Carassius gibelio (silver crucian carp): 127934343
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Entry
127934343 CDS
T08819
Name
(RefSeq) ribosome biogenesis protein SPATA5L1-like isoform X1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgib03009
]
127934343
Enzymes [BR:
cgib01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
127934343
Ribosome biogenesis [BR:
cgib03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
127934343
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
AAA_22
RuvB_N
AAA_14
AAA_33
AAA_2
Vps4_C
bpMoxR
TIP49
AAA_7
RNA_helicase
Rad17
Mg_chelatase
AAA_28
NTPase_1
AAA_17
NACHT
AAA_18
AAA_11
TsaE
nSTAND3
Motif
Other DBs
NCBI-GeneID:
127934343
NCBI-ProteinID:
XP_052387615
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All DBs
Position
A18:complement(773987..778760)
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AA seq
758 aa
AA seq
DB search
MRIVSEMSLVEGLKVLPLDAVDSDTQRCRMGPALMSRLGLRLGAPVLIRVQRGVCLCTTW
PRHDLAEGFLQISTQCATPDLTAQTLTGLRVKPAHISALSCPRLSSVSVKVFVQRAEHKR
KVSERGVQQLLEGVYVHQGHLVDLSCVKSELVFVLVEKVNSGSQKAGLVTARTRVEVSEL
QTVKHLERRQEVSTPSLGGLEEVYASLKEIITLPLLYPGTLRQLGVSCPRGLLLIGPPGV
GKTLLVRRVARDIGATLVTVNGPEVTGSRPGESEENLRRVFDQAREAAEDGPCVLLIDEI
DSLCPRRTGSSGAPENRLVAQLLTLMDSIGSHEGFVIAGATNQPDALDPALRRPGRFDRE
VIVGVPSLLQRLSILKCVCGQMPLSSDVDLKAVAEMTCGYVGADLSALGREAALQAMRQT
QTGASEPLSMQHFMQALRIVQPSCLRSSLGATDFKPIGWEQIGGLDDVKLRLRQSIEWPM
RFPEALVRLGVSRPRGVLLYGPPGCAKTTLVKAAASSSHCSFLSLSGAELFSPYVGDSEK
TLAQLFAQARACAPSIVFLDEIDSMVGSRADGSSHSVQSQVLAVLLTELDGVGLRSVERR
SSGRKIALLEGEQEDTGLQQMELQEVCNKDVLIVAATNRPEVLDSALLRPGRLDQIIYVP
PPDLQARLAVLRVCTESVPLHQDVCLQDLAAQTELFSGADLENLCREAALLALREDGLQV
SSVRHKCFLKALQSLRPSLSPQQLQRHVQLFQSSSSSL
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaggatagtgtcagagatgtctctggtggagggtctgaaggttctcccgctggacgcc
gtggactcggacacacagcgctgtcgcatgggtccggctctgatgtccaggttaggtctg
aggctgggcgctccggttctgatccgggttcagcggggggtctgtttgtgcaccacatgg
cctcggcacgacctcgccgagggcttcctgcagatcagcacccagtgtgccacaccggac
ctcaccgcacaaacactcaccggactcagggtgaagccggcgcacatctcagcgctgtcc
tgccccaggctctccagcgtcagcgtgaaggtgtttgtgcagagagcggagcacaagcgg
aaggtgtccgagcgcggcgtccagcagctgctggagggtgtgtacgtgcaccagggtcat
ctggtggacctgtcctgtgtgaagagcgagctggtgtttgtgctggttgagaaggtgaac
tcgggctcacagaaagctggtctggtgacagcgagaacccgtgtggaggtcagcgagctg
cagaccgttaaacacctggagaggcgtcaggaggtctcgaccccgtctctgggcggcctg
gaggaggtgtacgcctcgctgaaggaaataatcacgttacctctgctttacccggggact
ctgcggcagctgggagtgtcgtgcccaagaggcctgcttctgatcgggccgcccggcgtc
gggaagaccctgctggtgcgccgcgtggccagggacatcggggccacgttagtgactgtc
aacgggccggaggtcacggggtctcgacccggagagagcgaggagaacctgcggcgggtg
tttgatcaggcgcgggaggcggccgaggacggtccgtgtgtcctgctcatcgatgagatc
gactctctgtgtccgaggcggacgggatccagcggcgcaccggagaaccgtctggtcgct
cagctgctgacgctcatggactccatcggcagtcacgagggcttcgtcatcgccggagcc
accaaccaaccagacgctctggacccggcgctccggagaccgggccggttcgacagagag
gtgatcgtcggcgttccctcgctgctgcagaggctcagtatcctgaagtgtgtgtgcggt
cagatgccgctgtcctctgatgtggacctgaaggctgttgctgaaatgacctgtgggtat
gtgggggcggatctgagcgcgctcggtcgagaagcagcgctgcaggccatgcgacagacg
cagacaggagcgagcgagccgctgtcgatgcagcacttcatgcaggcgctgcggatcgtg
cagccgtcgtgcctcaggagcagtttaggagccacagacttcaaacccatcggctgggag
cagatcggaggactggacgacgtcaaactcagactcagacagagtatcgagtggcccatg
aggtttcccgaggcgttggtgcggttgggtgtctctcggcccaggggtgtgcttctgtac
gggccgcccggctgcgctaagaccacgctggtgaaagcagccgcctcttcatcacactgc
agcttcctctccctcagcggagccgagctcttctctccgtatgtgggagactcggagaaa
acactggcacagttgttcgctcaggcgcgtgcgtgcgctccctccatcgtgttcctggat
gagatcgacagtatggtgggttctcgagcggacggttcctctcacagcgtgcagtcgcag
gttctggccgttctgctgaccgagctggacggagtgggactacgatctgtggagagacgc
agcagcgggagaaagatcgctctgttagaaggagagcaggaggacaccggactacagcag
atggagctgcaggaagtgtgtaacaaggacgttttgatcgtggctgccactaatagacca
gaggttctggacagcgctcttctcagacccggacgcctcgaccagatcatatacgtccct
cctccagacctccaggctcgtctggccgtgctgcgcgtctgcactgaaagcgtcccgctg
catcaggacgtgtgtctgcaggatctggctgcgcagaccgaactcttctctggagccgat
ctagaaaacctgtgcagagaggcggctctcctggcgctgcgtgaggacggactccaggtc
tccagcgtgagacacaagtgttttctgaaggcgcttcagagtctacgtccatcactgagt
ccacaacagcttcagcgacacgttcaactgtttcagagttctagtagttcactctag
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