Citrobacter farmeri: CI104_13725
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Entry
CI104_13725 CDS
T05012
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
cfar
Citrobacter farmeri
Pathway
cfar00010
Glycolysis / Gluconeogenesis
cfar00020
Citrate cycle (TCA cycle)
cfar00620
Pyruvate metabolism
cfar00650
Butanoate metabolism
cfar01100
Metabolic pathways
cfar01110
Biosynthesis of secondary metabolites
cfar01120
Microbial metabolism in diverse environments
cfar01200
Carbon metabolism
cfar01210
2-Oxocarboxylic acid metabolism
Module
cfar_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CI104_13725 (nifJ)
00020 Citrate cycle (TCA cycle)
CI104_13725 (nifJ)
00620 Pyruvate metabolism
CI104_13725 (nifJ)
00650 Butanoate metabolism
CI104_13725 (nifJ)
Enzymes [BR:
cfar01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
CI104_13725 (nifJ)
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4_16
Fer4_21
Fer4
Fer4_10
Fer4_9
Fer4_6
Fer4_2
Fer4_8
Fer4_17
Fer4_4
Transketolase_C
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
AST80058
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All DBs
Position
2757039..2760563
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AA seq
1174 aa
AA seq
DB search
MQTIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGLKNIWGDTPRVVEMQSE
GGAIATVHGALQTGALATSFTSSQGLLLMIPTLYKLAGQLTPFVLHVAARTVATHALSIF
GDHSDVMAVRQTGCAMLCAASVQEAQDFALISQIATLKSRVPFIHFFDGFRTSHEINKII
PLADDTIRGLMPQAEIEAHRARALNPEHPVIRGTSANPDTYFQSREATNPWYDAVYDHVQ
QAMNDFAAATGRQYQPFEYYGHPQAERVIILMGSAIGTSEEVVDELLTRGEKVGVLKVRL
FRPFSATHLLRALPDSVRAVAVLDRTKEPGAQAEPLYLDVMTALAEAFNCGERETLPRVI
GGRYGLSSKEFGPDCVLAVFNELNHAKPKPRFTVGIYDDVTNLSLPLPDNTLPSTAKLEA
LFYGLGSDGSVSATKNNIKIIGNSTPWYAQGYFVYDSKKAGGLTVSHLRVSEQPIRSAYL
VSQADFVGCHQLQFIDKYQMAERLKPGGIFLLNTPYPADEVWSRLPQEVQAVLNQKKARF
YVINAAKIARECGLAARINTVMQMAFFHLTQILPGDSALAELQGAIAKSYSSKGQDLVER
NWQALALARESVVEVPLQAVDPHSANRPPVVSDAAPDFVKTVTAAMLAGLGDALPVSALP
PDGTWPMGTTRWEKRNIAETIPIWKEELCTQCNHCVAACPHSAIRAKVVSPEAMANAPSS
LHSLDVKSRDMRGQKYVLQVAPEDCTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEE
KVNYDFFLDLPEIDRSTLERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRML
IANATGCSSIYGGNLPSTPYTTDANGRGPAWANSLFEDNAEFGLGFRLTVDQHRVRVLRL
LEQFADQIPAELNEALHAEATPEVRREQVAALRQHLKDVDGARELLTDADALVEKSIWLI
GGDGWAYDIGFGGLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRK
ARKDLGVSMMMYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLAL
SHDQMRQLTATGFWPLYRFDPRRADEGKLPLALDSRPPSDALAETLLNEQRFRRLNAQQP
EVAEQLWKDATADLQKRYDFLAQLAGKAEKSSTD
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaattgacggtaatggtgcagtcgcttcggtggcgtttcgtaccagtgaagtt
atcgccatctaccccattacgcccagttcaacgatggccgaacaggcagatgcctgggca
ggcaacgggcttaaaaatatctggggggatacgccacgcgtcgtcgaaatgcagtcggag
ggtggcgctattgcgaccgttcacggtgcgctgcaaaccggcgcgcttgccacctccttt
acctcttcacaggggttactgctgatgatccccacgctgtacaaactggcgggccagtta
accccctttgtactgcatgtcgccgcacgaacggtggcaacccatgcgctgtccattttt
ggcgatcattctgatgttatggccgtccgccagaccggctgcgccatgctgtgcgcggca
agcgtccaggaagcgcaggactttgcgctgatctcacaaatcgccaccctgaaaagtcgg
gttccctttattcacttctttgatggtttccgcacatcgcatgagatcaacaaaatcatt
ccgctggcggatgacacaattcgcggcctgatgccgcaggctgaaattgaggcgcaccgc
gccagggcgctcaatccggaacacccggtgatccgcggtacctctgcgaatccggatact
tacttccagtcccgggaggcaaccaacccgtggtatgacgcggtatatgaccatgtccaa
caggcgatgaatgacttcgccgcggcaacgggtcgtcagtatcagccgtttgaatactac
ggccatccgcaggccgagcgggtcatcattctgatgggctccgccattggtaccagcgaa
gaggtggtcgatgaactgttgacgcgtggtgaaaaagtcggagtactgaaagtccgtctg
ttccgccccttctcggctacgcatctgctgcgggccttgcctgattccgtccgcgcggtt
gccgtgctcgatcgcaccaaagaaccgggtgcacaggccgaaccattgtatctcgatgtg
atgaccgcgctggcggaagccttcaactgcggcgaacgcgaaacgttgccgcgtgtgatt
ggcggccgttatggcctctcgtcaaaagaatttggtccggactgcgtgctggcggtcttt
aatgagctgaaccacgccaaacccaaaccgcgctttaccgttggtatttacgatgatgtg
accaacctgtcgttgccgctacctgataacaccttaccgtctaccgctaaactggaggcg
ctgttttacggcctcggcagtgacggcagcgtttcggcaaccaagaacaatatcaagatc
atcggcaattcgacgccgtggtatgcccagggttacttcgtttatgactctaaaaaggct
ggcggtctgacggtttctcacctgcgcgtgagtgaacagccgattcgatccgcttacctg
gtttctcaggccgattttgtcggctgccaccagctgcagtttatcgacaagtaccagatg
gctgagcgtctgaaacctgggggcattttcctgctgaatacaccttatcccgccgatgag
gtatggtcgcggttaccgcaggaagtacaggcggtactgaatcagaagaaagcgcgtttt
tacgtcatcaatgcggcgaaaatcgcccgtgaatgtggactggcggcacgtattaacacc
gtcatgcaaatggcgtttttccatctgactcaaatcctgcctggcgacagcgcgctggct
gagcttcagggcgcgatcgccaaaagctacagcagcaaaggacaggacctggtggagcgc
aactggcaggcgctggcactggcgcgggaatccgttgttgaggtgccgctgcaagcggtt
gatccgcacagcgccaaccgtcctccggtggtgtctgacgccgcgcctgactttgtaaaa
acggtcaccgccgccatgctcgcgggactcggcgacgcccttcccgtttcggcgctcccg
cccgacggcacctggcctatgggcaccacgcgctgggaaaaacgcaacattgccgaaacg
atccccatctggaaagaagagctttgcacccagtgtaaccactgcgttgccgcctgcccg
cactcggcgattcgcgccaaagtggtctcgccggaagccatggcaaacgccccttcaagc
ctgcattcgctggatgtgaaatcacgcgacatgcgcgggcagaaatacgttctgcaggtc
gcaccggaagattgcaccggctgtaatctgtgcgtggaagtgtgtccggcgaaagatcgg
cagaatccggaaatcaaggccatcaatatgatgtcccgccttgaacacgtagaggaagaa
aaagtgaactatgactttttcctcgacctcccggaaattgaccgcagcacgcttgagcgc
atcgatattcgtacgtcacagttgattacgccgctgtttgaatattccggcgcctgctcg
ggctgtggcgaaacgccgtatatcaagttactgacacaactctacggtgacagaatgctg
atcgccaacgccacgggttgttcgtctatttacggcggtaacctgccttcgacgccgtac
acgaccgatgctaatggtcgcggccccgcgtgggcgaactcgctgtttgaagataacgca
gagttcggtctgggtttccgtctgacggtcgatcaacatcgggtacgcgttctgcgcctg
cttgaacagtttgccgaccagatcccggccgaactgaacgaggcgttgcatgcagaagcc
acacctgaagtgcgtcgtgagcaggttgccgcgctgcgtcagcatctgaaggatgtcgat
ggtgcgcgtgaactgcttactgacgctgatgcgctggttgaaaaatcgatctggctgatt
ggcggcgacggctgggcctacgatattggctttggcggtctggatcatgtacttagcctg
actgaaaacgtcaatattctggtactggatacgcagtgctactccaacactggcggtcaa
gcctcaaaagccacaccgctcggtgccgtaacgaaatttggtgagcacggtaagcgtaag
gcgcgtaaagatctgggtgtcagcatgatgatgtatggtcatgtctatgtggcgcagatt
tcgctcggtgcacaactcaaccagaccgtgaaggcgattcaggaagcggaagcgtatccg
gggccgtcgctgatcatcgcctacagcccgtgtgaagaacacggctatgacctcgcgctg
agtcacgatcagatgcgtcagttaacggcgaccggcttctggccgctctaccgctttgat
ccgcgccgtgcggatgaaggtaaattgccgctggcgctggactctcgcccgccgtcagat
gcgctggcggagacattgctcaacgaacaacgtttccgtcgcctgaacgcgcagcagccg
gaagtagccgaacagttatggaaagacgccacggcggatctgcaaaaacgctatgacttc
ctggcgcaactggctggtaaagcagagaagagcagtaccgactga
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