Clostridium formicaceticum: BJL90_16255
Help
Entry
BJL90_16255 CDS
T05005
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cfm
Clostridium formicaceticum
Brite
KEGG Orthology (KO) [BR:
cfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfm03009
]
BJL90_16255
Enzymes [BR:
cfm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
BJL90_16255
Ribosome biogenesis [BR:
cfm03009
]
Prokaryotic type
ribosomal protein modification factors
BJL90_16255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
TMF_TATA_bd
MADF_DNA_bdg
NAGidase
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
AOY77264
LinkDB
All DBs
Position
complement(3495447..3496787)
Genome browser
AA seq
446 aa
AA seq
DB search
MNLSVYLESLGCSKNLIDAEVMLGLLNKYGYKLTNDKLKADVIIVNTCGFIESAKEESIN
KIIEMGELKKDKLKLLIISGCLGERYASELLKELPEVDAIVGTGNYNEIIEIIHESIKGN
KIVRIGNVDSIYDESLPRFQTTPTHSAYVKISDGCDNYCTYCIIPKLRGKYRSRKMESIV
EEVQQLAENGVKEIILIAQDTTRYGIDLYGEYKFSHLLQQLNEIKGIQWIRLLYCYPEMI
TDKLIETIAKYNKICKYIDMPIQHCSDEILKKMNRRTNKESLVKTINKLRKEVPEIVIRT
SLIVGFPGEEENHFNELLEFVEEMKFDRLGVFMYSQEENTAAAKMPNQVAEDIKEQRQKR
IMEIQQKISLDKNNEKISKILEVLVEEELEGSGEYLGRTKGDAPEIDGLVYIQTKTPIAI
GDIVPVKITSALEYDLIGEKVDEFSE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaagcgtatacttagaatcccttggatgttctaaaaaccttattgatgcagaa
gttatgttaggtttattgaataaatatggatataagttgaccaatgataaattaaaggct
gatgtaattattgtaaatacctgtggatttattgaatctgctaaagaagaatctattaat
aagattattgaaatgggagaactaaaaaaagacaaactaaaattattgattatttctggg
tgcttaggagaaagatatgcaagcgaattattaaaggaattacctgaagtagatgccatt
gtcggtactgggaactataatgaaattatcgaaatcattcatgaaagtataaagggaaat
aaaattgttcgcataggaaatgtagatagtatctatgatgaatctctgccaagattccaa
accacccctacccacagtgcctatgttaaaatttctgatggttgtgataattactgcacc
tactgcattattccaaaattaaggggtaaatatagaagcaggaaaatggaaagtattgta
gaagaggtgcagcagttagcagaaaatggtgtaaaagaaatcatcttaattgctcaagat
actacaagatatggcatagacttatatggggagtataaattttctcatttattacaacag
ttgaatgagataaagggtattcagtggattcggttactctattgttaccctgaaatgatt
acagataaattaatagaaactattgcaaaatataataaaatatgtaaatatattgatatg
cctatacagcactgcagtgatgaaattttaaagaagatgaatcgcagaacaaacaaagag
agcttagtaaaaacaatcaacaagctaagaaaagaagtaccagagatcgttattagaaca
tccttgattgtgggttttcctggagaagaggaaaatcattttaatgaattattggagttt
gttgaagaaatgaagtttgatagactaggcgtatttatgtattctcaggaggagaataca
gcagctgctaagatgccaaatcaagtggcagaagatataaaagaacagcgacaaaagagg
attatggagatacagcaaaaaatttctcttgataaaaataatgagaaaatcagtaaaata
cttgaggttttagtagaagaagagctagaaggaagcggtgaatatctaggaagaactaag
ggtgatgcaccagaaattgatggtttggtatatattcaaacaaaaacaccaatagcgatt
ggtgatattgttccggttaagataacaagtgctctagagtacgatttgattggagagaaa
gtggatgaatttagcgaatag
DBGET
integrated database retrieval system
