Carassius gibelio (silver crucian carp): 127943261
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Entry
127943261 CDS
T08819
Name
(RefSeq) vascular cell adhesion protein 1-like
KO
K06527
vascular cell adhesion molecule 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127943261
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cgib04090
]
127943261
04091 Lectins [BR:
cgib04091
]
127943261
CD molecules [BR:
cgib04090
]
Proteins
127943261
Lectins [BR:
cgib04091
]
I-type lectins (Siglecs)
127943261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
ICAM_N
C2-set_2
C1-set
ICAM1_3_5_D2
zf-DNA_Pol
Motif
Other DBs
NCBI-GeneID:
127943261
NCBI-ProteinID:
XP_052395545
LinkDB
All DBs
Position
A22:complement(8597253..8606343)
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AA seq
1075 aa
AA seq
DB search
MNSALLLSLLLPVAVVSHVLDLPPKVLFKLGDRRELRCSMSSCPGKVKFVWKPLGDKPIY
ATIKTQDSVSVLVYDNVKKYHEYSLVCKATCEKETKQATATIQVYSFSRNPVISGHDSLK
LGEKNVLRCEVSSVHPPELLTVQWLYEGEVLQTNEGEPESNYIFTPSSEDDGKVITCRAS
LNVDGIPLDEKTKETSVHMTVFSAPHNVKVSGATAVPLGSSLNLTCEAEGEPKPAFTWTA
LKPDGQSVEMGKHRDLLVHNVSLSDAATYQCDVRNDFGSQRANVSVVVQAPPMNTLIEAS
PQSILKEGESVNISCKSSVVPVTHVVLSSRVNGAKIELASSKEAETSLALLSVNLTDSGE
FVCEAFNDYGSQETTLNLTVEAHLLEVVLQPDEVVLERGSRLVLSCQAFGCPQPKFSWKN
LSNKPILRLLETDDLQSQLVFDLVELEDEGTFLCEVTCGSIKKSKQTEVKVFSFSRNPVI
SGHDSLKLGEKNVLRCEVSSVHPLEHLTVQWLYEGKVLQTDEGEPKRDTFSSNYIFTPSS
EDDGKAITCRASLDVDGIPLDEKTKETSVHMTVFSAPHNVKISGATAVPLGSSLNLTCEA
EGKPKPAFTWTAFKPDGQSVEMGKHRDLLVHNMSLSDAATYQCDVTNDFGSQRANVSVVV
QAPPMNTLIEASPQSILKEGESVNISCKSSVVPVTHVVLSRRVNGAKIELASSKEAETSL
ALLSVNLTDSGEFVCEAFNDYGSQETTLNLTVEAHLLEVVLQPDKVVLERGSRLVLSCQA
FGCPQPKFSWKNLSKTPILRRLETDDLQSQLVFDLVELEDEGTYLCEVTCGSIKKSKQTE
VKVFYPPRVPRITVSPLTELKEGESVTISCLSDSFPVGRTVLNRVVDGIQTELMASDRLE
TLFTIPSLELDDSGIYICETSNMYGSRNDSVEITVKAPPRNMTVEIFPSTDVQEGQNITI
CCRSVSFPPPAVVLSKLDSEKHVYSLDGVFLLINLKPNDTGLYQINVTNYLGYETETFNI
NVIEKRVNPPFGWNDFFMPAISLGVAAALLGVVVYMWRARKKGSYDLAKCNPGTV
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgaattcagctttactgctgtctttgcttctaccagttgcagttgtttcccatgtactg
gacctgccgcccaaagttctgttcaaactgggtgacaggagagagttaagatgtagcatg
tcatcttgccccgggaaggtgaagtttgtttggaagccattaggagacaaaccgatatac
gctactattaaaacacaggacagtgtatctgtgctggtctatgacaatgtgaaaaagtat
cacgaatactccttagtgtgcaaagcaacctgtgaaaaggagacaaaacaggcgacagca
acgattcaagtttattctttttcaagaaacccagtaatatctggacatgacagcttgaaa
ctgggtgagaaaaatgtcctgcgctgtgaagtgtcttctgtacaccctccggagttactc
acagtgcagtggctctatgaaggtgaagttcttcagactaatgagggagaacctgagagt
aattacatattcacaccttcaagtgaggatgatgggaaggtgataacatgcagagcatca
cttaatgttgatggtataccacttgatgagaagaccaaggagacgtctgtacacatgaca
gttttctctgcaccgcacaatgttaaagtatctggagcgaccgccgtcccgctgggatcc
agtttaaatttgacctgtgaggccgagggcgagccaaagcctgcgtttacatggaccgct
ctcaaaccagatggccagtctgtggaaatgggaaaacatcgagatctcctcgtacataac
gtgtccctatcagatgctgctacttaccagtgtgacgttagaaatgactttggaagccaa
agggccaatgtttcagtagtcgttcaagcacctcctatgaataccctgattgaagcaagt
ccacaatccattctgaaggaaggagaatctgtgaacatttcctgcaagtccagcgtagtc
ccagtgacacacgtggtgctcagcagcagggtgaatggtgcaaaaatagagctagcgtct
agtaaagaggctgaaacatcattagccctcctctctgtcaatctgaccgactctggagag
tttgtgtgtgaggctttcaatgattatggcagtcaggagactactctcaatctaactgtt
gaagctcatttgctagaagtggtgttacaaccggacgaggtcgtgttggagagaggctcc
aggctggtcctctcatgtcaggctttcggttgccctcaacccaagttctcctggaagaat
ctttcaaataagccgatcctcaggctacttgagacggatgacttacagtcccagctggtg
tttgatctagtggagttggaagatgagggaactttcctttgtgaggtcacatgtggctcg
atcaagaagtccaaacagacagaagtcaaggtgttttctttttcaagaaacccagtaata
tctggacatgacagcttgaaactgggtgagaaaaatgtcctgcgctgtgaagtgtcttct
gtacaccctctggagcacctcacagtgcagtggctctatgaaggtaaagttcttcagact
gatgagggagaacctaagagagatacattttcaagtaattacatattcacaccttcaagt
gaggatgatgggaaggcaataacatgcagagcatcacttgatgttgatggtataccactt
gatgagaagaccaaggagacgtctgtacacatgacagttttctctgcaccgcacaatgtt
aaaatatctggagcgaccgccgtcccgctgggatccagtttaaatttgacctgtgaggcc
gagggcaagccaaagcctgcgtttacatggacggcttttaaaccagatggccagtctgtg
gaaatgggaaaacatcgagatctcctcgtacataacatgtccttatcagatgctgctact
taccagtgtgacgttacaaatgactttggaagccaaagggccaatgtttcagtagtcgtt
caagcacctcctatgaataccctgattgaagcaagtccacaatccattctgaaggaagga
gaatctgtgaacatttcctgcaagtccagcgtagtcccagtgacacacgtggtgctcagc
aggagggtgaatggtgcaaaaatagagctagcgtctagtaaagaggctgaaacatcatta
gccctcctctctgtcaatctgaccgactctggagagtttgtgtgtgaggctttcaatgat
tatggcagtcaggagactactctcaatctaactgttgaagctcatttgctagaagttgtg
ttacaaccggacaaggtcgtgttagagagaggctccaggctggtcctctcatgtcaggct
ttcggttgccctcaacccaagttctcctggaagaatctttcaaaaacgccgatcctcagg
cgacttgagacggatgacttacagtcccagctggtgtttgatctagtggagttggaagat
gagggaacttacctttgtgaggtcacatgtggctcgatcaagaagtccaaacagacagaa
gtcaaggtgttttatcccccgagagtgcccagaatcactgtgagcccactgacggaattg
aaggaaggagaatccgtgaccatttcttgcctttccgacagctttccagtggggcgtacg
gtgctgaacagggtggtggacggcatacaaacagaattaatggccagtgataggcttgaa
acattgtttaccattccttcgcttgagctggatgactctggcatctatatttgtgaaact
tctaacatgtatggaagccgcaatgatagtgtggagattacagtaaaagcaccacccagg
aatatgacagtggagatctttccatccacggatgttcaggaggggcagaatatcaccatc
tgttgtcgctccgtgagcttccctccacctgcggttgtcctcagtaagctggatagtgag
aaacatgtctactctcttgatggtgtattcctactgatcaacctcaaacccaacgacaca
ggcttatatcagatcaacgtcaccaactatctgggctacgagacagagacttttaatatc
aatgtgatagagaaaagagtcaaccctccatttggctggaatgatttttttatgcctgcg
attagcctgggagttgctgctgcgctgctcggtgttgtggtgtacatgtggagagctaga
aagaagggatcttacgaccttgccaaatgtaatccaggtaccgtgtag
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