Collimonas fungivorans: CFU_1273
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Entry
CFU_1273 CDS
T01583
Symbol
dsd
Name
(GenBank) D-serine deaminase
KO
K01753
D-serine dehydratase [EC:
4.3.1.18
]
Organism
cfu
Collimonas fungivorans
Pathway
cfu00260
Glycine, serine and threonine metabolism
cfu00470
D-Amino acid metabolism
cfu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CFU_1273 (dsd)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CFU_1273 (dsd)
Enzymes [BR:
cfu01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.18 D-serine ammonia-lyase
CFU_1273 (dsd)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
D-ser_dehydrat
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AEK61105
UniProt:
G0AJH1
LinkDB
All DBs
Position
complement(1485359..1486687)
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AA seq
442 aa
AA seq
DB search
MNFDGGDSMTNVINYHSDYQNPLIDPLNKGLGAFQQALPAAEVKAHNWNLLREDLSLPTA
VLYEERMTHNLQWMQQFVTEYGVKLAPHGKTTMAPKLFARQLAGGAWGITLATAHQTRVA
RQHGVQRVIMANQLVGKQNMAIISDLLADPSFAFCCLVDSADGVDQLGAFFQARKQQLHV
LLELGPDGGRTGIRNPQQQEAVLAALARWPESLVLAGVEVYEGVLKEEADIRGFLQHAVA
CAKQLAKDGRFAARTAGSAAQPVILTGAGSAWYDVVAEEFAKTDIGLPLDVVLRPGCYLT
HDVGIYRAAQAQIQTRNPIARKMRTELLPALQLWAYVQSIPETGKAIIALGKRDAAFDAG
LPLPAAHYRPGSPAPTATPAHWQLTGMMDQHAYLQITEGDNIKVGDMIGFDISHPCLTFD
KWRQIAVLDPRHQVVDVIQTFF
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgatggaggagattcgatgacaaatgttattaactatcacagcgattaccag
aacccgctgatcgatcccttgaacaagggcttgggtgcattccagcaagcgctgccagcc
gccgaagtcaaggcgcacaactggaacctgctgcgtgaagacctgagcttgcctaccgcc
gtgctgtacgaagagcgcatgacgcacaacctgcagtggatgcagcagttcgtcacggaa
tacggcgtcaagctggccccgcacggcaaaaccacgatggcgccgaaactgtttgcgcgc
cagctggccggcggcgcatggggcattaccctggctaccgcccaccagacccgggtcgcc
cgccagcacggcgtgcagcgcgtgatcatggccaaccagctggtcggcaaacagaacatg
gcgatcatttccgatctgctggctgacccctcctttgcattctgctgcctggtcgactcg
gccgacggcgtcgaccagctgggcgcattcttccaggcgcgcaagcaacagctccatgtg
ctgctggaactgggccctgacggcggccgcaccggcatccgcaatccgcagcagcaagag
gcggtgctggcagcgctggcgcgctggcccgaaagcctggtgctggccggcgtcgaagtg
tacgaaggcgtgctgaaggaagaagccgatatccgcggtttcctgcagcatgcagtcgcc
tgcgccaaacagctggccaaggatggccgttttgccgcgcgcacagcaggtagcgcagca
cagccggtgatactgaccggcgccggttcggcctggtatgacgtggtcgccgaagaattc
gccaagaccgacatcggcctgccgctggacgtggtgctgcgtccgggctgctacctgacc
catgacgtcggcatttatcgcgccgcgcaggcgcagatccagacccgcaatccgatcgcc
cgcaagatgcgcaccgagctgctgccggccctgcagttatgggcttatgtacagtcgatt
ccggaaaccggcaaagccatcatcgcgctcggcaagcgcgacgccgcgttcgacgccggc
ctgcccttgcccgcagcgcattatcgcccaggcagcccggctcccacggccacgccggcg
cactggcagctgaccggcatgatggaccagcatgcgtatcttcagatcaccgaaggcgac
aatatcaaggtcggcgacatgatcggcttcgacatttcccatccttgcctgaccttcgac
aagtggcgccagattgcggtgctcgatccccggcaccaggtggtcgatgtgatccagacc
ttcttttaa
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