Corynebacterium freiburgense: CFREI_06745
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Entry
CFREI_06745 CDS
T09215
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
cfg
Corynebacterium freiburgense
Brite
KEGG Orthology (KO) [BR:
cfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cfg03051
]
CFREI_06745 (pafA)
Enzymes [BR:
cfg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
CFREI_06745 (pafA)
Proteasome [BR:
cfg03051
]
Prokaryotic proteasome
Bacterial regulatory particles
CFREI_06745 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
WJZ02635
LinkDB
All DBs
Position
complement(1447555..1448973)
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AA seq
472 aa
AA seq
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MVRRIAGVETEYGITCTFDGRRRLGPEEIARYVFRPIVDTYGSANVFLPNAGRLYLDVGS
HPEYATPECDSIAQLLTYDKAGDQIVDQLAQQAEISLAQEGIAGQVFLFKNNVDSFGNSY
GCHENYLVSRSTVLRTLGNVLLPFLITRQLLVGAGKIYRPLVRSEQDPFGLGYCISQRAD
HVWEGVSSATTRSRPIINTRDEPHADSRQYRRLHIIVGDSNMAEPTFALKIGSTLLVLEL
IEAGWPLPDFALENEIASIREIARDTTGNTPIRLRNGNQVSALEIQRAYCDAATQWLKQR
PQRASGVLDSDLHRVVDLWDRVLRAIETQDFSAVDTEIDWVIKRKLLERFQHRHGFELDH
PKLLQVDLAYHDVRQGRGLYSVLESKGLVQRWIDPAGITQAASGVAPQTTRAKLRGEFLS
AAYDLQASVTVDWMRLKVNRPEPISVELGDPFATIDDRVDELIEYMKTQRGI
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggtccgtcggattgccggcgttgagacggagtacggtattacatgtacgtttgatggg
cgtcgtaggttggggcccgaagaaatcgcccggtatgtctttcggcccatagtggatacc
tatggcagcgcaaatgtgtttttgccaaatgcgggacgtttgtaccttgatgttggctcg
cacccagaatatgccacacctgaatgcgatagcattgcgcaattgctcacttacgataaa
gcaggggatcagattgttgatcaattggcgcagcaagcggagatttcattagcgcaagaa
ggcattgctggccaggtgtttttatttaaaaacaatgtggattccttcggtaattcatac
ggctgccatgaaaattaccttgtgagtcgatccacggtgctacgtacactaggcaatgta
ctactaccgtttttaattacccgccaactccttgtgggggccggaaaaatctaccgacca
ttagtgcgctccgaacaggatccttttggccttgggtattgcatttcacagcgtgcagat
catgtgtgggaaggtgtttcgtcagcaactacacgatcgcgccccattattaatactcgt
gatgaacctcatgcggattcacggcaataccgaaggctacatattattgttggtgattct
aatatggcggagccaacctttgcactaaaaatcggttcaacactgcttgtgctagaactt
attgaggccggctggccacttccagatttcgcattagaaaacgaaattgcatcaatacgg
gaaatcgcacgtgacaccacaggcaatacgccaatccgattacggaatggaaatcaagtt
tcagcactggaaattcaacgtgcctattgtgatgcggctacacagtggctaaaacaacgc
ccacagcgtgcttcgggggtattggattctgatttacatcgtgttgttgatctttgggac
cgagtacttcgggccattgaaacccaagatttctctgcggtagatacggaaatcgattgg
gtgattaagcgtaaactgctagagcggttccagcatcgtcatggttttgagcttgaccat
ccaaagcttttgcaagtggatttggcgtatcatgatgtgcgtcaaggtcgcggtctttat
tcggttttggagtctaaagggttggtgcaacgctggattgatcctgccggaattacccag
gcggcaagcggggtcgcacctcaaactactcgagcaaaactgcgtggggagtttttatcc
gcagcatatgatctgcaagcttcggtgactgtggattggatgcggttaaaggtaaatcgt
ccagagccaatctcggtagagcttggggatccttttgcaactattgatgatcgtgttgat
gagcttattgaatatatgaaaactcagcgaggtatatag
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