Colletotrichum fioriniae: CFIO01_00429
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Entry
CFIO01_00429 CDS
T04796
Name
(GenBank) RNA polymerase Rpb1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CFIO01_00429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfj03021
]
CFIO01_00429
Enzymes [BR:
cfj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CFIO01_00429
Transcription machinery [BR:
cfj03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
CFIO01_00429
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
EXF75944
UniProt:
A0A010RDV0
LinkDB
All DBs
AA seq
1456 aa
AA seq
DB search
MATTTTVTPVKSQLVDKLPKRFRGIKFGIQSNQDIANQAVLEVSDRLLYDIEKNRAPYQH
GPLDPRLGTSSKTGKCSTCEESLQNCTGHFGHVRLPLPAFHIGYLRFVMMILQDICKDCG
KVLLTESEKRSFLKELRRPLLDNLRRTQICKRINEQCRKVKNCMYCGSVQGQIRKVGVLK
LAHDKFVTYNKSTSAKKIPPESKIKFDESFAEARKNNGELDKHLRKAMEDMNPLRVLNLF
KMISPTDCELLGLDPAEGRPEMFIWQFLPAPPVCIRPSVAQDNASNEDDITTKLADIVWV
SGMIRSALQKGSPVQTIMEQWEYLQLQVAMYVNSDVPGLQQPGFGKAVRGFCQRLKGKQG
RFRGNLSGKRVDFSGRTVISPDPNLGIDQVAVPQLVAKNLTYPERVSDYNIKKLKECVRN
GPSIWPGAQQVIKNDEGGYKISLKFGNRNQVAQDLKIGDVVERHLEDNDIVLFNRQPSLH
KLSIMSHLVKVRPWRTFRLNECVCGPYNADFDGDEMNLHVPQTEEARAEAINLMGVKHNL
ATPKNGEPVIAATQDFITAAYLLSSKDNFFDRKTFTYICMHMMDGKVHLDLPPPAILKPK
ALWTGKQVFSMMMRPNKDSPVKINLDAKCREYKARAGQCPDMDPNDGWLVIRNSEVMCGV
MDKSTVGSGKKDSVFYVILRDFGPDAAVVTMNRLAKLCARHLTNRGFSIGIGDVFPTEKL
LERKSTLVKGASIEVDVLIDKYKKNKLDKATGCSMEETLENSISGLLSKVRTQAGSHCIE
TLSKNNAPLVMAKSGSKGSEINVAQMVALVGQQIIGGKRVADGFQDRTLPHFHKNAPQPP
SKGFVENSFYSGLLPTEFIFHAMSGREGLVDTAVKTAETGYMSRRLMKSLEDLSTQYDDT
VRTSGGGIVQFQFGADKLDPVDMEASAKPVNFDRTFSHAENLTWDNDEAALLPNEMVKLC
DNLLARERARYPRKSLLGDLTLDYDNEEERYTDEHEGARDFLRSLESYIAGRANKLARVM
ELTGLTANADSMDVDIDEDEVKAKKAFADKVAKMSETTLRLFVKLCLEKYKKAHVEPGHA
VGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQGVPRIKEIINASKTISTPVITCPLMQN
REMTAAKIVKARIEKTYVEDILSYIEDEWFAESGSVVLKVDMDALSDMQLGITLGDVAEA
ICKHKKMKVSRSDMHIGAGRIEIRVRLDESAASKRSVKAKPVDELGDLLVRANYLRRTIP
TVAISGYPEATRAIIQSSEDETHTVLVEGYGLLACMNTEGVEGRKVKSNNIMECRDVLGI
EAARSTIAFEIGEVMGDMGIDPRHMQLLADVMTYKGEVLGITRFGLSKMRDSVLQLASFE
KTPDHLFEAAAGMKTDQIEGVSECIIMGQTMTVGTGAFHVVRRLAMERGDVGQRKTIFED
AWAAQTALKRKTRRNV
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaccaccaccgtgactccggtcaagtcgcagcttgtcgataagctgcccaag
cgattcagaggcatcaagtttggcatccagtcgaatcaagatatcgcgaaccaagccgtc
cttgaagtttccgatcgcctcctgtacgacatcgaaaagaacagagccccatatcagcat
ggtcctcttgacccccgtcttggtacctcgagcaagacaggcaaatgttcaacatgtgag
gaatcgctgcaaaactgcacaggccatttcggccatgtccgacttcctctaccagccttc
cacattggctacttgcgcttcgtcatgatgatattgcaggacatctgcaaggactgcggc
aaagtactactcacagagagcgagaagagatcgtttctcaaggagctgaggcgacccctg
ctcgacaacctgcgacggacgcagatctgcaaacgaatcaacgagcaatgtaggaaggtc
aagaattgcatgtactgcggttccgtccaaggccagattaggaaagttggtgttcttaag
ctcgcccacgacaagtttgtcacatacaacaagtctacttcggccaagaagatccctccc
gagagcaaaatcaagttcgacgagtcctttgccgaggccagaaagaacaatggcgagctg
gacaagcacttgcgcaaggccatggaggatatgaatcccctgagggttctcaatcttttc
aagatgatcagccccaccgactgcgagcttcttggcctggatcccgccgagggccgtccc
gaaatgttcatctggcagttcctccctgcgcctcccgtgtgcattcgaccgtcagtagcc
caggacaacgcgagtaacgaggacgacattacgacaaagctggcagacattgtctgggtt
agcggcatgattcgttcggcgctacaaaagggctcgccagtccagactattatggagcaa
tgggagtatctccagctccaggttgccatgtatgtcaacagtgacgtgccaggtctgcaa
cagccgggattcggcaaggctgtgagaggtttctgtcagcggttgaagggaaagcagggt
cgattccgtggcaatttgtccggaaagcgtgtcgacttctctggacgaaccgtcatttct
cccgatcccaaccttggcatcgaccaggttgctgttccgcagctcgtcgctaagaacttg
acctacccggagcgagtgtcagactacaacattaagaagttgaaggaatgcgttcgcaac
ggtcccagcatctggcctggcgctcagcaggtcatcaagaacgatgagggaggctacaaa
atctccttgaagttcggtaacaggaaccaggttgcccaggatctcaaaatcggtgatgtc
gttgaacgccatctggaagacaacgacattgttcttttcaaccgtcagccgtctctgcac
aagctcagtatcatgagtcacttggtgaaagtgcggccctggaggacattccgcctcaac
gagtgtgtgtgcggcccctataacgccgatttcgatggtgatgagatgaatcttcacgta
ccgcagacggaggaagctcgcgctgaggccatcaacctcatgggcgtgaaacacaacctg
gcgacgcccaagaacggagagcccgtcattgcggctacgcaagatttcatcaccgccgcc
tacctcctaagcagcaaggacaatttcttcgaccgcaagacattcacttatatttgcatg
cacatgatggacggcaaagtccacctcgacttaccccctccagccattctgaaacccaag
gctttgtggaccggcaagcaggtcttcagcatgatgatgcgccccaacaaagacagccct
gtcaagatcaaccttgacgccaagtgcagagaatacaaggcgagagcagggcaatgcccc
gatatggatcccaacgacggatggttggtgattcgcaactccgaagtcatgtgcggtgtc
atggacaagtcgacggtcggatcaggaaagaaagattcagtgttttatgtcatcctgcga
gatttcggtcccgatgcggccgtggttacgatgaaccgacttgccaaattgtgtgcgaga
catctcacaaatcgaggcttctccatcggtatcggtgatgtcttccccacagagaaactg
ctcgagagaaagagtacgcttgtcaagggtgcgagcattgaggtcgatgtcctcattgac
aagtacaagaagaacaagctcgacaaggctaccggttgcagcatggaggagacgctagag
aactccatttcgggtcttctcagtaaggtcagaacgcaggctggttctcactgtatcgag
acgctcagcaaaaacaacgccccgctagtcatggccaagtctggatccaagggttcagaa
attaacgtggcccagatggttgccctagtcggacagcagattattggtggcaagcgtgtc
gccgatggtttccaggacagaacgcttcctcacttccacaagaacgcgcctcagccgccg
tccaagggattcgtcgagaacagtttctactctggtctcttgcctaccgagttcattttc
cacgccatgtctggtcgtgaaggtctggtcgataccgccgtcaagacggccgaaactggt
tacatgtcacgcagactgatgaagtctctggaagatctgtcaacgcagtatgacgatact
gtgcggacttccggcggtggtatcgttcagttccagttcggtgccgacaagctggacccc
gtcgacatggaggcctctgcgaagcctgtcaactttgaccgaaccttttctcacgccgag
aatcttacctgggacaatgacgaggctgcattgctccccaacgagatggtcaagctctgc
gacaacttgcttgctcgggaacgcgcgcgctatcccagaaagtccttgttgggtgatctg
actcttgattacgacaacgaggaagaaaggtacacagacgagcacgaaggcgccagagac
tttttgcgatcattagagtcctacattgccggacgagctaacaagcttgcccgtgtgatg
gagctcaccggcctgacagccaacgctgacagcatggacgtcgacattgatgaggatgag
gtcaaggccaagaaggcctttgccgacaaggtcgccaagatgtccgagacgacattgcga
ctcttcgtcaaactgtgtttagaaaagtacaaaaaggcgcacgtcgagcccggacatgcc
gtcggagctgttggtgcgcagtctattggtgagcccggtacgcagatgacgctgaagact
ttccattttgctggtgtcgccggtatgagtatcacccagggtgtacctcgtatcaaggaa
attatcaacgcctccaagactatcagtacacccgtcatcacctgcccgttgatgcagaac
agggagatgacagccgcgaagatcgtcaaggcgcgtatcgaaaagacgtacgttgaagac
attctgagctatattgaggacgagtggttcgccgagtcgggaagcgtcgtactcaaggtt
gatatggatgccttgtctgacatgcaactcggcattaccctgggcgatgtggccgaggcc
atttgcaagcacaagaagatgaaggtgtcgcggtccgatatgcacattggcgctgggaga
atcgagattcgcgtccgcctcgacgagtcggcggcttccaagcgatctgtcaaggccaag
cccgtggatgagcttggcgacctgttggtgcgagccaactacctccgccgaacgatcccg
accgtggccatctcgggttaccccgaggccactcgtgccattatccaatcgtccgaggac
gaaacccatactgttctggtcgaaggctacgggcttctcgcttgcatgaacacggagggt
gtcgagggacgaaaagtcaagtccaacaacattatggagtgcagagacgtcctgggtatc
gaggccgcaagaagcacgattgcctttgaaattggcgaggtcatgggagacatgggtatc
gacccgcgtcacatgcagctgcttgctgatgtcatgacatacaagggcgaggtccttggt
atcacacgattcggactgtccaagatgagagacagtgttctccagctggcctcgttcgag
aagacgccggaccatttgttcgaggcggcggccggtatgaagacggatcagattgagggc
gtgagtgagtgtatcatcatgggccagaccatgactgtaggaaccggcgcgttccacgtg
gtgcgccgcctcgccatggagaggggggacgttggacagcgcaagactattttcgaggat
gcatgggccgcacagacggcactcaagcgcaagacgaggcggaatgtttaa
DBGET
integrated database retrieval system