Colletotrichum fioriniae: CFIO01_12874
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Entry
CFIO01_12874 CDS
T04796
Name
(GenBank) RNA polymerase Rpb3/RpoA insert domain-containing protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03020
RNA polymerase
cfj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CFIO01_12874
09124 Replication and repair
03420 Nucleotide excision repair
CFIO01_12874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfj03021
]
CFIO01_12874
03400 DNA repair and recombination proteins [BR:
cfj03400
]
CFIO01_12874
Transcription machinery [BR:
cfj03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
CFIO01_12874
DNA repair and recombination proteins [BR:
cfj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
CFIO01_12874
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
PriA_CRR
Motif
Other DBs
NCBI-ProteinID:
EXF85604
UniProt:
A0A010S4L8
LinkDB
All DBs
AA seq
339 aa
AA seq
DB search
MDYEPMLLDGESGGPSIKISGADNIHVNFDLSNCDLSFANSLRRVIQAEVPVIAIDLVEI
EANTSVLADEFIAHRLGLIPLQSKDVNSLLYTRDCDCEQYCDNCSVKLTLHARCSSDETM
KVYASDLIVDSFRQNGTVGNPVILDPEGQGSLIAKLRKGQELKVSCIAKKGIAKEHAKWM
PTSAVGFEYDPHNKLHHLDMWFEEDAKAEWPESKYAKMEDPPQEGEAFDYDALPGKFYFE
VEGVGSLEPDQIIQEGIKILQEKLALTLHILTGEADDDGMGDFDGPRSPNLDMDGGNPWQ
DQGYTTPFNGGNQTAWGGNATTPYTTTTPYGASGQSGWN
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggattacgagccgatgctgttggatggcgagtccggaggaccatcgatcaagatctca
ggggctgataacatccacgtcaactttgatctctcgaactgcgacctctccttcgccaac
tcgctgcgtcgcgttatccaggccgaagtcccagtgatcgccatcgacctggtcgaaatc
gaggccaacacatctgtcctcgccgatgagttcatcgcccatcgcctgggtctaattccc
ctccagtccaaggacgtcaacagcttgctttacacccgagactgcgactgcgagcagtat
tgcgacaactgcagcgtaaagctcacgctgcatgcgcgatgctcgtcagacgagaccatg
aaggtctacgctagcgatcttattgtcgacagctttaggcagaacggcacggtgggaaac
cctgtaatcctcgaccctgaaggacaaggctctttgattgccaagctgcgcaaagggcag
gagcttaaggtgtcatgcatcgcgaagaagggtattgcaaaggagcatgcaaaatggatg
ccgacgtcggccgttgggtttgaatacgaccctcacaacaagctgcaccacctggacatg
tggttcgaagaagatgccaaggccgaatggcctgagagcaaatatgccaagatggaggat
cccccacaagaaggcgaagccttcgactacgacgcgctccccggcaagttctactttgag
gtcgaaggtgtaggcagtctggagccggatcagattatccaagaaggaatcaagattttg
caggagaagttggctctcacgctccacattctcacaggtgaagcagatgacgatggcatg
ggcgactttgatggacctcgcagtcccaacttggacatggacggcggcaacccctggcaa
gatcaaggctacaccactcctttcaacggcggcaaccagactgcgtggggaggcaacgca
acgacaccctacaccacaacgacaccttacggcgcctccggacagtctggatggaactga
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