Citrobacter farmeri: CI104_13055
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Entry
CI104_13055 CDS
T05012
Name
(GenBank) oxygen-sensing cyclic-di-GMP phosphodiesterase
KO
K13243
c-di-GMP-specific phosphodiesterase [EC:
3.1.4.52
]
Organism
cfar
Citrobacter farmeri
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CI104_13055
Enzymes [BR:
cfar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
CI104_13055
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GFIT
Motif
Pfam:
EAL
PAS_9
GGDEF
PAS
PAS_4
PAS_8
PAS_3
PAS_7
PAS_10
Motif
Other DBs
NCBI-ProteinID:
AST79932
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Position
2606042..2608447
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AA seq
801 aa
AA seq
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MKLTDVEGSGDSIFFPALEQNMMGAVLINENDEVLFFNPAAEKLWGYRRDEVIGNGISML
IPHDLRAAHPDYIRHNREGGKARVEGMSRELLLERKDGSKVWTRFALSKVNVAGKIFYLA
FVRDASAEMEQREQKRLLVLAVDHLDRPVIVLNSVRRIVQCNRAFTEMFGYGITDASGQQ
PDDLLNIPEEPADNRLRLKQLLWKTTRDQDEFLMVTRAGDKIWIKASVSPVHGTHHELQN
LVMTFSDITEERQIRQLEGNILAAMCTSPPFHEMGDIICRNIEAVLRETHVSLYALKDNT
RQFWAASSKEINAKEVSVWTLTIRQRDGEPAGTLLIKTVKGKETSAFIDRVADISQHMAA
LALEQEKSRQHIEHLLQFDPLTGLPNRNHLHAYLDDLISGAKAFSPVVFLISVDHFQDVI
DSLGYAVADQVLQQVINKIRERLRPNQYLSRIEGTQFVLVSDDNEMSNITQFADELINIG
SEATLFGDKPFPLTFSIGISYEVGKNRDYLLSTAHNAMDFIRKAGGNGWQFFNPEMNLAV
KERLQLGAALKKAIASNQLRLVYQPQIFAQTGELYGFEALARWNDPVHGHVPPNRFIPLA
EETGEIENIGRWVVREACRQLSEWRSMSLTIPTLSVNLSALHFRSNQLPDQVSEAMVEFA
IPGDQLTVEITESMMMEQDEEILRRIEILRNMGVGLSIDDFGTGFSGLSRLVSLPVTELK
IDKTFVDRCQTEKRIQSLLEAIISIGQSLNLMVIAEGVETKEQFELLRSMNCPVIQGYYF
SRPIPADEIATWMQTALPLEI
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaaccgacgttgaaggctccggagacagcattttctttcctgctcttgagcag
aatatgatgggggcggtattaattaatgaaaatgacgaagtcctcttttttaatccggca
gcggaaaaactctggggatatcgtcgggatgaggtgatcggcaatggtatatcgatgctc
attccccatgatttacgcgcggctcatccggattacattcgtcataaccgtgaaggcggc
aaggctcgcgtagaaggtatgagtcgggaattgctgctggaacgaaaagacggtagcaaa
gtctggacacgttttgccctgtcaaaagtgaacgtggcgggtaagattttctatctggcg
tttgtgcgagatgccagcgcagagatggaacaaagagaacagaaacgtttactggtgctg
gcggtcgatcatctcgaccgcccggtgattgtcctcaactctgtgcggcgcattgttcag
tgtaaccgcgcctttaccgagatgtttggctacggcattactgatgcgtcgggccaacaa
ccggatgatttgctcaatattcccgaagagccagcggataatcgcctgagactcaaacag
ctactctggaaaacgacccgcgatcaggatgagtttctgatggtcacccgtgcgggcgat
aagatctggattaaagcgtctgtcagcccggttcatggcacgcatcatgaactgcaaaac
ctggtcatgaccttttccgatatcaccgaagaacggcagattcgccagctcgaaggcaat
attctggctgcgatgtgcaccagcccaccctttcacgaaatgggtgacattatttgccgt
aatatcgaagcggtactgcgggaaacgcatgtttcgctgtatgccctgaaagataacacc
cgtcagttctgggcggcgtcatcgaaagagatcaacgcgaaagaggtaagcgtctggacg
ctcactattcgacaacgagatggggagccagccggtacgcttttaataaaaacggtgaaa
gggaaagagaccagcgcctttatcgatcgcgtggcggacatcagtcagcatatggcggcc
ctggcgcttgaacaggagaaaagccgtcagcatatcgagcatctcctacagtttgatcca
cttaccggtctgcccaaccgtaatcacctgcacgcctatctcgacgatctcattagcggc
gcaaaagcgttttcgccggtcgtgtttctcatcagcgtcgatcacttccaggatgttatc
gacagtctcggctatgccgttgccgatcaggttttgcagcaggtcatcaataaaatccgc
gagcggctcagacccaatcagtatttaagccgtatcgaaggcacccaatttgtgctggtc
agtgacgataacgaaatgagtaatatcacccagtttgcggatgaactgatcaacatcggc
agtgaagcaacgctttttggcgacaagcccttcccgctgaccttcagcattggcattagc
tatgaagtgggaaaaaatcgtgactacctgctttccacggcccacaacgcgatggatttt
attcgtaaagcgggcggcaacggctggcagttcttcaacccggaaatgaatctcgcggta
aaagagcgtttgcaactgggcgccgcattgaaaaaagccattgccagtaaccagttgcgg
ttggtgtatcaaccgcagatctttgcccaaacgggtgaactgtatggctttgaagcgctt
gcgcgctggaatgacccggtgcacggtcacgttccgcccaaccgttttattcccctcgcc
gaagagacgggcgaaattgagaatattggtcgctgggtcgtcagagaagcgtgtcgccag
ttatcagaatggcgctcgatgtcgttgactattccgacgctgtcggtgaacctctccgcc
ctgcactttcgcagcaatcaactgccggaccaggtgtcggaagcgatggtggaatttgct
attccgggcgatcaactgacggttgaaatcaccgaaagcatgatgatggaacaggatgaa
gagatcctcagacgcattgagatcttacgcaacatgggggtcggactgtcgatcgatgat
ttcggtaccggtttttccggtctctcccgcctggtcagcctgcccgtgacggaattaaaa
attgataagaccttcgtcgatcgctgccagaccgagaagcgtattcagtctttgctggaa
gcgattatcagcattgggcagagcctgaatctgatggtgattgcggaaggcgttgagacg
aaggaacaatttgagctgctgcgttcgatgaattgtccggtgattcagggatattatttt
tctcgccccattccggcagatgagatcgccacctggatgcagacggcgctaccgttggaa
atctga
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