Clostridium gelidum: psyc5s11_17800
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Entry
psyc5s11_17800 CDS
T08447
Name
(GenBank) tetracycline resistance MFS efflux pump
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
cgel
Clostridium gelidum
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgel02000
]
psyc5s11_17800
01504 Antimicrobial resistance genes [BR:
cgel01504
]
psyc5s11_17800
Transporters [BR:
cgel02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
psyc5s11_17800
Antimicrobial resistance genes [BR:
cgel01504
]
Gene variants
Tetracycline resistance genes
Transporters
psyc5s11_17800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_1_like
MFS_2
FPN1
Motif
Other DBs
NCBI-ProteinID:
BCZ45713
LinkDB
All DBs
Position
complement(2057840..2058946)
Genome browser
AA seq
368 aa
AA seq
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MPFLLGNYLPASQIIVGMSALASVFAACTFFAAPIFGALSDRYGRKKILIISLLGSVIGY
ILFGIGRALWVLFLGRIIDGLTAGNISTLFAYIADSTEPQERTKWFSYIGAAMGIGCMIG
PALGGPLGAISITLPFFVTAGITFFSIICTYFFLPESLSPEKRSPHFSIKSFNVFDQFKY
IFTMKEVRALIIVGGFFYVGLGIYQFNFSIFLKDIFSWGPALIGGMFTIIGACDIISRAV
LLPRLLKKFSERNIGIVGLFGLALGLGLIILSINISSPVLIIAAVISITLGEGLFDPSYN
GRLSQSVDESSQGKLQGVNQSLQSAYRVLVPLAAAAIYSFSPGILYGVATCVIIGSLILF
SKLQPQYI
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
ttgccatttttacttggcaactacttgcccgcttcgcaaataattgtaggaatgagtgca
ttggcatcagtttttgcggcttgcaccttttttgcagcgccaatattcggggcattaagc
gatcgctacggtagaaaaaagattttaattattagtttactcggatctgttataggatat
attctgtttggtatcggtagggcgctgtgggtactctttctgggccgcataattgatgga
ctaacagcaggcaatatcagtacgttgtttgcttacattgctgatagcacagaaccccag
gagcgcacaaaatggtttagctatataggtgctgccatgggaataggatgcatgataggg
cctgcactgggaggcccgcttggtgccatttcaattacgctgccgtttttcgttactgct
ggtataacgtttttctccattatttgcacctatttctttctgccggaatcactgtctcct
gaaaaacgatcacctcatttttccataaaaagttttaatgtcttcgatcagttcaaatat
attttcaccatgaaagaggtcagagcgcttatcattgtcggaggattcttctatgtggga
ctcggaatctatcaattcaatttcagcatcttcttaaaagatattttctcgtggggacct
gcgcttatcggtggtatgtttactattatcggagcctgcgatattatttcgcgagctgtg
ttattaccgcgtcttcttaaaaagttcagtgagcgaaatattggtattgtcggtcttttc
ggactagcacttggattggggctgataattcttagcattaatatctcgtctccagtactt
attattgctgcggttataagtatcaccctaggcgaaggcttgttcgatccatcctacaac
ggacgactctcgcagtctgtagatgaaagtagccaaggaaaattacaaggtgtaaatcaa
agtttgcagtctgcttacagagttcttgttcctcttgcagcagcagctatatattcattc
agtccgggcattttatacggagttgcaacttgtgttataattggatccctcattttattc
tcgaaattacaaccgcaatatatttaa
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