Cricetulus griseus (Chinese hamster): 100774617
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Entry
100774617 CDS
T02813
Symbol
Brip1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03440
Homologous recombination
cge03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100774617 (Brip1)
03460 Fanconi anemia pathway
100774617 (Brip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cge03400
]
100774617 (Brip1)
Enzymes [BR:
cge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100774617 (Brip1)
DNA repair and recombination proteins [BR:
cge03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
100774617 (Brip1)
FA (Fanconi anemia) pathway
Downstream FA components
100774617 (Brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
DUF1866
Motif
Other DBs
NCBI-GeneID:
100774617
NCBI-ProteinID:
XP_027282174
UniProt:
G3I6L7
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All DBs
Position
7:complement(99323570..99452184)
Genome browser
AA seq
1166 aa
AA seq
DB search
MSSVSSEYTIGGVKINFPCKAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSA
LAWQQSSTGKPVDEGLNKKLEVPSSCCCACHSKSFMYSNTDMGTSPHFSSPSKLSERNGS
SPPCQDSPEKNTLAAKLSAKKQASKHRDEDDDFQMEKKRIRPLETAQQMRKRHCLEKDVH
HLDARVASEKKVKPESPVGKTSSSFQNLDGLCSRCCCSTKQGNSEESANTVKKDHGGQSK
RPKIYFGTRTHKQIAQITRELQKTAYSGVPMTILSSRDHTCVHPEVMGNFNRNEKCMELL
DVKQGKSCYFYHGVHRINNQHTLQSFPGMSKAWDIEELVSLGRKLKACPYYTARELIDEA
DIIFCPYNYLLDAQIRESMDIKLKDQVVILDEAHNIEECARESASYSVTEVQLRFARDEL
DSLINSNVRKKNHEPLRDVCYNLINWLETNSEHLVERDYESSCKIWSGNEMLLSLYRMGI
TNATFPVLQRHFSAVLQKEEKAYGKEEAIQIPIISASTQIMLKGLFMVLDYLFRENSRFA
DDYKIAIQQTYSWTNQIAIFDKSGVLAVPKNKKHSRQKIGVNVLNFWCLNPAVAFSDIND
KVRTIVLTSGTLSPLKSFSSELGVTFNIQLEANHVVSNSQVWVGTVGSGPQGRNLCATFQ
HTETFEFQDEVGMLLLSVCQTVSQGILCFLPSYKLLEKLRERWVSTGLWHSLESVKTVIA
EPQRGEKTDFDELLQVYYDAIKFKGEKDGALLIAVCRGKVSEGLDFSDDNARAVVTVGIP
FPNVKDLQVELKRQYNDHHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILV
DDRFNSNPNRYISGLSKWVRQQIQHHSTFASALESLTEFSRRHQKVTNRSKKDKESTLNV
ACLEDSTLTGVSKASHLSPENSREEEAKLCVQELQCPQMTAKNPSVPSHDIPRRKKSDPV
LREESVQTMKTEKNVISRSSSPTFGKQTEPVSWPVFKSLRQHFTRKVKNQTPVLGSSKSH
ASGSSTFKTEKTEDSTALPHTGKRVSSKETVNAPFAPCPQSESLSSMKVDITPAENHSKQ
LFCSEKDVHPGTESSPVSEDANRSSSSAAIETEAGDDSLSLTPELFDPVDTDEENSEPVE
TDRSSNNSDCFSSEDLFESVTDFSQK
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcagtgtcttctgaatacaccattggtggggtgaagattaactttccttgtaaa
gcttatccagcacagcttgctatgatgaactctattgtcagaggactaaacagtagtcag
cattgtttgttggagagtcccacaggaagtggaaaaagtttagccttactttgttctgca
ttggcatggcaacaatcttctactggaaagccggtggatgagggcttgaataaaaagctt
gaggtgccatcatcatgctgttgtgcatgccattcaaagagctttatgtacagcaacacg
gacatgggtacttcccctcatttcagtagtccaagcaaactgtctgagagaaatggctct
tcaccaccctgtcaagattctcctgaaaaaaatactctggctgcaaagttatctgccaag
aaacaggcatctaaacacagagatgaagatgatgattttcaaatggagaagaaaagaatc
cgacccttagaaactgcacagcagatgagaaaacgtcattgtttggaaaaggatgtccac
catttggatgcacgggtagcttcggaaaagaaagtaaaacctgagtctcctgtaggaaag
acaagctcctctttccaaaatctcgatggcctctgttctaggtgctgctgttctaccaaa
caaggaaacagtgaagagtctgcaaatactgttaagaaagatcacgggggacaatccaag
agacccaaaatttattttgggacacgcacgcacaagcagattgctcagattactagagag
ctccaaaagacagcttactcaggggtccccatgactattctttccagtagggatcatacc
tgtgttcatcctgaagtgatgggcaacttcaacagaaatgaaaagtgcatggaattgctg
gatgtaaaacagggtaaatcctgctatttttatcatggtgtccatagaattaataatcag
cacacattgcagtcctttccgggaatgtccaaagcctgggacatagaagagcttgtcagc
ctcgggaggaaactgaaggcatgtccctactacacagctcgggaactgatagatgaggct
gacataatattttgtccctacaactacctcttggatgcacaaatacgggaaagtatggat
ataaagctgaaagaccaagttgtcattttagatgaagctcataacattgaagagtgtgct
cgggaatcagcaagctacagtgtaacagaagttcagcttaggtttgctcgggatgagttg
gacagtttgatcaacagtaatgtaaggaagaaaaaccatgagcccctacgagatgtgtgc
tataacctcattaattggttagaaacgaattctgaacatcttgtagaaagggactatgaa
tcatcttgtaaaatatggagtggaaatgaaatgctcctaagtttgtacagaatgggcatc
accaacgctacttttcctgttttgcagagacatttttcagctgttcttcaaaaagaagaa
aaagcctatggcaaagaggaagcaatacaaatacctatcattagtgcttcaactcaaata
atgctcaaaggactctttatggtgttagactatctctttagagaaaatagcagattcgca
gatgactataaaattgccattcaacaaacttactcctggacaaatcagattgctattttt
gataaaagtggggtcttggctgtaccaaaaaataagaaacattcacgacagaaaattgga
gttaatgtgctgaacttttggtgcttaaatccagctgtggccttttcagatattaatgac
aaagtacgaaccattgttctaacatcaggaacactgtcacctctgaaatccttttcatct
gagcttggggttacatttaacatccaactagaggctaaccatgttgtcagtaactcacag
gtttgggttggtactgttggctcaggaccccagggtcggaatctctgtgctaccttccag
catactgaaacatttgagttccaggatgaagtgggaatgcttttgttatctgtgtgccag
actgtgagccaaggaattttgtgctttttgccatcttacaagctattagagaaattaaga
gaacgttgggtttctactggcttatggcatagtttggagtcagtcaagacagtcattgca
gaaccccaaagaggagaaaaaactgattttgatgaattgctccaggtgtactatgatgcc
atcaagttcaaaggagagaaagatggagcccttctcatagcggtttgtcgtggcaaagtg
agcgagggtctggatttctcagatgataatgcccgtgctgtcgtaacagtaggaattcct
tttccaaatgtgaaagatcttcaggttgaattgaaacgacaatacaatgaccaccactca
aaattaagaggccttttgcctggccgtcaatggtatgaaattcaagcatacagagcccta
aatcaggctctaggcaggtgtattcgacacaaaaatgattggggagctcttattctggtg
gacgatcgtttcaacagcaatccaaaccgctatatatcaggactttctaaatgggtgagg
caacagattcagcaccactcaacctttgcaagtgccctggagtccctgactgagttttct
agaagacaccagaaagttactaatagatccaagaaagacaaggagtctaccctgaacgtg
gcctgtttggaggatagcactcttacaggtgtgtcaaaagcaagtcatctatcgccagaa
aattctagagaagaagaagcaaaactgtgtgtccaggagctgcaatgtccccagatgact
gctaaaaacccatcagtgccgagtcacgacatccccagaaggaagaaaagtgatccagta
ctaagagaggagtctgttcaaacaatgaaaacagagaaaaatgtcatttccagatcctca
agcccaactttcgggaagcaaacagagccagtcagctggcctgtcttcaagtccctgaga
cagcactttactaggaaagtaaagaatcagacacctgtgctcgggtcatcaaagagccat
gcctctggctcttccaccttcaaaacagaaaaaacagaagacagcactgctttgccacac
acaggtaaacgcgtgtcctcaaaggaaacagtgaatgcaccattcgcaccttgccctcag
tcagaaagcttatcgtcgatgaaggttgacattactcctgctgagaaccattccaaacag
ctgttctgctctgagaaagacgtgcatccgggtactgagtcgtctccagtaagtgaagat
gccaaccgttccagttcaagcgcagctatagaaacagaagcaggagatgactccctgagc
ctcacacctgaactctttgatcctgttgatactgatgaagaaaacagtgaaccagttgaa
actgatagatccagtaataattcagattgtttctcatctgaagacctttttgaaagtgta
actgacttcagccagaaatga
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