Cricetulus griseus (Chinese hamster): 100762221
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Entry
100762221 CDS
T02813
Symbol
Cacna1h
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X2
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge04010
MAPK signaling pathway
cge04020
Calcium signaling pathway
cge04713
Circadian entrainment
cge04925
Aldosterone synthesis and secretion
cge04927
Cortisol synthesis and secretion
cge04929
GnRH secretion
cge04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100762221 (Cacna1h)
04020 Calcium signaling pathway
100762221 (Cacna1h)
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100762221 (Cacna1h)
04925 Aldosterone synthesis and secretion
100762221 (Cacna1h)
04927 Cortisol synthesis and secretion
100762221 (Cacna1h)
09159 Environmental adaptation
04713 Circadian entrainment
100762221 (Cacna1h)
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
100762221 (Cacna1h)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cge04040
]
100762221 (Cacna1h)
Ion channels [BR:
cge04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100762221 (Cacna1h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
100762221
NCBI-ProteinID:
XP_035303559
UniProt:
A0A9J7H4A8
LinkDB
All DBs
Position
7:complement(44962006..45019426)
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AA seq
2361 aa
AA seq
DB search
MTEGTLAADEVRVPLGASPPAPAAPVRASPASPGAPGREEQRGSGSGVLTPESPATECGA
DLGADEEQPVPYPALAATVFFCLGQTTRPRSWCLRLVCNPWFEHVSMLVIMLNCVTLGMF
RPCEDVECRSERCSILEAFDDFIFAFFAVEMVIKMVALGLFGQKCYLGDTWNRLDFFIVM
AGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFV
FFIFGIVGVQLWAGLLRNRCFLDSTFVRNNNLTFLRPYYQTEEGEENPFICSSRRDNGMQ
KCSHIPSRRELRVQCTLGWEAYGQPQAEDGGAGRNACINWNQYYNVCRSGEFNPHNGAIN
FDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIAT
QFSETKQRENQLMREQRARYLSNDSTLASFSEPGSCYEELLKYVGHIFRKVKRRSLRLYA
RWQSRWRKKVDPSSTLHGQGPGRRPRRPGRRTASVHHLVYHHHHHHHHHYHFSHSGPRRP
SPEPGAGDTRLVRACVPPSPPSPGHGPPDSESVHSIYHADCHVEGPQERARVAHSIATAA
SLKLASGLGTMNYPTILPSRTINSKGGTSPRPKGLRGAGTPGAAAHSPLSLGSPSPYEKI
QHVVGEQGLGRASSHLSGLSVPCPLPSPQAGTLTCELKSCPYCASALEDPEFEFSGSESG
DSDAHGVYEFTQDVRHGDCRDPVQQPNEVGTPGHGSERRRPPRRTTSEPRGLGHLWASFS
GKLRRIVDSKYFNRGIMAAILVNTLSMGVEYHEQPDELTNALEISNIVFTSMFALEMLLK
LLAYGPLGYIRNPYNIFDGIVVVISVWEIVGQADGGLSVLRTFRLLRVLKLVRFLPALRR
QLVVLMRTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDSGDTVPDRKNFDSLLWA
IVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGD
ATRSDTDEDKTSTHLEEDFDKLRDLQATEMKMYSLAVTPNGHLEGRGSLPPPVITHTAAT
PMPTPKSSPHLDVAHVLLDSQHSGSGSVDPQTGDQKSLASLRSSPCAPWGPNSAGSSRRS
SWNSLGRAPSLKRRSQCGERESLLSGEGKGSTDDEAEDSKPGTRPHPGASPGPRATPLRR
AESLDHHSTLDLCPPRPASLLPTKFHDCNGQMVALPSEFFLRIDSHKEDATEFDDDIEDS
CCFRLHKVLEPYAPQWCRSRESWALYLFPPQNRLRVSCQKVIAHKMFDHVVLVFIFLNCI
TIALERPDIDPGSTERAFLSVSNYIFTAIFVVEMMVKVVALGLLWGEHAYLQSSWNVLDG
LLVLVSLVDIIVAMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRP
IGNIVLICCAFFIIFGILGVQLFKGKFYYCEGTDTRNITTKAECHAAHYRWVRRKYNFDN
LGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPVQNHNPWMLLYFISFLLIVSFFVLNM
FVGVVVENFHKCRQHQEAEEARRREEKRLRRLERRRRKAQRRPYYADYSHTRRSIHSLCT
SHYLDLFITFIICLNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAALKLVAFGFRR
FFKDRWNQLDLAIVLLSIMGIALEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGM
RALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGRLECSEDNPCEGLSRHATFTNFG
MAFLTLFRVSTGDNWNGIMKDTLRECAREDKHCLSYLPALSPVYFVTFVLVAQFVLVNVV
VAVLMKHLEESNKEAREDAEMDAEIELEMAQGSTAQPPSATPESPGTQPDTPNLLVVRKV
SVSRMLSLPNDSYMFRPVAPAIVPHPHPLQEVEMETYAGLVTSAHSPPLEPRASFQVPSA
ASSPARVSDPLHALSPRGTPRSLSLSRILCRQEAMHTESLEGQVDDPGEDGIPDHAEPAE
NTSTKQLSLGSLRSPTCSPRPASVRTRKHTFGQRCISSRPPTLGGDEAEAADPADEEVSH
ITSSAHPWPATEPHSPEASPAASPVAKGVVGSGRDPHRFCSVDAQSFLDKPGRADSQRWP
SVELDSGDSHLEAGEGRGRASELEPALGARRKKKMSPPCISIEPPTEDEGSSRPPAAEGG
NTTLRRRTPSCEAALHRDCPESTEGPGNGGDAVAKGERWGQASCRAEHLTVPNFAFEPLD
MGGPGGDSFLDSDQSVTPEPRVSSLGAIVHLVHHGTEPPVPSGDPPEKGQGLYLTVPQTP
LKKPGSPPATPALDDSGDEPV
NT seq
7086 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagggcacgctggccgcggacgaagtccgggtgcccctcggcgcttctcctccg
gctcctgcagcgccggtgagggcttccccagcgagccctggggcgccggggcgcgaggag
cagcgaggatccgggtccggcgtgttgactcccgagagcccggcgaccgagtgtggtgcg
gacctgggtgccgacgaagaacagcccgtcccatacccggcactggcggccacggtcttc
ttctgccttgggcaaaccacgcggccgcgcagctggtgcctccgactggtttgtaacccg
tggttcgagcacgtcagcatgctggtcatcatgctgaactgcgtgacgctcggtatgttc
cggccctgcgaggatgttgagtgccgctcagagcgttgcagcatcttggaggcctttgat
gatttcatctttgcctttttcgctgtggagatggttatcaaaatggtggctttggggctg
tttgggcagaagtgctacctgggtgacacctggaacagactggacttcttcattgtcatg
gcgggcatgatggagtactctctggatggacacaatgtgagcctctctgccatccgcaca
gtgcgtgtgctgcggcccctccgcgccatcaatcgggtccccagcatgcggatcctggtc
actctgctgctggatacactgcccatgctcgggaatgttcttctgctctgcttcttcgtc
ttcttcatcttcggcattgtcggggtccagctctgggcaggcctgctgcggaaccgctgc
ttcctggacagcaccttcgtcaggaacaacaacctgaccttcctgcgtccatactaccaa
acagaggagggtgaggagaaccctttcatctgctcctcacgccgcgacaatggcatgcag
aagtgctcacacatccccagccgtcgtgagcttcgtgtgcagtgcacacttggctgggag
gcctatgggcagccacaggctgaggatgggggtgctggccgcaatgcctgtatcaactgg
aaccagtactacaatgtgtgccgctcaggggaattcaaccctcacaatggtgccatcaac
tttgacaacatcggctatgcttggatcgccatctttcaggtcatcacattggagggctgg
gtggacatcatgtactacgtcatggatgctcattcgttctacaacttcatctacttcatc
ctcctcatcatcgtgggctccttcttcatgatcaacctgtgcctggtggtgatagccaca
cagttctcagagacaaagcagagggaaaaccagctgatgcgtgaacagcgggctcgctat
ctgtccaacgacagcactctggccagcttctcggagcccggcagctgttacgaagagctc
ctcaagtatgtgggccacatcttccgcaaggttaagcgccgtagcctgcgcctttatgcc
cgctggcagagccgctggcgtaagaaggtggaccccagcagcactctgcatggccaaggc
cctggacggcggccacggcggccaggcagacgcacagcttctgtgcaccacctggtctac
catcaccaccaccaccaccatcaccattaccacttcagccacagtggcccacgcaggccc
agcccagagccaggtgctggtgacaccaggttggtccgggcctgtgtgcccccctcgcca
ccatccccaggccatgggccaccagactctgagtctgtgcacagtatctaccatgctgac
tgccatgtggaggggccacaggaaagagcccgggtggcacactccatagccactgctgcc
agtctcaagctggcctcgggtctgggcaccatgaactaccccaccatcctgccttcaaga
acaatcaacagcaaaggtggcaccagcccacgacccaaggggctacggggtgctggaacc
cctggggctgcagcacacagccctctgagcctgggcagtcccagcccctatgagaagatc
cagcatgtggttggggaacaaggactaggccgagcctctagccacctgtctggcctgagt
gtgccttgccccctgcccagccctcaggcgggcacactgacctgtgagctgaagagctgc
ccatattgtgccagtgccctggaggaccccgagtttgagttcagtggctcagagagtgga
gactcagatgcccatggagtctatgagtttacacaggatgtacgacatggggattgccgg
gaccctgtgcagcagcccaatgaagtgggcacaccaggtcatggcagtgagaggcggcgg
ccacctcggcggacaacctcagagccaagagggctaggccacctctgggcttccttcagt
ggcaagctgcgtcgaattgtggatagcaagtacttcaaccggggcattatggcagccatc
ctcgtcaacacgctgagcatgggcgttgagtatcatgagcagcccgacgagctgaccaat
gcgctggagatcagtaacatcgtattcaccagcatgtttgccctggagatgctactcaag
ttgctggcctatggcccgctgggctacatccggaacccctacaacatctttgacggcatt
gttgttgtcatcagcgtctgggagattgtggggcaggcagatggcggcttgtctgtgctc
cgcacatttcggctgctacgagtgctgaagctggttcgcttcctgccggcgctgcggcgg
cagctggtggtgctcatgaggaccatggacaatgtggccaccttctgcatgttactcatg
ctcttcatcttcattttcagcatcctgggaatgcacctgtttggctgtaagttcagcctg
aagacagactctggagacacagtccctgacaggaagaactttgactccctgctgtgggcc
atcgtcactgtgttccagatcctgacacaggaagactggaacgtggtcctctacaatggc
atggcttccacctcctcctgggctgccctgtactttgtggccctgatgacctttgggaac
tacgtgctcttcaacctgctggtagccatcctggtggaaggcttccaggcagagggtgat
gccaccagatctgacactgacgaagacaagacatctacccacttagaggaagattttgat
aagctcagagatcttcaggccacagagatgaagatgtattcactggctgtgacccctaat
gggcacctagagggccggggcagcctgccaccccctgtcatcactcacacagcagctacg
cctatgcctacgcccaagagctccccacacctggatgtggcccatgttctcctggactca
cagcacagcggcagcggctctgtggacccccaaacaggggaccagaagtctctggccagc
ctccgaagctccccgtgtgccccatggggccccaacagtgctgggagcagccggcgctcc
agctggaacagcctgggccgtgcacccagcctcaaacgccgcagccagtgtggggagcgt
gagtccctgctctctggtgagggaaagggcagcacagatgatgaggctgaggacagcaaa
ccaggcacaagaccccacccaggagcctcgcctgggccccgtgccaccccacttcggcgg
gccgagtcattggaccaccacagcactctggacctgtgtcctccacggcctgcttccctc
ctacccaccaagttccatgactgcaatgggcagatggtggccctacccagtgagttcttc
ctgcgcatcgacagccacaaggaggatgcaaccgagtttgacgatgatatagaggatagc
tgctgcttccgtctgcacaaagtgctcgaaccctatgctccccagtggtgccgcagccgg
gagtcctgggccctgtacctcttcccaccacagaacaggctacgagtctcctgccagaaa
gtcatcgcacacaaaatgtttgaccatgtggtccttgtcttcatcttcctcaactgtatc
accattgccctggagaggccagacattgacccaggcagcaccgagagggccttcctcagc
gtctccaactacatcttcacagccatctttgtggtagagatgatggtgaaggtggtagcc
ctgggactgctgtggggtgagcacgcctacctgcagagcagctggaatgtgctggatggg
ctccttgtcctggtgtccctggttgacatcatcgtggccatggcctcagctggcggtgcc
aagatcctgggtgtcctgcgtgtgctgcgcctgcttcggaccctgcggcctctgagggtc
atcagccgagctccgggcctcaagctggttgtagagactctgatatcatcgctcaggccc
attggaaacatcgtcctcatctgctgcgccttcttcattatctttggcatcctcggggtg
cagcttttcaagggcaaattctactactgcgagggcacagatactaggaatatcaccacc
aaggccgagtgccacgctgcccactaccgctgggtgaggcgcaagtacaactttgacaac
ctgggccaggcgctgatgtccctgtttgtgctgtcgtccaaggatggctgggtgaacatc
atgtatgatgggcttgatgccgtgggcattgaccagcagcctgtgcagaaccataacccc
tggatgttgctgtacttcatctccttcctgctcatcgtcagcttcttcgtgcttaacatg
tttgtgggtgtggtggtggagaacttccacaaatgccggcagcaccaggaggctgaggag
gcacggcggcgtgaggagaaacggctgcggcgcctggagaggaggcgcaggaaggcccag
cgccggccatactacgcagactattcacacacgcgccgctccatccattcgctgtgcacc
agccactacctggacctcttcatcaccttcatcatctgcctcaatgtcatcaccatgtcc
atggagcactacaaccagcccaagtctctggatgaggccctcaagtactgcaactacgtc
tttaccattgtcttcgtctttgaggctgcactgaagctggtggcctttgggttccggagg
ttcttcaaggacaggtggaaccagctggacttggccatagtcctcctgtccatcatgggc
attgcgctggaggaaattgagatgaatgctgccctgcccatcaaccccaccatcatccgc
atcatgcgcgtgcttcgcatcgcccgcgtgctgaagctactgaagatggccacaggcatg
cgtgccctgctggatactgtggttcaagctctgcctcaggtagggaaccttggtcttctt
ttcatgctcctgttttttatctatgctgccctgggagtggagctgtttgggaggctagag
tgcagtgaggacaatccctgtgagggcctgagcaggcacgctaccttcaccaactttggc
atggccttcctcacactgttccgagtatccacaggagacaactggaatgggatcatgaag
gacaccctacgtgaatgtgcccgtgaagacaagcactgcctcagctacctgcctgcactc
tctcccgtctacttcgtcaccttcgtgctggttgcccagtttgtgttggtcaacgtggtg
gtggccgtgctcatgaaacacctggaggagagcaacaaggaggcccgcgaggacgccgag
atggatgctgagattgagctggagatggctcagggctccacagcccagcccccatctgcc
acaccggaaagcccggggacccagccagacactccaaacctcctggtcgtgcgcaaagtt
tctgtgtccaggatgctctcgctgcccaacgacagctacatgttccggcctgtggctccc
gccattgtcccacaccctcacccactgcaggaagtggagatggagacctacgctggcctg
gtcacctctgctcactcgccgcccctggagccccgtgcctccttccaggtcccgtcggct
gcatcctccccagccagggtcagcgacccccttcatgccctgtcaccccggggcacaccc
cgttctctgagcctctcacggatactctgcagacaggaggccatgcacaccgagtccctg
gaagggcaggttgatgaccctggagaagacggcatcccagaccacgcagagcctgctgaa
aatacctccacgaagcaattgtctctgggctccctgcggtcccctacctgctccccacga
cctgccagtgtccgtacgcgcaagcacactttcgggcagcgctgcatctctagccgccct
cccaccctgggaggagatgaggctgaagcagccgacccagccgatgaggaggtcagccac
atcaccagctcagctcacccctggccggctacagagccccacagcccagaggcctcccca
gcagcctcccctgttgccaaaggtgtggtgggcagtgggcgagacccacacaggttctgc
agtgtagatgctcagagcttcctggacaaaccaggtcgagcagattcacaacggtggccc
tctgtggaactggatagtggagacagccacctagaggccggggaggggaggggtcgggcc
tcagagctggagccagctcttggagcacgaaggaagaaaaagatgagccctccctgcatc
tccattgaacctcccactgaggatgagggctcctcccggccccctgcagccgaaggtggc
aacactaccctgaggcgcagaaccccgtcctgtgaggctgccctacacagggactgccca
gagtccacagagggcccaggcaatggaggggatgctgtagccaagggtgagcgctggggc
caggcctcctgccgggcagagcacctgactgtccccaactttgcctttgagcctctggac
atggggggacctggtggagactcttttttggacagtgaccaaagtgtgaccccagaaccc
agagtttcctctttgggggctatagtgcatcttgtgcaccatggaactgaacctcctgtg
ccctctggtgaccccccagagaaggggcaaggactgtacctcactgtgccccagaccccc
ttgaagaaaccagggtctcccccagccacccctgccctagatgacagtggagatgagcct
gtgtag
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