Cricetulus griseus (Chinese hamster): 100770880
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Entry
100770880 CDS
T02813
Symbol
Grin1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge04014
Ras signaling pathway
cge04015
Rap1 signaling pathway
cge04020
Calcium signaling pathway
cge04024
cAMP signaling pathway
cge04080
Neuroactive ligand-receptor interaction
cge04713
Circadian entrainment
cge04720
Long-term potentiation
cge04724
Glutamatergic synapse
cge05010
Alzheimer disease
cge05014
Amyotrophic lateral sclerosis
cge05016
Huntington disease
cge05017
Spinocerebellar ataxia
cge05020
Prion disease
cge05022
Pathways of neurodegeneration - multiple diseases
cge05030
Cocaine addiction
cge05031
Amphetamine addiction
cge05033
Nicotine addiction
cge05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
100770880 (Grin1)
04015 Rap1 signaling pathway
100770880 (Grin1)
04020 Calcium signaling pathway
100770880 (Grin1)
04024 cAMP signaling pathway
100770880 (Grin1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100770880 (Grin1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100770880 (Grin1)
04720 Long-term potentiation
100770880 (Grin1)
09159 Environmental adaptation
04713 Circadian entrainment
100770880 (Grin1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100770880 (Grin1)
05014 Amyotrophic lateral sclerosis
100770880 (Grin1)
05016 Huntington disease
100770880 (Grin1)
05017 Spinocerebellar ataxia
100770880 (Grin1)
05020 Prion disease
100770880 (Grin1)
05022 Pathways of neurodegeneration - multiple diseases
100770880 (Grin1)
09165 Substance dependence
05030 Cocaine addiction
100770880 (Grin1)
05031 Amphetamine addiction
100770880 (Grin1)
05033 Nicotine addiction
100770880 (Grin1)
05034 Alcoholism
100770880 (Grin1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cge04040
]
100770880 (Grin1)
Ion channels [BR:
cge04040
]
Ligand-gated channels
Glutamate (ionotropic)
100770880 (Grin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF6724
Motif
Other DBs
NCBI-GeneID:
100770880
NCBI-ProteinID:
XP_027278656
UniProt:
A0A8C2LT79
LinkDB
All DBs
Position
6:complement(136645090..136669380)
Genome browser
AA seq
959 aa
AA seq
DB search
MSTMHLLTFALLFSCSFARAACDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYNWNHIILLVSDDHEGRAAQKRL
ETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTALLMEARELEARVI
ILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESA
HISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLK
IVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYGFC
IDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKAT
FRAITSTLASSFKRRRSSKDTSTGGGRGALQNQKDTVLPRRAIEREEGQLQLCSRHRES
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcacctgctgacattcgccctgcttttttcctgctccttcgcccgtgcc
gcctgcgaccccaagatcgtcaacatcggcgccgtgctgagcacgcgcaagcacgagcag
atgttccgcgaggccgtgaaccaggccaataagcgacacggctcttggaagatacagctc
aatgccacctctgtcacccacaagcccaacgccatacagatggccctgtcagtgtgtgag
gacctcatctccagccaggtctacgctatcctagttagtcacccgcctacccccaacgac
cacttcactcccacccccgtctcctacacagctggcttctacaggatccccgttctggga
ctgactacccgaatgtccatctactctgacaagagcatccacctgagcttcctacgcacc
gtgccgccctactctcaccagtccagcgtctggtttgagatgatgcgcgtctacaactgg
aaccatatcatcctgctggtcagcgacgaccacgagggccgggcggcgcagaagcgcctg
gagacgttgctggaggagcgtgagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactgtcctatgacaacaagcgcggacccaaggcggagaaggtgctgcagtttgacccg
ggaaccaagaacgtgacggctctgctgatggaggctcgggaattggaggccagggtcatc
attctttctgctagcgaggacgacgctgccaccgtgtaccgcgcagccgcgatgctgaac
atgacgggttctgggtacgtgtggctggtgggggagcgcgagatctcggggaacgccctg
cgttacgccccagacggcatcatcggactgcagctcatcaacggcaagaacgagtcggcc
cacatcagcgacgccgtgggcgtggtagcacaggctgttcacgagctgctagagaaagag
aacatcaccgaccctccgcggggttgcgtgggcaacaccaacatctggaagacaggacca
ctgttcaaaagggtactgatgtcttccaagtatgcggatggagtgactggccgtgtggag
ttcaatgaggatggggaccgcaagtttgccaactatagtatcatgaacctgcagaaccga
aagctggtgcaagttggcatctacaatggcacccatgtcatcccaaatgacaggaagatc
atctggccagggggagagacagagaagcctcgaggataccagatgtccacgagattaaag
atagtgacaatccaccaagagccctttgtgtatgtcaagcccacactgagtgatgggacg
tgcaaagaggaattcacagtcaatggtgacccagtcaagaaagtgatctgcacagggcct
aatgacacatcaccaggcagcccacgccacacagtgcctcagtgctgctatggcttctgc
attgacctgctcatcaagttggcacggaccatgaactttacctatgaggtgcacctggtg
gcagatggcaagtttggcacacaggaacgggtgaacaacagcaacaaaaaggagtggaat
gggatgatgggagagctgctcagtggtcaagcagacatgattgtggcaccactgaccatc
aacaatgagcgtgcacagtacatagagttctccaagcccttcaagtaccagggcctgacc
attctggtcaagaaggagatcccccggagcacactggattcatttatgcagcccttccag
agcacactatggttgctagtggggctgtcagtgcacgtggtggctgtgatgttgtatctg
ctggaccgcttcagtccatttggccggttcaaagtgaacagcgaggaagaggaggaggat
gccctgaccctgtcctctgccatgtggttctcctggggtgtcctactcaactctggcatt
ggggaaggtgccccccggagtttctctgcacggatcctaggcatggtgtgggctggtttt
gccatgatcattgtggcttcctatactgccaacctggcagccttcctggtgctggatcgg
cctgaggagcgtattacaggcatcaatgacccgaggctcagaaacccctcagacaagttt
atctacgccactgtgaagcagagttctgtggacatctacttccggaggcaggtggagttg
agcaccatgtaccggcacatggaaaaacacaactatgagagcgcagctgaggccatccaa
gctgtgcgggacaacaagctccatgccttcatctgggattcggcagtgctagagttcgag
gcttcacagaaatgtgacctggtgaccacgggcgagctgttcttccgctcaggctttggc
atcggcatgcgcaaggacagcccctggaagcagaatgtttccctgtccatactcaagtcc
catgagaacggcttcatggaagatctggataagacatgggttcggtatcaggaatgtgac
tcccgcagcaatgctcctgctactctcacttttgagaacatggcaggggtcttcatgctg
gtggctggaggcatcgtggccggcatcttcctgattttcatcgagattgcctacaagcga
cacaaggatgcccgtaggaagcagatgcagctggcttttgcggcagtgaacgtgtggagg
aagaacctgcaggatagaaagagtggtagagcagagcccgaccctaaaaagaaagccaca
tttagggctatcacctccaccctggcctccagcttcaagagacgtaggtcctccaaagac
acgagcaccgggggtggacgcggcgctttgcaaaaccaaaaagacacagtgctgccgcga
cgcgctattgagagggaggagggccagctgcagctgtgttcccgtcatagggagagctga
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