Ctenocephalides felis (cat flea): 113372255
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Entry
113372255 CDS
T08578
Name
(RefSeq) LOW QUALITY PROTEIN: protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
cfel
Ctenocephalides felis (cat flea)
Pathway
cfel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cfel00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113372255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfel03019
]
113372255
Enzymes [BR:
cfel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
113372255
Messenger RNA biogenesis [BR:
cfel03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
113372255
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
CbiA
ATP_bind_1
AAA_22
nSTAND3
MMR_HSR1
CTV_P13
AAA_18
AAA_24
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
113372255
NCBI-ProteinID:
XP_026468364
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MAEAQVKKVQEFKLDPDTELRFEVESKNEHVTLTLKSGFAELFGTELVIGKKYEFKTGAK
VAVFSWQGATLELEGKTDVSYIARDTPMVQYLNCHNALEQQRDAAEKKNIRGPICMIVGP
MDVGKSTLCRLLLNWAVRCGRRPIMVDLDVGQGNIAIPGTIGALLIERPAPVEEGFCQEA
PLVYHFGHKSPSGNYQLYNMAVTRLSEVILERIEANKKSKSSGIVINTCGWVKGEGYKQL
THAAQAFEVDAILVLDQERLFNELVRDMPDFVKVVLLPKSGGVVERSKTTRAETREQRIR
EYFYGERIPYYPHSFDVKFSEAKIYKIGALDLPXSCVPIGIKIDDSSTKLMPIPPGPALL
HHLLAVTFAENPDEEVLQSNIAGYVCVTHVDMERQVFTVLSPQPRPLPQTVLLLSDLQFM
DSH
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcacaagtaaaaaaagtgcaagaatttaaattagatcccgatacagaattg
cgttttgaagttgaatccaaaaatgaacatgttacactaacactaaaatctggttttgca
gagttgtttggaacagagttagttataggaaagaagtatgagtttaaaacaggtgctaaa
gtagcagtattttcttggcagggtgctactttagaacttgaaggcaaaactgatgttagt
tacattgccagagacaccccaatggtacagtatttaaattgtcataatgctttggagcaa
caaagagatgctgcagagaaaaaaaatatcagaggtcctatttgtatgattgtaggcccc
atggatgtcggcaaatcaacattatgcaggcttttactgaactgggctgtaagatgtggc
cgtaggcctataatggtagatttagatgttggacaaggtaatatagcaattccagggaca
attggagctttacttattgaaagacctgcaccggttgaagaaggtttttgtcaggaagca
ccgttggtttatcattttggtcacaaatctccaagtgggaattatcaattgtataacatg
gctgtaacacgtctttcagaagttattttggaacgaatagaagcaaataaaaaatctaag
tcgtctggtattgttataaatacttgtggatgggttaaaggcgaaggttacaaacagctt
acacatgcagcacaagcttttgaagttgatgctattttagttttagaccaggaacgttta
tttaatgaactggtcagggatatgccggattttgttaaagtcgtattgttacctaaaagt
ggaggtgttgttgaaaggagtaaaacaactcgagcagaaaccagggagcagaggataaga
gaatatttttatggggagcgaataccttattatccacattcttttgatgttaaattcagt
gaagctaaaatatataagattggcgctttagatttgccgnattcctgtgtccccataggc
ataaaaatagacgacagttctacaaaactgatgccaattccaccaggtccagcactattg
catcatttactagctgtaacttttgctgaaaatccagatgaagaagtattacaaagtaac
attgccggttatgtttgtgtgacacatgtagacatggaaagacaagtttttacagttctc
tcacctcaaccaagaccgttgccacaaacagttttactattgtccgatttgcagtttatg
gacagtcactga
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