Camponotus floridanus (Florida carpenter ant): 105250715
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Entry
105250715 CDS
T03919
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03020
RNA polymerase
cfo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105250715
09124 Replication and repair
03420 Nucleotide excision repair
105250715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfo03021
]
105250715
03400 DNA repair and recombination proteins [BR:
cfo03400
]
105250715
Enzymes [BR:
cfo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105250715
Transcription machinery [BR:
cfo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
105250715
DNA repair and recombination proteins [BR:
cfo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
105250715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
105250715
NCBI-ProteinID:
XP_011255261
UniProt:
E2AC10
LinkDB
All DBs
Position
Unknown
AA seq
1906 aa
AA seq
DB search
MATSDSKAPLRTVKRVQFGILSPDEIRRMSVTDGGIRFPETMEGGRPKLGGLMDPRQGVI
DRNSRCQTCAGNMTECPGHFGHIDLAKPVFHVGFITKTIKILRCVCFYCSKLLVSPHNPK
IKEIVMKTKGQPRKRLAFVYDLCKSKSICEGGDEMDINKENAENQPQMDRKPGHGGCGRY
QPNLRRSGLDVTAEWKHVNEDSQEKKMILSAERAWEILKHIKDEESFILGMDPKFARPDW
MIVTVLPVPPLSVRPAVIMYGSAKNQDDLTHKLADIIKSNNELLRNEQSGAAAHVILENI
KMLQFHVATLVDNDMPGMPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVI
TPDPNLRIDQVGVPRSIAQNLTFPEIVTPFNIDKMQVLVRRGNSQYPGAKYIVRDNGERI
DLRFHPKSSDLHLQCGYRVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLS
CTSPYNADFDGDEMNLHVPQSMETRAEVENIHVTPRQIITPQANKPVMGIVQDTLTAVRK
MTKRDVFIEKEQMMNLLMFLPSWDGKMPQPCILKPKPLWTGKQLFSLIIPGNVNMIRTHS
THPDEEDDGPYKWISPGDTKVMVEHGELVMGILCKKTLGTSAGSLLHICMLELGHDVCGR
FYGNIQTVINNWLLLEGHSIGIGDTIADPQTYLEIQKAIKKAKEDVIEVIQKAHNMELEP
TPGNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIAC
VGQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGL
IDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLCGETVEFQNLP
TIKVSNKAFEKKFKFDPTNERYLRRIFNEDIVREMMGSGEVISELEREWEQLNKDRAVLR
EIFPSGESKVVLPCNLQRMIWNVQKIFHINKRAPTDLSPMRVIQGVKDLLDKCIIVAGDD
RLSKQANENATLLFQCLVRSTLCTKCVSEEFRLSSEAFEWLIGEIETRFQQAQVSPGEMV
GALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGAA
ARDAEKAKNVLCRLEHTTLKKVTANTAIYYDPDPQNTVIAEDQEFVNVYYEMPDFDPTKI
SPWLLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDDN
KFQDTEEETVDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDSKKRIVITETG
EFKAIAEWLLETDGTSLMKVLSERDVDPVRTFSNDICEIFQVLGIEAVRKSVEKEMNAVL
QFYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLDAASHA
EVDPMRGVSENIIMGQLPRIGTGCFDLLLDAEKCKSGIEIPMAVGAGMGTAGMFFGSVTG
ISNSMSPQMTPWMGATPGYGASSMSPALSSGMTPGGACFSPSGASDASGLSPAYSAYSPQ
PGSPGSPGPSMSPFPMSPAGAASPSYSPTSPAYLPTSPSMTPSSPNYSPTSPTYSPTSPN
YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNY
TPASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSFAGTSPQYTPAS
PTYSPTSPTYSPTSPSYSPSSPQHTASGSTRYSPSSPNYSPSSPTYSPTSPQYSPSSTKY
SPTSPTYTPTSPSYSPTSPTYSPPVPGYSPTSPTYSPASPAYETDE
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atggctacgtccgattccaaagctcctttgcggacagtgaaacgcgtgcaatttggcatt
ctttcaccggatgagatacgtcgtatgtcagtcacagatggcggcatacgatttccagaa
actatggaaggcggccgccctaaattgggtggtctcatggatcctagacaaggcgtcatt
gacagaaattctagatgtcagacatgtgccggtaatatgacagagtgtcctggtcatttt
ggtcatatagatctcgcaaaaccagtatttcatgtaggatttattacaaagactataaag
atattgagatgcgtgtgtttctactgttccaaactacttgtcagtcctcataatccaaaa
atcaaagaaattgtcatgaaaaccaagggacaaccacggaaacgacttgcttttgtttac
gatttatgtaaaagcaagagcatttgcgaaggcggagacgaaatggatattaacaaagag
aacgcggaaaatcaaccacaaatggatagaaaacctggtcacggtggttgcggtagatat
cagcctaatctcagacgatccggtttagatgtcaccgcggaatggaagcacgtaaatgaa
gattcgcaagaaaagaagatgatactctcagctgagagagcgtgggaaattttgaaacac
atcaaagacgaagagtctttcatcttaggtatggatccgaaatttgctcgaccagactgg
atgatagttacggtactaccagtaccacctttatccgtcagacctgcggttattatgtac
ggttccgctaaaaatcaggacgatctgacgcacaaactggcggatatcattaaatcgaac
aacgagctattgcgaaatgaacagtcgggcgcagcggcacacgtgatcctagagaacata
aagatgctacaatttcacgtggcgacacttgttgacaacgacatgcctggtatgcctcga
gcgatgcaaaagtcaggcaaaccgctcaaggcaattaaagctcgtctgaagggaaaagag
ggcagaattcgaggaaacttgatgggcaagcgtgtggatttttccgcacgtaccgtcatc
acacccgatcccaacttgcgcatcgaccaagttggcgtgccgcgcagtatagcgcaaaat
ttgacgttccccgaaattgtaacgccattcaatatcgataagatgcaagtgttagttaga
cgtggcaattcgcagtatcccggcgcgaagtacatagttcgcgacaatggagaaagaatc
gatctgcgttttcaccccaaatcttcagatttgcacctgcaatgtggctatcgagtagag
cgacatatccgcgacggtgatctcgttatctttaatcgtcaaccgactttgcataaaatg
tcaatgatgggtcatcgcgtcaaagtgctgccgtggagtacgttccgcatgaatctgagc
tgcacatcgccgtacaacgcggattttgacggtgatgagatgaatttgcacgtgccacaa
tcgatggaaactcgcgcggaggttgaaaacattcatgtaacgccgcgacaaatcattacg
ccgcaggcgaacaagccagtcatgggtatcgtgcaggataccttgacggcagttagaaag
atgacgaagcgcgacgtgttcatcgagaaggagcaaatgatgaatctgctcatgtttctg
cctagctgggatggcaaaatgccgcaaccgtgtatcctgaaaccgaaaccattgtggacc
ggcaagcaattgttctccctcatcattccgggaaacgttaatatgatacgaacacacagc
acacatcccgacgaggaagacgatggtccgtacaaatggatatcaccgggtgatacaaaa
gtaatggtggaacatggggagctggtaatgggtatcctctgtaaaaagactctgggtacg
tccgccggttctttgcttcacatctgtatgcttgagctgggccacgacgtatgcggacgt
ttctacggcaatattcagaccgtcatcaataactggttgttgctggagggtcactcgatt
ggtatcggcgatactattgccgatccgcagacatatttggagattcagaaggcaattaaa
aaggccaaagaggacgtgatagaagtaattcagaaagcacacaatatggaattggaaccc
acacccggcaacacgttacgtcagactttcgagaatcaggtaaacagaattttaaacgac
gctcgagacaagactggaggttccgccaagaaatctctaacggaatataacaacttgaag
gctatggtagtatctggctcgaagggttccaacatcaacatttctcaggttatcgcttgt
gtaggtcagcaaaacgttgagggtaaacgaatacccttcggtttccgcaaacgaacgctc
ccacatttcatcaaggacgactacggacccgagtctcgaggttttgtcgagaactcgtat
cttgccggactcacgccgtcagaattctatttccatgctatgggtggtcgtgagggtctt
atcgataccgccgtgaaaacggccgagaccggttacatccagcgtcgtttgataaaggct
atggagtcggtaatggtgcattacgacggtaccgtgcgtaattcggtcggtcaattgatc
caattgcgttacggagaggacggtctctgtggtgagaccgtcgagttccaaaatctgccc
accatcaaggtgagcaacaaagccttcgagaagaaattcaaattcgatccgaccaacgag
cgatacttacgacgtatattcaacgaggacattgtacgagagatgatgggctctggtgag
gtaatctccgagctagaaagagagtgggagcaactgaacaaggaccgcgctgtgctacgg
gagatcttcccaagcggcgaatccaaggttgtattgccttgcaatctacagagaatgatt
tggaatgtgcaaaaaatattccacatcaataagcgagcaccgaccgatcttagtcccatg
agggtgattcaaggtgtaaaggatcttctggataaatgtatcattgtcgccggggatgac
agacttagcaaacaagcaaacgaaaacgcgacgttactatttcaatgcttggtgaggtct
actctatgtacgaaatgcgtctctgaggaattcaggctgtccagcgaagccttcgagtgg
ctgattggagaaattgaaactagattccaacaggctcaagtatcgccgggtgaaatggtg
ggcgcgttagcggcgcagtctctcggcgaacctgccactcagatgacactgaataccttc
cacttcgctggtgtatcatcaaaaaacgtcaccctcggtgtgccgagattgaaggagatc
atcaacatcagtaaaaaaccgaaagcgccgtctctcactgtgttcttgacgggcgcggcc
gcacgagacgccgagaaggcgaaaaatgtgctctgccgattggaacacacgacgctgaag
aaagtgacagccaacacagcgatatactacgatccagatccgcaaaacacagtgatcgcg
gaggatcaagaattcgtcaatgtatactatgaaatgcccgacttcgatcctactaaaata
tcgccatggttgctgcgtatcgaattagacaggaagcgaatgaccgacaagaagttgaca
atggaacaaatcgcggagaaaatcaatgccggctttggtgacgatttgaactgcattttc
aacgacgataatgctgagaagctggtgctgcggatccgaataatgaacagcgacgacaac
aaattccaagatacggaggaagaaactgtggacaagatggaagatgatatgttcctgcga
tgcattgaggctaacatgcttagcgacatgactttacagggtatcgaagctattggcaag
gtttatatgcatttaccgcaaacggactctaagaaacgtatcgttattacggaaacaggc
gaattcaaggctatcgcggaatggctcttggaaactgacggaacgagtttgatgaaagta
ttgagtgaaagagatgtagatccggtacgaacgttcagcaacgatatctgcgaaatcttt
caagttcttggtatcgaggccgtacgaaaatcggtggaaaaggagatgaatgcagtgtta
cagttctatggtctttatgtcaactatcgacatctcgctttactttgtgatgttatgacg
gcgaagggtcatcttatggcgataacacgtcacggaatcaatagacaagataccggcgct
cttatgagatgctcctttgaagaaactgttgacgtattattagacgccgcatctcatgcg
gaggtagatccaatgcgaggagtatccgaaaatattataatgggacaacttccgcgcatt
ggaacaggatgctttgacttattattggatgctgagaaatgcaaatctggcatcgaaatt
ccgatggcagttggcgcaggtatgggaacagcgggaatgtttttcggcagtgtaaccggt
atatccaatagtatgagtccccagatgactccttggatgggagctactcctggttacgga
gcatcaagtatgtctccggccttgagcagtggtatgacgccaggaggtgcttgcttctca
ccatcgggcgcatcagatgcgtcgggattgtcacccgcatattctgcttattcaccgcaa
ccaggaagtcctggcagtccgggaccgagcatgagtccgttcccgatgtcaccagcgggt
gcagcttcgcctagttactctcccacgtcaccagcgtatctgcccacgtctcccagcatg
acaccatcgagtccgaattactcgcccacaagcccaacatattcaccgactagtccgaac
tattcaccgacatcaccaagttactcgccgacgagtccgagctattctccaacatcgcca
agttattcaccgacaagtccaagttattcacccacttcaccaagttattcgccgacaagc
ccgagttattcgcccacgtcgccaagctattcaccaacaagccccagttattcacccaca
tcgcctagttattcaccgacctcaccaagttactcacccacgagcccgagctattcgcct
acgagtccaagttattcaccaacgagtccaagttactcgcctacaagtcctagctattca
cccacaagtccgagttactccccgacttcgccgagttattcacctagctcacctaattac
acacctgcttcaccttcatattcacccacctcaccgagttattcaccgagctcgccacag
tattcaccagcgagtccaagttactcgcccagcagtcccaagtactcgccaacgagcccg
agttattcacctacctcaccgtcgttcgctggtacatcgccgcagtacacaccggcgagt
cctacatactcgccaaccagtccgacttattctcccacgagtccgtcatactcgccgagc
tcgccacaacacaccgcgtctggcagcacccggtattcacccagcagtccaaattactca
cctagtagcccgacatattctcccacaagcccacaatattcaccgtcaagcactaagtat
tcacctacaagtcctacctacacacctacaagtccaagttattcaccgacgagtccgaca
tattcgccgccggtaccaggatattcgcctacgagtcctacgtactcaccggcatcgccc
gcttacgaaacagatgaataa
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integrated database retrieval system
