Chitinophaga filiformis: MYF79_03570
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Entry
MYF79_03570 CDS
T08225
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cfil
Chitinophaga filiformis
Pathway
cfil03030
DNA replication
cfil03410
Base excision repair
cfil03420
Nucleotide excision repair
cfil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MYF79_03570 (polA)
03410 Base excision repair
MYF79_03570 (polA)
03420 Nucleotide excision repair
MYF79_03570 (polA)
03440 Homologous recombination
MYF79_03570 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfil03032
]
MYF79_03570 (polA)
03400 DNA repair and recombination proteins [BR:
cfil03400
]
MYF79_03570 (polA)
Enzymes [BR:
cfil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MYF79_03570 (polA)
DNA replication proteins [BR:
cfil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MYF79_03570 (polA)
DNA repair and recombination proteins [BR:
cfil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MYF79_03570 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MYF79_03570 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH_2
OpuAC
Motif
Other DBs
NCBI-ProteinID:
UPK70371
LinkDB
All DBs
Position
851805..854627
Genome browser
AA seq
940 aa
AA seq
DB search
MQKKLFLLDAMALIYRAYYALIRNPRLTSTGRNTNAQFGFTSTLLDLINKEKPTHMAVAF
DTHAPTERHSTFVDYKANRMDAPEDILDSLDDIKRIITGFNIPVVELDGYEADDVIGTLA
WQAADAGYSVYMVTPDKDYGQLVRENVFIYKPPYMGNKEEILGPKEVCEKWQITDVHQVI
DILGLMGDAVDNIPGIPGVGEKTAMKLLSQYGSVEGVIENADKIGGKMAEKIKAGAESAI
LSKQLATIITNVPVSFHEEDFCIKPANKEQLSEVFTELEFKTLGKRILGDGFATAATMEP
ASPAKAQLDLFGNEIQGAAPPPSEEAQETPVSVLVAEKNINNTPHNYLLADTPEKRKELL
ELLLQQQEVSFDTETTGTDANAVELVGMSFSVKAGEGWYIPVPSDRAQAQEIVDSFRPLF
DTTHILFIGQNIKYDMIVLKWYGVEIKGPVFDTMLAHYLIEPEGRRGMDLLSAQYLQYEP
VSIETLIGKKGKGQGNMRDVEIEKIKDYAAEDADITLQLKEKFAPLLPLKAVEKVFYEVE
NPLVKVLTDMEYEGIALDIQALSDYSRELEKEIRRAEESVYTQAGVRFNLASPKQLGEVL
FEKLMLDPKAKKTRTGQYATGEDVLAKLSSKHQIVEDILVFRELSKLKSTYVDALPLMLN
KRTNRVHTSYNQAVAVTGRLSSNNPNLQNIPIRTDRGREVRRAFVARNEEYVLLSADYSQ
IELRIIAAISEDVHMIEAFQQGLDIHAATAAKVYGVELTDVTPEMRRNAKSVNFGIIYGV
SAFGLSENLGIARGEAKTLIDNYFAQYPSIKQYMDNQIKSAQLNGYVETLLGRKRWLKDI
NSSNAVVRGYAERNAINMPIQGTAADMIKLAMIAIHKRLKQENLRSRMILQVHDELVFDV
YKDELELIKPLIAEGMRNALPLAVPVEVEIGTGINWLEAH
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagaaattgtttttactggatgcaatggcgctcatctatcgcgcctattatgca
ttgatcagaaatccacgcctcaccagcaccgggaggaataccaacgcgcagtttgggttt
acttctaccttgctggaccttatcaataaagaaaaacccacccatatggcagtggcgttc
gacacgcacgcgcctacagaaaggcattccacctttgtcgattataaggctaaccgaatg
gatgctccggaagacattctggactccctcgacgatatcaaacgtattatcaccgggttc
aatattcccgtcgtagagctggacggctatgaagcagatgacgtgatcggcacccttgcc
tggcaggcagcagatgccggttacagtgtttacatggtaacgccggataaagactacggg
cagctggtaagggaaaatgttttcatctataaaccgccctacatgggtaacaaggaagag
atccttggccctaaagaggtgtgtgaaaaatggcagatcacggatgtacaccaggttata
gatatattgggcctgatgggagatgcggtggataacatccccggcattcccggcgtagga
gagaagaccgccatgaaactgctttcccagtacggctctgtagaaggagtgatcgagaat
gctgacaagattggtggaaagatggcggaaaagatcaaagccggcgcagaaagcgctatc
ctttccaaacagctggccaccattatcaccaatgtaccggttagcttccatgaggaagat
ttctgcatcaagccagccaataaggagcaattgtcagaagtatttactgaactggaattt
aaaaccctcgggaaacgtatactcggagatggctttgctaccgcagccactatggaaccg
gcctctccggccaaagcacagctggacctgtttggcaatgagatccagggcgccgcgccg
cctccttctgaggaagcccaggaaacacctgtaagcgtgctggttgcggaaaaaaacatc
aacaatacgccgcataactatctgctggccgatacgccggaaaaaaggaaggaactgctg
gaactgctgttacaacagcaggaggtctctttcgatacggaaacgacaggtactgatgcc
aatgcggttgaactggtcggtatgagcttttccgtcaaagcaggagaaggctggtatata
cccgtaccatcagatagggcacaggcacaggaaatagtagatagtttccgtccgctgttc
gacaccacgcatatcctcttcatcggtcagaatatcaaatacgatatgatcgtgctgaaa
tggtatggtgttgaaataaagggccctgtcttcgataccatgctggcccactatctcata
gagccggaaggccgccgtggaatggacctgctcagcgctcagtacctgcaatacgagccg
gtgtctatcgagacgctgatcggcaagaaaggaaaggggcagggtaatatgcgggatgtg
gaaatcgaaaagatcaaggactatgcagcagaagatgccgacattaccctgcagctgaag
gagaaattcgcgccattactgcccttgaaagcggtggaaaaagtgttctatgaagtagaa
aatccgctggtgaaagtgctgaccgatatggaatatgagggtattgccctcgatatacag
gcactttccgattactcgcgcgagctcgaaaaagagatcaggcgtgcagaagaaagcgtt
tatacacaagccggggttcgtttcaacctggcctcaccgaaacaattgggagaggtactg
tttgaaaaactgatgctcgatcctaaagccaaaaagaccagaacaggacagtatgccacc
ggtgaagatgtgctggcgaaattatcctccaagcatcagatcgtagaagacatcctggta
ttccgtgaattgagcaagctgaaatcaacttatgtggatgcgcttccgctgatgctgaac
aagcggaccaaccgcgtgcatacctcctacaaccaggcggtagctgtaaccgggcgtctc
agttccaacaaccctaacctgcagaacattcccatccgtaccgacagaggcagggaagtg
cgtagagctttcgttgcacggaatgaggaatatgtattactgtctgccgattactcccag
atcgagctgcgtattattgccgccatcagcgaagatgtacacatgatcgaggcctttcag
caagggctcgatattcacgcggctaccgccgcaaaggtatacggtgtggagctgacggac
gtaacaccggaaatgcggcgtaacgccaagagcgtaaacttcggtatcatctatggtgta
agtgccttcgggctttccgaaaacctgggcatcgccaggggagaggctaaaacactgata
gataactactttgcacagtatccgtccataaaacaatatatggacaaccagataaagtct
gcacaactgaatggttatgtagaaacattgctgggccgcaagcgctggctgaaggatatc
aattcctccaatgccgtagtcaggggctatgcagaacgaaatgccatcaacatgccgata
cagggtaccgctgccgacatgatcaaacttgccatgatcgccatccataaaaggctgaaa
caggaaaatctccgctcccgcatgatcctgcaggtgcatgatgagctggtcttcgatgtg
tacaaagatgaactggaactgatcaagccattaatagcagaaggtatgcgcaacgccctg
ccactggcggtacctgtcgaagttgaaataggtactggcatcaactggctggaagcgcat
taa
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