Ctenocephalides felis (cat flea): 113388420
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Entry
113388420 CDS
T08578
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
cfel
Ctenocephalides felis (cat flea)
Pathway
cfel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113388420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfel03021
]
113388420
Enzymes [BR:
cfel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113388420
Transcription machinery [BR:
cfel03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
113388420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
113388420
NCBI-ProteinID:
XP_026481583
LinkDB
All DBs
Position
Unknown
AA seq
1594 aa
AA seq
DB search
MSRHAIRKFNLDLHMDPSNVVFSMFTDEEIKKLSVCKIYTPMTFNSLGNPLPGGLYDPCL
GPLGERSDPCQTCFHNVIGCPGHIGHIELPLPVLNPLFYNMIRSLLKITCVTCFRLQIPD
HVNKLLLLQLQLVNAGYLMEAQNLDLYMNVTPEDKENYPEELLNNYAELAKKGNFTQKNK
NIEGIRSNFISTVIKQIQVKKICMHCKQHLIKISGMHHKLMIEVAAKDKDDSKVMKSSMT
LLFPGDCREYFRKLWVQEKDLLQEIISVLKGNNTATHPTDVMFLEVVAVPPPNVRPVNYM
NGKMIEHPQSQVYKAILNSCTVVRAILQCVNNEGNVLETTQVVYNNSMGQTGIEKLNNAW
QQLQASVDHLMDVEMNKITGSVDGQGLKQIMEKKEGIIRMHMMGKRVNFAARSVITPDPN
LNIDEIGVPEAFAKKLSYPVPVTSWNVTELRKMVMNGPNVHPGAVMIENEDGSLIKIPSD
EITKRXSIAKRLLTPSESGKQGVKIVHRHLCNGDILLLNRQPTLHKPSIMAHKARILPGE
KTLRLHYANCKAYNADFDGDEMNAHFPQNELARSEGYNIVNVCNQYLVPKDGTPLSGLIQ
DHMIAGVRLSMRGRFFTKEDYHMLVYSALVHIQGDIKLLPPAILKPVKLWSGKQVISTLI
INHIPKKAIALTLNSTAKIPANAWQLETPRPWLAGGTQFKNSNEMTEAEVVIQKGQLLCG
VLDKTHYGATPYGLIHCMYELYGGSWSNKLLSSFAKLFTSFLQREGFTLGVHDILVQKSA
DEKRAKIIAETRKVGPKASAEAVNLTEEADAEEVTEAVELAHSTNPKFRAIIDRKYKEAL
NNYTNRINKTCLPAGLLCKFPYNNLQLMVQSGAKGSTVNTMQISCLLGQIELEGKRPPVM
ISGKSLPSFPAYEPSPRAGGFIDGRFMTGIQPQEFFFHCMAGREGLIDTAVKTSRSGYLQ
RCLIKHLEGLTVKYDLTVRDSDNSVIQFLYGEDGMDISKVQFLNKKLIPFLNDNSDVILN
KKIVEKFNEEGVPEDLTQTIKQVSKRLKRWKRKYGDPLQKDRTSPFAQYSRKYLPEKDSI
ESAQKKSKMTGRTRLTKKVIKMWRAIPKEEKEKLKAKLKNMCPDPLISKYQPDHYFGVIN
ENLENLMKDYLDKQNVKEDFEDMIKYKAMTTLCEPGEPVGLLAAQSVGEPSTQMTLNTFH
FAGRGEMNVTLGIPRLKEILMTASKDIKTPCMDIPFRENVAKHFSETERLRKRLVRVTIA
EVLKKVQVHRIVTGARNKMHKYSVKFEFLPHGAYKNDFCVKPKGIMKFMEQKYCPSLMRA
IVKSSNSKQMLIVDEKQKSKRNKKDNDDENEDKAAKKSGYKTFGEDYATSDEDEGLGDDE
DATNARKRSRKKDDQEYDVSEDEQNDVTSEDDMDEDSNESKNLENGNDADDVKTEMCDDG
FSFDETNFLWCKYVFTALLKSRHLGNTDIKRAITYQNNDGELVLKTDGINIVEMFKYNDL
LDLNKLYSNDVHCIAQTSGIEAASRVIVKEVQNVFQRLRITVDPIHLLLIADYMTYYGXF
QPLSRTGLETSVSPLQQMSYESSLTFLNKRYHKR
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcacgctataagaaaattcaacttggatctgcatatggatccaagtaatgtt
gtattttcaatgttcaccgatgaagaaatcaagaagttgagtgtttgtaaaatttataca
cccatgacattcaatagtttggggaatcctttgcctggaggactttatgacccttgttta
ggccctttgggtgaaagaagcgatccttgccaaacatgttttcataatgtcataggttgc
cctggacatattgggcatatcgaactacccttaccagtactgaatccgttgttttataat
atgatacggtctttgctgaagattacatgtgttacttgttttcgattgcaaattccagat
catgtgaacaaattgcttcttctacaattacaattggttaatgcgggttatctcatggag
gctcaaaatttagatttatatatgaatgttacacctgaggataaagaaaattatccagag
gagctgctgaataattatgcagagcttgccaaaaaaggtaactttacccaaaagaacaaa
aacatcgaaggcatcagaagcaacttcataagcaccgtcataaaacagattcaagtcaaa
aaaatttgcatgcattgcaaacagcatttgattaaaatcagtggcatgcatcataaattg
atgatagaagtcgcggctaaagataaagatgattcgaaagttatgaaaagttccatgacc
ctgttattccctggggattgtagagagtatttccgaaaattgtgggttcaagaaaaggat
ttgttgcaagaaattatatcggttttgaagggcaacaatacggcgactcatccgactgat
gtgatgtttcttgaagtcgttgctgtgcctccgccgaatgtcagaccggtgaattacatg
aacggtaaaatgatcgagcatccccaatcccaagtctacaaggcgattttgaacagttgt
acagtagttcgtgcaattttgcaatgtgtcaataatgagggtaatgtgttggagacgacg
caagtcgtttataataattcaatgggacaaactggtatcgagaagctgaataatgcttgg
cagcaattgcaagctagtgtggatcatctaatggacgtcgagatgaataagattactggg
agtgttgatggtcagggactgaaacagattatggaaaagaaagaaggtattatccgtatg
cacatgatgggaaagcgtgtcaatttcgcagcccgttccgtaataacaccagatccgaat
ttgaacatcgacgaaatcggagtacccgaagcattcgccaagaaactatcttatccagta
ccagtaacgtcctggaacgtgacagaactgcgaaaaatggtcatgaacggccctaacgtc
catcctggtgctgtcatgatagaaaacgaggacggctctttaataaaaataccgagtgat
gaaatcactaaaaggnaaagtattgctaaacgtctcctcacgccttcggagagcggaaaa
caaggggttaagatagtacataggcatttgtgtaacggtgatattttgttgctaaatcgg
caacccacgttgcacaagccgtcgataatggcgcacaaggccaggattttaccaggagag
aagactttgagactccattacgccaattgcaaggcgtacaacgctgattttgacggtgac
gagatgaacgcacattttccccaaaacgaactggccagaagcgaaggctacaacattgta
aacgtttgcaaccagtacctggtgcctaaagacggaacacccctcagtggtctcatccag
gaccacatgatagccggggtaagactatccatgcgcggtagatttttcaccaaagaagat
taccacatgcttgtctatagcgctctggtccacatccaaggcgacatcaaacttctacca
ccagccatactcaaaccagtaaaactttggtcagggaaacaagttatatcgactttgata
ataaaccatatacccaaaaaggctattgctttgaccctgaattctactgctaaaattcct
gcaaatgcctggcagctggagacaccaagaccgtggttggctggtggtacccaatttaaa
aattctaatgagatgaccgaggctgaagtggtgatacagaaggggcagttgctgtgcggg
gttttggataagacacattatggagctacgccttatggactgattcattgcatgtacgag
ctttatggtggttcctggtcgaacaagctcctaagttcttttgccaaattgttcaccagt
tttctgcaaagagaaggattcacattaggagtgcatgatattcttgtccaaaaatcagca
gatgaaaaaagagcaaaaattatcgcagaaaccagaaaggttggtcctaaagcaagtgca
gaagctgttaacctaacagaagaagccgatgctgaagaagtaactgaggctgtggagttg
gcacatagtacaaatcccaaattccgggcaatcattgacagaaaatacaaagaagcctta
aataactataccaacagaataaacaagacttgtttaccagccggtttgctatgcaagttc
ccctacaataatttgcaactgatggtccagtcgggtgcaaaaggttccacggtcaacact
atgcagatctcttgtcttttgggccagattgaattggagggtaaaaggccacctgttatg
atctcagggaagtctttgcccagttttcctgcttatgagccttcaccaagggccggtgga
tttattgatggccgattcatgacagggattcaaccgcaggagtttttcttccattgcatg
gctggccgtgagggtctgattgataccgccgtcaaaaccagtagatcaggttatctccaa
agatgtttgatcaaacatttggagggcttgacagttaaatatgacctgacagtccgcgac
agtgacaatagtgtgattcaatttttgtatggggaagatggaatggatatttccaaagtt
caatttttgaacaaaaagctaattccatttttgaatgataattctgatgtcatcttgaac
aagaaaattgttgaaaagttcaatgaagaaggtgttcctgaagatttgacacaaactatt
aaacaggtaagtaagcgcttaaaacgttggaagcgcaaatacggcgatcccttacaaaaa
gacagaacaagtccattcgcgcagtactccagaaaatatttgccggaaaaagacagcatc
gagtcggcccaaaaaaaatccaaaatgaccggcagaacccggttgaccaaaaaggtcatc
aaaatgtggcgtgcgatccctaaagaagaaaaagaaaaattgaaagccaagttgaaaaac
atgtgtccggatcccctgatctcaaaataccaacccgatcactactttggggtaataaac
gaaaatttggagaacttgatgaaggattatttggataaacagaatgttaaggaggatttt
gaggatatgatcaagtataaagcgatgaccactttatgtgaacccggtgaacccgtaggc
ctcctagcagcccagtctgtgggcgaaccgtctactcaaatgacccttaacactttccat
tttgctggcagaggtgaaatgaacgtcactttgggtattcctcgtctcaaagaaatctta
atgactgccagtaaagacatcaaaaccccttgcatggatatccctttcagagaaaatgta
gccaaacatttttccgaaaccgaacgcctcaggaagaggttggtgagggttacgattgcc
gaagttttgaagaaggtccaagtgcatcggatagtcaccggtgcgaggaataaaatgcac
aagtattcggtaaagtttgagtttttgcctcatggtgcttataagaacgatttttgtgtg
aaaccgaaggggatcatgaagtttatggagcagaagtattgtccttcgctgatgagggcg
attgtgaagtcttctaatagcaaacaaatgttaattgtggacgaaaaacaaaaatccaaa
agaaataaaaaagacaatgatgatgaaaatgaagacaaggctgcgaagaaatcagggtac
aagacttttggagaagactatgctacgtctgatgaagatgagggacttggtgatgatgaa
gatgcgacaaacgctcgaaaaagatctaggaagaaggatgatcaggaatacgatgtgtct
gaagatgaacagaatgatgttacgtcagaagatgatatggatgaagattcaaatgaatcc
aagaacttggagaatggtaatgatgccgatgatgtcaaaaccgaaatgtgcgatgatggt
ttcagttttgatgagacgaacttcttgtggtgcaaatatgttttcacggccttgctgaaa
agccgtcatttgggaaacaccgatattaaacgagccataacttaccagaacaacgacggc
gaacttgttcttaaaactgatggcatcaatattgttgaaatgttcaaatacaatgatcta
ctagatttaaacaaattatactcaaacgacgtccattgcatcgcccaaacttccggcatt
gaagccgctagccgagtgatagtaaaggaggtgcaaaacgtgtttcaacgtttacgaatc
actgtagaccctatacatttattactgatcgcagattacatgacatactacgganctttc
caacccttgagcagaaccgggttggaaacatcggtgtcacctttgcagcaaatgagttat
gaatcttcattgacgttcttgaacaagcgctaccataaaaggtaa
DBGET
integrated database retrieval system
