Clostridium gelidum: psyc5s11_39440
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Entry
psyc5s11_39440 CDS
T08447
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
cgel
Clostridium gelidum
Pathway
cgel00190
Oxidative phosphorylation
cgel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
psyc5s11_39440
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
psyc5s11_39440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgel03019
]
psyc5s11_39440
Enzymes [BR:
cgel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
psyc5s11_39440
Messenger RNA biogenesis [BR:
cgel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
psyc5s11_39440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
BCZ47877
LinkDB
All DBs
Position
complement(4299953..4302001)
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AA seq
682 aa
AA seq
DB search
MDQINTYDNFFNRELSWLEFNQRVLDEAKDNTNPLLERLKFLAISSSNLDEFFMVRVGSL
YSQIQAGFEEREVSGLTPTEQVDKILHRVRKMVEDQYKTYEHLYDHLGAKNIRILKYDML
NEEQLKFVSDYYKNILYPVLTPMVIDSGRPFPLLLNKTLNIGVMLKGNKSEQEIFATIQV
PSVLERFVPIPGAQGENFVLLEDVIKNHISELFGFKVLTTACYRITKNADLSLNEEGAED
LLETIEESLKQRRWGLAVRLEIEDTNDNRIINKLEQEFEISDNQLFSINGPIDLTFINQL
YSIKGYKDLKFGPMKSLPIKELQGCDIFQAISKKDIFLHHPYESFSSVVKLVEAAAHDEK
VLAIKQTLYRVSGNSPVIAALSKAAENGKQVTVLVELKARFDEENNIHWARQLEKAGCHV
IYGVIGLKTHSKILLIVRKEKKGIKRYVHLGTGNYNDVTAKFYTDIGLLTAKPEYGEDAS
VIFNMLSGYFRPENMSKITIAPYGLRKKLEYLVERETEYAGKGKPAKIIAKMNSLVDKKL
ITALYKASQTGVKVILIIRGVCCLKPGVKGLSDNIKVRSIVGRYLEHSRIYYFFNDGKED
IYISSADWMYRNLDKRVETMTIIEEPIIKKELKEMLELYIKDNVKSRVLLPDGSYKKVEA
EGKNINAQEDMLELCKKFNNKG
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaataaacacatatgataatttttttaatagagagcttagctggttagaattt
aatcaacgggttttagatgaagcgaaagataatacaaatccccttttagaaagacttaaa
tttttagctatatctagttccaatcttgatgaattttttatggttagggttggatcgtta
tatagtcaaattcaggcaggatttgaagaaagggaagtttcaggattaacacctaccgaa
caagttgataaaatattacatagggttagaaaaatggtagaagatcaatataaaacatat
gaacatctgtatgatcatttaggagctaagaatataagaattttaaaatatgatatgtta
aatgaggaacaattaaagtttgtaagtgattactataaaaatatcctatatccagtatta
acacctatggtaattgattctggaagacctttcccattattattaaacaaaacattaaat
attggtgttatgttaaaaggaaataaaagtgaacaagaaatatttgcaactattcaagta
ccatctgtattagaaagattcgtaccgattccaggagcacaaggagaaaattttgtacta
ttggaagacgttataaaaaatcacataagtgaactctttggtttcaaagtattaacaact
gcttgctatagaataacaaaaaatgcagatttaagtttaaatgaagaaggcgcagaagac
ttacttgagactatagaagagtcgcttaaacaaagaagatgggggcttgcagtaagacta
gaaattgaagatactaatgacaatagaattataaataaattagaacaagaatttgaaata
agtgataatcaattattttctataaatggaccaattgatttaacatttattaatcaatta
tatagtataaaggggtataaggaccttaaatttggaccaatgaagagtttaccaattaaa
gaattgcaaggatgtgacatttttcaagcaataagtaaaaaagatattttccttcaccat
ccttatgaaagtttttcatctgttgttaaattagttgaagctgcggcacatgatgaaaag
gtactagctataaagcagacattatatagagtaagtggtaattcaccagtaattgcagct
ctttcaaaagctgcagaaaatggtaaacaagttacagtattagttgaacttaaagctagg
ttcgatgaagaaaataatatccattgggcaaggcaacttgaaaaagcaggatgtcatgtt
atatatggagtaataggacttaaaactcatagcaaaatattactaattgttagaaaagaa
aagaagggtataaaaagatatgttcatttaggaacaggaaattataatgatgtaactgca
aagttttatactgacataggactacttactgcaaaaccagaatatggagaagatgcatct
gttatatttaacatgctttcaggatattttagaccggaaaacatgagcaaaataaccatt
gcaccctatggactccgaaagaaattagaatacctagtagaaagagaaacggaatatgca
ggaaaaggaaaaccagcaaaaataatagctaagatgaattcattagtcgataaaaagctt
ataacagctttatataaggcttcacaaactggagttaaagtaattcttataattagaggg
gtttgttgcttaaaacctggagttaaaggattaagtgataatataaaagttagaagcata
gtagggagatatttagaacatagtagaatatattattttttcaatgacggaaaagaagat
atttatatatcaagtgctgattggatgtatagaaatctagataaaagagttgaaaccatg
acaataattgaagaaccaataataaaaaaagaacttaaagaaatgttggaactttacata
aaagataatgttaaaagcagagttttgctgcctgatggttcttataaaaaagttgaagca
gaaggcaagaatattaatgcacaggaagatatgctagaactttgcaagaaatttaataat
aaaggttaa
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