Cricetulus griseus (Chinese hamster): 100770970
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Entry
100770970 CDS
T02813
Symbol
Tarbp1
Name
(RefSeq) probable methyltransferase TARBP1 isoform X2
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
cge
Cricetulus griseus (Chinese hamster)
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cge03016
]
100770970 (Tarbp1)
03036 Chromosome and associated proteins [BR:
cge03036
]
100770970 (Tarbp1)
Enzymes [BR:
cge01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
100770970 (Tarbp1)
Transfer RNA biogenesis [BR:
cge03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
100770970 (Tarbp1)
Chromosome and associated proteins [BR:
cge03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100770970 (Tarbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
IF5A-like_N
Motif
Other DBs
NCBI-GeneID:
100770970
NCBI-ProteinID:
XP_027260594
UniProt:
A0A9J7JJ17
LinkDB
All DBs
Position
3:complement(203234488..203284870)
Genome browser
AA seq
1577 aa
AA seq
DB search
MERVLADALLAQSREPCALLGTLCGGEATAERAETLRLVLQRLEERGVGAGALAEAAHEV
AKGHLVPLLKASPGGGPAGPRVLRAASAALRSCARLAGPELAVALAEDALRELPRVPAVE
LLAAVAPCLRALEDAPLLRRLARASVELALAGDAPPAVGARLLPALSLSAEPALREAWDT
LASSGPEAEGRTGPELLVLSALAEKLLSADARHADLDARLRGSFWRTVQAGLGRAQDALT
RKRARYLLQRAVQLSAELAMDCYCGPQDTLGPSLFWWSEKKKDELLKFWENYILIMEVLE
GNQIHVIKPVLPKLNSLFEYAVSEENGCWLFHPSWHMCIYKRMFESENKILTKEGVIHFL
ELYEVKSLPYSPELSEFITGPLMDALSESCLYSRSPGQLLGSGSPLGLKLQKFLVTYVSL
LPEETKSHFLLKFIQRMADRHWCAVPILFLSKALASLPRCKALGGEGLLALRDVLQCTMI
THQVLLRGAAQCYLLQTAMHLVDVEKVSLSDISAFLVSLRQEESLGRGTMLWTELCDWLR
VNERYFRQSLIGGSDGQETSLNAYVKKLVQEFVKSPGWERESCFMPDWLEARLTSLMVLL
AVDVEGMKTQFREKQRTQNVLRIFLDPLLDALGKLATNAYMPLLRTDRCLQLLARLLHSC
VPRGSSGQDDEVSSVLQTSIMSVADSVSQFVLRRLTMNELQSVADLDRCQLYLKVLAELT
SLQVKQGWKAGNPISRVISPLKNACIHHLQEAEDGEEPTLGHQVQRAVSMATLAALCEAV
DQHPVLQLDAEPMDRFLSTLPLNQMLQKPRSEEQNGCVHPLENGSVFEESSSSQGWGKIA
AQYLHDQWVCLSFLLRKHYPLIPTTESDRLECFLPAVEMPVQTLRSALDVLTVLPAGCIL
PVFRCMEVLVPKLLTSDESLCIESFDMAWKIISSLSNTQLTFWPNLKAFIHFVFNNEILT
IAAKLKGQGYFKIKEIMCKIIEMSSIKTGVFNILICHCCQSWIAAACGVSHSSLFSSAKD
YSELVLEACVFGTVFRRDQRLIQDVQTFIENLGQDCAANIIIENTKREDYYVRICAVKFL
CLLDGSNISHKLFIEDLAIQLLDKDESTSRSRTRYHENSLQHRVKNRAWQTLLVLFPRFD
QNFLNGIIDKIFHAGFTNNQASIKYFIEWIIILILHKFPQFLPKFWDCFSYGEEKLKTSI
CTFLSVLSHLDIIIQNIPEKRLVLKQALTIALQWCLSHNFSVRLYALVALKKAWQLCKAL
KFEECDAWTTVIECSLSQAESMHGAGNARKNWQRIQDHFFFSTFHPLKDYCLETIFYTLP
RLSGITEEEWITLDKFASFTDIPSNTGSHWYLSGTALGELSPGDWSQQDRGYTLGEAESQ
SEWADVQKKIIPWGHKALESDLELMFQDRAAKLGKSISRLIVVASLIDKPTNLGGLCRTC
EVFGAAVLVVGSLQCVSDRQFQHLSVSAEQWLPLVEVRPAQLTDYLQQKKAEGYTVIGVE
QTAQSSDLAQYRFPEKSLLLLGNEREGIPANLIQQLDVCVEIPQQGIIRSLNVHVSGALL
IWEYTRQQLLGCAGLAS
NT seq
4734 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggtgttggcggacgcgcttctggcgcagagccgggagccctgcgcactgctg
gggacactgtgcggcggagaggcgactgcggagcgggcggagactctgcgtctggtgctg
cagcggctggaggagcgcggcgtgggcgccggcgcgctagccgaggctgcgcacgaggtg
gccaagggccacctggtgcctttactgaaagcgtctccaggcggagggcctgcggggccg
cgcgtgctccgagcggcgagcgcagcgctgcgctcatgtgcgcgcctggcggggcccgaa
ctggcggttgctctggctgaggacgcgctgcgcgagctgccgagagttccggccgtggag
cttctggccgccgtggcgccgtgtctgcgcgccctcgaggatgcccccctgctgcgtcga
ctggcgcgcgcgtccgtagagctggcgctggccggggacgcgccgcccgcggtgggtgcg
cgcctgctacctgccctgtccttgagtgcagaaccggcgctgcgggaggcttgggacacg
ttggcctcctcgggacccgaagctgaaggccgcactgggccagagctgctggtgctgagc
gcgctggccgagaagctgctgtcagctgatgcgcgccatgcggacctggatgcgcgcctc
cgcggcagcttctggagaaccgtacaggcggggctgggccgcgcgcaggacgcgctcacg
cgcaagcgcgcgcgctacctgctgcagagggcagtgcagctgtctgcagagctggctatg
gactgttactgcggtccccaggacacattgggtccaagcctgttctggtggtctgagaag
aaaaaagacgagcttctaaagttttgggaaaactatatcttgatcatggaagttctagaa
ggaaatcagatacatgtcataaagccagtcttaccaaagctaaacagtctgtttgaatac
gcagtatcagaggaaaatggctgctggctcttccacccctcctggcacatgtgcatttat
aaaagaatgtttgaaagcgagaataaaatcctgaccaaagaaggcgtgatccacttcttg
gagctgtatgaagtgaaatcgcttccatactcaccggaactctccgagtttattactggc
ccactgatggatgccctctcagagagctgtctgtacagcaggtccccagggcaattgttg
ggaagtggctctcccctgggattaaagctgcagaagtttctagtcacttatgtttctctt
cttccagaagaaacaaagagtcatttcctgttaaagttcattcagaggatggcagataga
cactggtgtgccgtgccgattttgttcctttccaaggctttggcaagcttgcccagatgt
aaggccctgggtggagaagggcttcttgccctcagggatgttctccagtgcaccatgatc
acacaccaggtcctcctgagaggagcagcacagtgctatcttcttcagacagccatgcat
ctggtggatgtggagaaagtgtctctttctgacatctcagcttttcttgtgtctctgaga
caagaggagtccttgggacgagggaccatgttgtggacagagctctgtgactggctacgt
gtcaacgaaagatacttcaggcagtccttgattggtggctctgatggacaggagacgtcg
ttaaatgcttatgtgaagaagctagttcaggagtttgtgaagtctcctggttgggaaaga
gaaagctgctttatgccagactggcttgaagccaggctgacttctctgatggttcttctg
gctgtggacgtggaaggaatgaagacccagttcagagaaaagcagaggactcagaacgtg
ttgaggatcttcttagaccccctgctggatgcactggggaagctcgccacgaatgcctac
atgcccttgctgaggactgaccggtgcctccagctgctggcgaggttgctgcattcttgt
gtgccaagaggttccagtggccaagatgatgaggtgtcctctgtcctccagacctccatc
atgtctgttgcagacagcgtgtctcagtttgtgctcaggagacttaccatgaatgagctg
cagagcgtggcagatctggaccgctgccagctatatctgaaggtgttggctgaactcacg
agtctccaggtgaagcagggctggaaagcaggcaaccctatcagccgagtcatttctcct
ttgaaaaatgcatgcattcaccatctgcaggaggctgaggatggagaggagccaaccctg
ggtcatcaggtgcagagagcagtcagcatggccaccctggcagctctgtgtgaagctgtg
gaccagcacccagtgctgcagctggatgctgagcccatggacaggttcctgtcaactctt
ccactcaatcagatgctgcagaagccccgttcagaggaacagaacggctgtgtgcatccc
ttggagaatggcagtgtttttgaagaatcatcatcttctcaaggatgggggaaaatagcg
gcacagtacctacacgatcagtgggtctgcctctccttcctgctgagaaagcactacccc
cttattccaaccacggaaagtgacaggctggagtgctttctccctgctgtcgagatgcct
gtgcagaccctgcggtctgctctggacgtcctcacggtcctccctgcaggctgcatctta
cctgtgttccgctgtatggaggtgctggttcccaagctcctgacttcagacgagtcactc
tgcatagaatcttttgacatggcttggaaaatcatatcttccttgagcaacactcagctg
acattctggcctaatttaaaagccttcattcactttgtttttaataatgaaattcttacc
attgctgcaaaactcaagggtcagggatacttcaaaataaaagagattatgtgcaagata
attgaaatgtcctccataaaaacaggggtcttcaatattctgatctgtcactgctgccag
tcttggatagcagctgcttgtggtgtgtcccacagcagcttgttctccagtgctaaggat
tacagtgaacttgtcctggaggcttgtgtgtttggaacagtgtttaggcgtgatcagaga
cttattcaggatgtccaaaccttcatagaaaaccttggacaagactgtgcggcaaacatc
atcatagagaacactaagagagaagattattacgtgagaatctgtgctgtcaaattcttg
tgtctgctagatggctccaacatatcccacaagttgtttatagaagatcttgccatccag
ctcctggataaggatgagtcaacatccagatccagaactcgctaccatgagaactccctg
cagcaccgggtgaagaaccgggcatggcagactctgcttgtcctattccccagatttgat
cagaacttcttgaatgggattattgataagattttccatgctggcttcaccaacaatcaa
gcatccataaaatattttattgagtggattattatattgattcttcataaattcccccag
tttcttccaaagttctgggactgtttttcttacggtgaagaaaaacttaaaacaagcatt
tgtacatttttatctgttttatcacatttggacatcatcattcagaatattccagaaaag
aggctggttctgaagcaggccctcaccatcgctctgcagtggtgtctgagccacaacttc
agcgttcgactctacgctctggtagcactcaagaaggcctggcagctatgtaaagcactg
aagtttgaagagtgtgacgcctggaccacagtcatcgagtgcagtctcagccaggcagaa
agcatgcatggagcagggaatgccaggaagaactggcagcgcatccaggaccatttcttc
ttctccacgttccaccccctgaaggactactgtctggagaccatattttacacccttcca
cggctctcgggtattactgaagaggagtggatcacattggataaatttgccagcttcaca
gacatcccttccaatacagggtcccattggtacctgtctgggactgcacttggtgagctg
agtccaggagactggtcccagcaagaccgaggttataccttgggtgaagcagagagccag
tcagagtgggctgatgtccagaaaaagattatcccatggggacacaaggctctggagtca
gacctggagcttatgtttcaggaccgggccgccaagcttggaaagtccattagtagactg
attgtcgtggcctcactcatcgacaagccaaccaacttaggagggctgtgccggacctgt
gaggtgttcggagctgcagtacttgtcgtcggcagtcttcagtgtgtcagtgacagacag
ttccagcacctcagtgtctccgcagagcagtggcttcctctggtagaggtgagaccagcc
cagctaacagattatctgcagcagaaaaaggcggaaggctacactgtcatcggtgtggag
cagacagctcaaagctcagacctagcccagtaccgcttccctgagaagtcactgcttcta
ttgggaaatgagcgggaaggaatcccagccaacctgatccagcagctggatgtgtgtgtg
gagattcctcagcagggcatcatccgctcactgaatgtgcacgtgagcggggccctgctg
atctgggagtataccagacagcagctgctcgggtgtgcggggctggcatcctga
DBGET
integrated database retrieval system
