaagggatcggtggtttcccgatcggtactcaggaagatgta
ctctcgctgatctccggcggtttcgactccggggtttccagctatatgctgatgcgtcgc
ggctgccgcgttcactactgcttctttaatctcggcggtgcggcgcatgaaatcggcgtt
cgtcaagtggcgcactatctgtggaaccgcttcggcagctcgcatcgcgtgcgctttgtc
gccatcaattttgagccagtggtcggcgagatcctcgagaaagtcgatgacggtcagatg
ggtgtggtgctcaaacgtatgatggttcgtgcggcgtcgaaagtggcggagcgttatggc
gtgcaggcgctggtcaccggcgaagcgctgggccaggtttccagccagacgctgaccaat
ctgcgtctgatcgataacgtctccgatacgctgatcctgcgtccgctgatttcttacgat
aaagagcacatcatcaatctggcgcgccagattgggactgaagactttgcccgcaccatg
ccggaatactgcggcgtgatttcaaaaagcccgacggtgaaagccatcaaggcgaagatt
gaagcagaagaagagaactttgacttcagcatcctcgagaaggtggttgaagaagcaagc
aatgtggatattcgcgaaattgcgcagcaaacgcagcaggacgtggtggaagtcgaaacc
gtcagtggttttggtccgaacgacgtgattctggatatccgcgctatcgacgagcaggat
gataagccgctgaaggtggaaggcgtggaggtggtttcactgccgttctacaagctgagc
acgcaattcggcgatctcgaccagaataaaacctggctgctgtggtgcgagcgcggcgtg
atgagccgattacaagcgctgtatctgcgcgagcagggctttgaaaatgtgaaggtatat
cgcccgtaa
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