Coprobacter fastidiosus: Cfast33896_15070
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Entry
Cfast33896_15070 CDS
T09127
Name
(GenBank) chondroitinase family polysaccharide lyase
KO
K08961
chondroitin-sulfate-ABC endolyase/exolyase [EC:
4.2.2.20
4.2.2.21
]
Organism
cfas
Coprobacter fastidiosus
Brite
KEGG Orthology (KO) [BR:
cfas00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Cfast33896_15070
Enzymes [BR:
cfas01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.20 chondroitin-sulfate-ABC endolyase
Cfast33896_15070
4.2.2.21 chondroitin-sulfate-ABC exolyase
Cfast33896_15070
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Gene cluster
GFIT
Motif
Pfam:
Lyase_catalyt
Lyase_N
Lyase_8
Lyase_8_C
Motif
Other DBs
NCBI-ProteinID:
BEG62552
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Position
complement(1940798..1943752)
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AA seq
984 aa
AA seq
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MFIKDICIKRKTLSMKIKWLALLLIVLFSYNGYSQKIDWNVSIPEYISATSAKLSLNKDF
VKKGTASLQWQWFSPSVLTVDNPSLLQKAVGTRKGGLTMWVYNDEPVNAALRISFVAADG
SIPYWFDYHLGFSGWRACWISFENMQGDHKSKELVRWTMTTPENLKTGTLLIDRVEFPAK
GVHHQATPDYQTPLNNTKLSRTLWHWARLYEWEHYEYDLPLASVGSSQRQDIELLSRRLT
DQVAPETGKGNATRALSIAEKASIHRVDGKITGAPLVSNDELNKNAGEIGLSDLETMLFG
FAGDWYYNKNKESKQAFFDVFEYAMQQGFAFGSGLGTNHHYGYQIRDIYKAAWMMRDLLK
EETPLNKNIRRTLAYWSGLAETRIPYQYGRDELLDSWNTLLTAKVISALIQPDMRDQVRS
MKALSRWVSGSLGFTPGTIGGIKVDGTTFHHGGLYPAYSIGAFATIGKYLELTNHTEFTI
SDDAARNVKLALQTMRNYCNLKDWGLGIAGRHPFDGSISNDAVQTFALLADRGDLTGSGN
KIDEELAADYLRLNRTSSPYKRKFEQAGIKAASSPQGFFVYNYGALGIHRFGNWMVTLKG
YNTDVWCSEIYTKDNRYGRYQSYGSVQILASGRPVNSFASGFVEDGWDWNRVPGTTTIHL
PLEKLENPLPGTLMERSEENFSGASSLEGKQGVFVFKLKEKDRENFTPGFVARKSVFCFE
NRLVCLGSNISNNNKEYPTETTLFQLALKRNSEPILLGSDTIVGLPIEKTISEKSSVLLS
DTKGNYYRIAAGQDLRILRQKQKSRDNKQKSETEGKFVTAYLNHGVSPDNAEYEYMVLVQ
PTPDQAKEIASEEGLPYQILRKDHYAHIVKDIPSGTVGYVMFETLDNIKDDYLLASDAET
LILLRPTDKKTLVMSICDPNLNLEEKTYTTAKPSRPLIKSILLKGKWKNVSDNDEVVIKQ
ENGNTRLTATCIDGRPVEFKLIAQ
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgtttattaaggatatttgcatcaaacgaaaaacactctctatgaaaataaaatggttg
gccttgcttctgattgttctgttttcttataacggatactctcaaaaaatcgactggaat
gtttctattccggaatatatttctgcaacttcggctaaattatctttgaataaggatttt
gtaaaaaagggaactgcttctcttcaatggcagtggttttctccttctgtactgactgtt
gataacccttcattgttgcaaaaggctgtcggaactcgtaaaggcggattgacgatgtgg
gtgtataatgatgaacctgtgaatgctgcgttgcgaatatcttttgttgcagccgatgga
tcgattccttattggttcgattatcatctcggattttccggatggcgagcttgttggatc
agctttgagaatatgcagggagatcataaaagtaaagagttggtacgttggacgatgact
acacctgaaaatttaaaaacgggaactcttttaatcgaccgggtcgaatttcctgcaaaa
ggagttcatcatcaagcgactccggattatcagactcctttgaataatacaaaactatct
cggactctttggcattgggctcgattgtatgaatgggaacattatgaatatgatctgccc
ttagcgtctgttggttcatcacagagacaagatatagagttgctctcccgtcgattgacg
gatcaggtcgctccggaaaccggaaaaggtaatgctacccgggctttatccattgcggag
aaagctagtatccatagggttgacggaaaaataacaggtgctccgctagtgtctaatgat
gagttgaataagaacgcaggagagatcggtttgtctgatctggaaaccatgttattcggt
tttgccggagattggtattacaacaaaaataaagaatcgaaacaagctttctttgacgta
ttcgaatatgcaatgcagcaaggttttgcttttgggagcggtttgggaactaatcaccat
tacggataccagattcgggatatttataaagccgcatggatgatgcgtgatttattaaag
gaagaaactcctttaaacaagaatattcgtcgtactttggcatattggagcggattagcg
gagacacggattccttatcagtatggtagagacgaattacttgattcgtggaatacatta
ttgacagcgaaagtaataagcgctcttattcagccggatatgagggaccaggttcgtagt
atgaaagctttgagccgttgggtaagcggatctttgggcttcactcccggaacgatagga
ggaattaaagttgatggtactacttttcatcatggaggtttatatccagcatattcgatt
ggagcttttgctactatcggaaaatatcttgagctgacgaaccatacagaatttactatt
tctgatgatgcagctcgtaatgtaaagcttgcattgcaaacaatgcggaattactgtaat
ttaaaagattggggactgggtatagccggacgacatccttttgacggatcgatttcgaat
gatgcagtacaaacttttgctttgttggcagatagaggagaccttaccggatcggggaat
aagatcgatgaagagctggctgccgattatttgagactgaacaggacttcgtctccatat
aaaagaaaatttgaacaagctggtattaaagcagcttcatcgccacagggcttttttgtc
tataattatggagctttgggaatacatcgttttggaaattggatggtgacgttgaaggga
tataatactgatgtttggtgttccgaaatatatacaaaagacaaccgttacggtcgttat
cagagttatggatcggtacagattttagcatccggtcgtccggtcaatagctttgcaagc
ggatttgtcgaagatggctgggattggaatcgtgttccgggaacaacaacaatacatctt
ccgttagaaaagcttgaaaatcctcttccgggaacattgatggagcgttctgaagaaaat
ttttctggagcgtcatctttggaaggaaaacaaggagtattcgtttttaagctgaaagag
aaagatcgggaaaattttacacccggattcgtagcccgaaagtcagtcttttgctttgaa
aaccgtttggtatgcttaggatcgaatatctctaataataataaagaatatccgacggaa
accacgttgtttcaactggcattgaaaagaaattctgaacctatattgctcggttcggat
acaattgtcggtcttccgatagaaaaaacgatttcagaaaaatcatctgtacttttatct
gatacaaaaggtaattattaccggattgctgccggacaagacttgcgtattttaaggcaa
aaacaaaaatccagggataacaagcagaagtcggaaaccgaaggtaagttcgtaacagct
tacctgaatcacggtgtatctcctgataatgccgaatacgagtatatggtattggtacag
ccgactcctgatcaagcaaaagaaatagcatcggaagaaggattgccttatcagatactt
cgaaaagatcattatgcacatattgtaaaagatattccgagtggtacggtggggtatgtt
atgtttgaaactttggacaatataaaggatgattatttgcttgcctctgatgccgaaaca
ttgattcttttgcgtccgacagataaaaagactttggtgatgagtatttgcgatccgaat
ctgaatttggaagagaaaacttatacgacggccaaaccttcacggccgcttataaaaagt
attcttctaaaagggaaatggaagaatgtatcggataatgatgaggtcgttataaaacaa
gaaaatggaaatactcgcctgactgctacttgtatcgatggtcgtccggtggaattcaag
ttgatagcccaataa
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