Coprobacter fastidiosus: Cfast33896_00310
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Entry
Cfast33896_00310 CDS
T09127
Name
(GenBank) nickel-dependent hydrogenase large subunit
KO
K06281
hydrogenase large subunit [EC:
1.12.99.6
]
Organism
cfas
Coprobacter fastidiosus
Pathway
cfas01120
Microbial metabolism in diverse environments
cfas02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cfas00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00633 Nitrotoluene degradation
Cfast33896_00310
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Cfast33896_00310
Enzymes [BR:
cfas01000
]
1. Oxidoreductases
1.12 Acting on hydrogen as donor
1.12.99 With unknown physiological acceptors
1.12.99.6 hydrogenase (acceptor)
Cfast33896_00310
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GFIT
Motif
Pfam:
NiFeSe_Hases
Motif
Other DBs
NCBI-ProteinID:
BEG61076
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Position
complement(40583..42301)
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AA seq
572 aa
AA seq
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MSTRVVVDPITRIEGHLRIEADIENGIIKDAFSTGTMVRGIEIIAQNRDPREVWAYVGRV
CGVCTSIHSLASVRAVENALGIIIPPNAERVRSLMQIALTEQDHVVHFYQLQALDWVDVV
SALKADPKKTSAIAQSISAWPKSSIGYFTDIQKKIKKFVESSKLGIFANGYWGHPAYKLP
PEVNLLGVAHYLEALEVQKDIVKVQTIFGGKNPHPNYLVGGMACAVNINDPNAINLERLS
YVAEIIQTTQNFVRQVYLPDVLAIASYYPEWTKIGGGLRNYISYGDYPTGNYGELSTYKS
PRGIIINRDLHHIEDFDPYAMDGLQEYVNNSWYSYSEGKEVGLHPSIGETNLDYTGPTPP
YQYLDNSQPYSWIKTPRYKNRPMETGPLARMIVGYASGRDDYKDLTDRCLKQLNVPFEAM
YSTIGRTLARAMESNLLADWMQDFYIQLLQNIKSGDYRMFNNIYWEPSTWPQKAQGIGLA
EAPRGSLAHYVNIENKQIKNYQMVVPTTWNASPRDTKGQRSSFEESLLGTPVHDTSAPLE
IIRTIHSFDPCMACAVHLYDEEGKHIHQFDTL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgagtacacgagttgttgttgatccgattaccagaatcgagggtcatttaaggatagaa
gcagatattgagaacggtatcatcaaagatgccttttccaccggtacaatggtacgcggc
attgaaattattgcacaaaaccgtgatccgagagaagtctgggcttatgtaggacgtgta
tgcggagtatgtacgtctatacattctctggcttcggtcagggctgtagagaatgcgctg
ggaatcattattccgccgaatgcggaacgtgtacgaagtctcatgcaaatagcacttaca
gaacaagatcatgtagttcatttctatcaattacaggctttggactgggtagatgtagtt
tcagcgctcaaagcagatccaaaaaaaacatctgctattgctcaaagcatctcggcatgg
ccgaaaagttcgataggttattttacggacatacagaagaaaattaaaaaatttgttgaa
tccagcaaactcggaatctttgcaaacggatactggggacatccggcgtacaaattgcct
ccggaggttaatctgttgggagtagcccactatctggaagctctggaagtacaaaaagac
atagtaaaagtacaaactattttcggaggtaaaaatcctcatcccaattatttagtcggg
ggaatggcgtgtgcggtcaatatcaacgatcccaatgccattaatctggaacgcctcagt
tatgtagccgaaattattcaaacaactcaaaatttcgtccgacaagtttacttgcccgat
gtacttgccattgcatcctactatcccgaatggacaaaaataggaggaggattgcgaaat
tatatttcatacggagactatcccacgggaaattatggggaactaagtacttacaaaagt
ccgagaggaatcatcataaaccgagatctacaccatatcgaagatttcgatccttatgca
atggatgggcttcaggaatatgtaaataattcatggtacagttacagtgaaggtaaagaa
gtcgggctgcacccttctatcggagaaacgaatctggattataccggtcctacccctccc
taccaatatctggacaattctcaaccttatagctggataaaaaccccacgctataagaac
cgacctatggaaaccggacctttggctcgaatgattgtcgggtatgcttccggtcgagac
gattataaagatttgacagatcgctgtttaaagcaactaaatgttccctttgaagctatg
tattcaactatcggacggactctggcccgtgctatggaatcgaatctattggctgactgg
atgcaggatttctatattcaattgttgcaaaatataaaatcgggagattatcgaatgttc
aacaatatatattgggaaccttctacttggcctcaaaaagctcaaggaatcggactggca
gaagcccctcgcggatcgttagcacattatgtcaatatagaaaataaacaaataaaaaac
tatcagatggtagtcccgacaacatggaacgcctctccaagagatacaaagggacaacgc
tcctcttttgaagaatcattattgggaactcccgtacatgatacttcagctccattggaa
atcatacgtaccattcattcttttgacccgtgtatggcttgtgccgtacatctatatgac
gaagaaggaaaacatatacaccagttcgacactctataa
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