Collimonas fungivorans: CFU_3080
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Entry
CFU_3080 CDS
T01583
Symbol
soxA
Name
(GenBank) Sarcosine oxidase alpha subunit
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
cfu
Collimonas fungivorans
Pathway
cfu00260
Glycine, serine and threonine metabolism
cfu01100
Metabolic pathways
Module
cfu_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CFU_3080 (soxA)
Enzymes [BR:
cfu01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
CFU_3080 (soxA)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
CFU_3080 (soxA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
Pyr_redox_3
NAD_binding_8
FAD_binding_2
GIDA
DAO
HI0933_like
Thi4
XdhC_C
FAD_binding_3
AlaDh_PNT_C
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AEK62905
UniProt:
G0ACN1
LinkDB
All DBs
Position
complement(3618560..3621562)
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AA seq
1000 aa
AA seq
DB search
MSNQTHRLKDGGRIDRGAALGFTFNGKSYQGYQGDTLASALLANGVHFVARSWKYHRPRG
IVTAGVEEPNALVQLETGAYTVPNARATEIELYQGLNATSVNASPSIENDRMAVNQLFAR
FIPAGFYYKTFKWPRSWWGKYEEVIREAAGFGKAPTALDPDRYEKTYAHCDVLVAGAGPA
GLAAAWVAASSGARVVLVDDQPELGGSLLSGPAMIDGLPAAAWVAKITDDLRRLPEVTIL
SRSTVFGYQEHNLLTVTQRLSEHLPLAARGAVRERLWKVRAKHVILATGAHERPIVFGNN
DLPGIMLASAVSTYIHRYGVLPGRKAVIFTNNDDAYQTALDLKANGAEVTVVDPRPAGNS
SLPATARRQGINIVNDAVVVTASGSRHVKMVEVARHQDGVPGQFITSLACDLLGVSGGWN
PVIHLFAQSGGKAHWSNEKACFVPGSAMQKETSAGAANGDFSLSGALRDGALAAQQAIVA
VGLKPIVLPSWKVVELSEAAIMPLWLVGDRKQVGRGPKQFVDYQNDVSAADIYLAAREGY
HSVEHVKRYTALGFGTDQGKLGNINGMAILAEVLGKTIPQTGTTTFRPNYTPVTFGTVAG
RELGEFLTPIRKTCIHPWHQEQGALFEDVGNWKRPWYYPRGKEDLHAAVARECLAARNSV
GILDASTLGKIDVQGPDAVTLLNWMYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLG
EQHFLMSTTTGGAARVLDWMERWLQTEWPHLKVNLTSVTDHFATFAVVGPNARRVLQKVC
KDIDFSNEKFPFMSFREGSINSVFTRIMRISFSGELSYEVNVPANMGRAIWDAIIEAGKE
FDITPYGTETMHVLRAEKGYIIVGQDTDGSVTPFDLGMGGLVAKSKDFLGKRSLIRSDTA
RSDRKQLVGLLSEDKDVVLPEGSQILAEPSNEPIADMIGHVTSSYFSPILQRSIAFALIK
GGLGKMGQEVSIPLANGRNLAAKISSLVFYDAEGVRQHVE
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcagacgcatcggctcaaggacggcggccggatagaccgcggcgcggcgctc
ggttttaccttcaacggcaagagttaccaaggctaccagggcgatacgctggcgtcggcg
ctgctggccaacggcgtgcattttgtggcgcgcagctggaaataccatcgcccgcgcggc
atcgtcaccgccggcgtggaagaaccgaatgcgctggtgcagctggaaaccggcgcttat
acggtgccgaacgcccgcgccaccgaaatcgaactgtaccagggcttgaacgcgaccagt
gtcaacgccagtcccagcatcgagaatgaccggatggcggtgaaccagctgttcgcccgt
ttcatcccggccggtttctattacaagacattcaagtggccgcgcagctggtggggcaag
tacgaagaagtgatacgcgaagcagccggcttcggcaaggcgcccaccgcgctcgatcct
gaccgctacgaaaagacctacgcccattgcgatgtgctggttgcaggcgcaggcccggcc
ggccttgctgcggcctgggtcgccgccagttcgggcgcacgggtggtgctggtcgacgac
cagccggagctgggcggcagcctgttgtccgggccggccatgatcgatggcttgcccgct
gcagcgtgggtggcaaagataacggacgatctgcggcgtttgccggaggttacgattttg
tcgcgcagcacggtgttcggctaccaggaacataacctgctgaccgtgacccagcgcctc
agcgagcacctgccgctggcggcgcgcggggcggtgcgcgagcgcttgtggaaggtgcgc
gccaagcacgtgatactggccaccggcgcgcatgagcggcctatcgtattcggcaacaat
gacctgccgggcattatgctggcgtcggcggtgtcgacctatatccaccgctacggcgtg
ctgccggggcgcaaggcggtgatcttcaccaataatgacgatgcttaccagaccgcgctg
gacctgaaggccaacggcgccgaagtgaccgtggttgacccgcgtccggctggcaacagc
agcttgccggctacggcaaggcggcaaggcatcaacatcgtcaacgacgccgtggtggtg
accgccagcggcagccgccatgtcaagatggtggaagtggcgcgtcaccaggatggcgtg
ccggggcagttcattacctcgctggcctgcgacctgctgggcgtgtcgggcggctggaat
ccggtgatccacctgtttgcgcaatccggcggcaaggcgcactggagcaacgaaaaagcc
tgttttgtacctggttcggcgatgcaaaaggaaaccagcgcaggcgccgccaacggcgat
ttcagcctgagcggcgctttgcgcgacggcgccttggcggcgcagcaagcgatcgtcgcg
gtaggcttgaagccgatagtgctgcccagctggaaagtggtggagttgtccgaagccgcc
atcatgcctttgtggctggtgggcgaccgcaagcaggtagggcgcggccccaagcagttc
gtcgattaccagaacgatgtttcggcggcggatatctacctggcggcacgcgagggttat
cactcggtggagcacgtcaagcgctacaccgcgctcggcttcggcaccgaccagggcaag
ctcggcaatatcaacggcatggcgatcctggccgaagtgctgggcaagaccatcccgcaa
accggcaccaccaccttccgcccgaactacacgccggtgactttcggcaccgtggccggg
cgcgagctgggcgagttcctgacgccgatccgcaagacctgcatccatccctggcaccag
gaacagggcgccttgtttgaagatgtcggcaactggaagcggccatggtactacccgcgc
ggcaaggaagacctgcacgccgcggtagcgcgcgaatgcctggcggcgcgcaacagcgtc
ggcatcctggatgcttcgaccctgggcaagatcgatgtgcagggaccggatgccgtcact
ctgctgaactggatgtataccaatccctggaacaagctggaagtcggcaagtgccgctac
ggcctgatgctcgatgaaaatggcatggtgttcgacgacggcgtcacggtgcgcctgggc
gagcagcatttcctgatgagcaccaccaccggcggcgcggcgcgcgtgctggactggatg
gagcgctggctgcagaccgaatggccgcacctgaaggtcaacctgacgtcggtgaccgac
cattttgcgacgtttgcggtggtggggccgaatgcccggcgcgtgttgcagaaggtgtgc
aaggacatcgatttttcgaatgagaaattcccgttcatgtcgttccgcgaaggcagcatc
aacagcgtgttcacccgcatcatgcgcatcagtttttcgggtgaactgtcgtacgaggtg
aacgtgccggccaacatgggacgcgccatctgggacgcgatcatcgaagccggcaaggaa
ttcgacatcacgccttacggcaccgagaccatgcacgtgctgcgtgcagaaaagggctac
atcattgttggccaggataccgacggttcggtgacgccgttcgacctcggcatgggcggc
ctggtcgccaagtccaaggatttcctcggcaagcgttcgctgatccggtccgacactgcg
cgcagcgaccgcaagcagctggtcggcttgctgagcgaggacaaggatgtggtgctgccg
gaaggcagccagatcctggctgaaccaagcaatgaaccgatcgccgacatgatcggccat
gtgacgtccagttattttagtccgatcctgcagcgttcgattgctttcgcgctgatcaag
ggcggcctcggcaagatgggacaggaagtcagcattccgctggcgaacggccgcaatctc
gcggccaagatcagcagcctggtgttttacgatgcagaaggagtccgtcaacatgttgaa
tga
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