Carassius gibelio (silver crucian carp): 127948641
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Entry
127948641 CDS
T08819
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A-like
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04020
Calcium signaling pathway
cgib04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
127948641
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127948641
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127948641
Ion channels [BR:
cgib04040
]
Ligand-gated channels
Glutamate (ionotropic)
127948641
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
127948641
NCBI-ProteinID:
XP_052401183
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All DBs
Position
A3:14695384..14825661
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AA seq
1459 aa
AA seq
DB search
MKLSTMGFSRLILLTLPALLTLFNISHAAEKVPILNIAVILGQTRYISDRDIRALWSKDD
PIDVNVVTLLVNETDPKSIITHVCDLMSGTKIHGVVFGDGTDQEAIAQILDFISSQTLIP
ILGIHGGSSMIMADKDVKSTFFQFGASIQQEALLMLNIMEEYDWHVFSIVTSKFPGYQDF
IAILKTTVDNSFVGWDLQHTITLDVVDGDSRTQIQLKRVQSPVILLYCSKDEAAYILEEA
RSLGLTGFGYIWIVPSSTTGNPDITPDTFPSGMISVSYDDWDYPLEARVRDGLGIITTAA
AAMLEEFGDIPEAKTSCYGQLEKTKLPPSVLHKYMMNVTWDGRDLSFTEDGYQVYPKLVV
IVLNKEREWEKMGKWENQSLTLKFPVWPRFNSFGDAETDDNHLNIVTLEEKPFVIVENVE
RRTGTCMRNSVPCRKHIKDNTTEGGGTYIKKCCKGFCIDILKKIARNVKFTYDLYLVTNG
KHGKKINNVWNGMVGEVVTKKAVMAVGSLTINEERSEAIDFSVPFVETGISVMVSRSNGT
VSPSAFLEPFSASVWVMMFVMLLLVTAMAVFMFEYISPLGFNRNLAQGKDPHGPSFTMGK
AVWLLWGLVFNNSVPVQNPKGTTSKFIVSIWAFFAVIFLASYTANLAAFMIQEEFADQLT
GLSDKKFQSPYSYSPPFRFGTVPNGSTERNIRKNYPDMHQYMVKYHQSGVNDALVSLKTG
KLDAFIYDAAVLNYMAGRDEGCKLVTIGSGYIFATTGYGIALQKGSAWKRSVDLAILAII
GDGEMEELEAQWLTGICHNEKNEVMSSQLDVDNMAGVFYMLATAMGLSLITFVWEHLFYW
RLRYCFTGICSGTPGLLFSISRGIWSCIHGVHIDMKKKSSDLDFSPQSNMLKLIKSAKQM
TNMTNLSGSRMNSPKRGGEFMHSASPMIMDMMAEKGNFIYTDNRSYAQKDIYGDSSELQA
YLANRHKDHLNNYIFQGQHPLTLNESNPNTVEVAVSEDTAQTNAKPRALWKKSVDTLRQT
QGSETLDPRLSMKSQRYLPEDTAHSDISDCSSRANSYKDPDNNKHLKAKDNLKKRSMTSK
YPRDCSEVELSYLNKKEGGAGREKIYTIDSDRELSLHSESQHYREGRGLTTDDLDFGEIY
SDHNDNYRKCDQPIIHLNSSPLHQSESDLLPESIYNKHYSMKEKNLSPHETNDRFKQTHC
RSCLSKVPNYSTGPYTALRSPYNRCEACLHMGNLYDISEDQMLQEAMINPGMHHDDMFSH
YWPQTDGPHVQRRNRLRLSRQHSFDNIMLEKPKEIDLNRPARSVSLKEKDRFLEDSSYAN
MFNIKADKLFGSRSMFFNRNLEESKRSKSLYPDYPSDNPFMQSVRDDTRLVHGRSSSDIY
KQLAPIKARNENNLRSSVKSTTSYCSRDGRIPNDMYISEHVMPYVANKTSAYSAPRVLNS
SQFSNRRVYKKIPSLESDV
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgagcactatggggttttccaggttgattcttctgactcttccagctctcctt
accctcttcaacatctcacatgcggcagagaaagtgcccatactgaacattgccgtgatc
ctgggtcaaacacgctacatctctgatagagatatacgggctctgtggagcaaagatgat
cccattgacgtcaacgtggtgaccctgctggtgaatgaaacggaccccaaaagcatcatt
acccatgtgtgcgatctcatgtctgggactaaaatccacggggtggtgtttggggacggc
acggaccaggaagccatcgcccagattttggattttatttcctctcagacgttgataccc
attctgggcatccatggcggctcgtccatgatcatggcagataaggatgtaaaatcgaca
ttcttccagttcggggcctccatccaacaggaggcgctacttatgctcaacatcatggaa
gagtacgactggcatgtcttctccatagtgaccagtaagtttccaggctaccaggatttc
attgccatcctgaagaccacagttgacaacagctttgtcggttgggacctccagcacacc
atcaccctggacgtcgtagatggggactccaggacccagatccagctgaagagggtgcag
tctccagtcatcctcttgtactgctcaaaggacgaagcggcttacatcttggaagaggcc
cgatcactgggcctgaccggtttcgggtacatctggatcgtgcccagctcgaccacgggc
aacccagacatcacaccagatacattcccctctggaatgatctctgtatcctacgatgac
tgggactatcctcttgaggcacgggttcgagatgggcttgggattataaccacggcagct
gcagctatgttggaagagtttggggacatcccagaggccaaaaccagctgctatgggcaa
ctggaaaaaaccaagttgccacccagcgtgttacacaagtacatgatgaacgtgacttgg
gacggcagagatttgtccttcaccgaggacggttaccaggtgtatcccaaactggttgtg
atcgtgctgaacaaggaaagagagtgggaaaagatgggcaaatgggagaaccagagtttg
actttgaaatttcctgtgtggcctcgcttcaactcttttggtgatgcggagacagacgac
aatcacctgaacattgtaactctagaggagaagccttttgtcattgtggagaatgtggag
cgccggacaggcacctgcatgagaaactctgtgccctgtcgcaaacacatcaaagacaac
accactgagggaggaggaacgtacattaaaaagtgctgcaaaggattctgcatcgacatc
ctcaagaaaatcgctcggaatgtgaagttcacctatgacctttacctagtgaccaacggg
aagcacgggaagaagatcaacaacgtgtggaatggcatggtgggagaggtggtgaccaaa
aaagcagtcatggctgtgggctccctgacaatcaatgaggagcgttcagaggccatcgat
ttctctgtccccttcgtggaaacagggattagtgtgatggtatcccgtagcaacggaacc
gtctctccatcagcgtttttagagcccttcagcgcgtctgtgtgggtgatgatgtttgtg
atgctgctgctggtgactgcgatggctgtcttcatgtttgagtacatcagccccctgggc
ttcaacaggaacctcgctcagggcaaagacccccacggaccatccttcaccatggggaaa
gcagtgtggctgttgtggggcctggtgtttaacaactctgtgcctgtgcaaaaccccaaa
ggcaccaccagtaaattcatcgtgtccatctgggccttcttcgctgtcatcttcctggcc
agttacactgccaacctcgctgccttcatgatccaggaggaatttgcggaccaactgaca
ggtctaagcgacaaaaagtttcagagtccctactcctactcccctcctttccgctttgga
acggttccaaatggcagcacagagaggaacatccgtaagaattaccccgacatgcaccag
tacatggtgaagtaccatcagtccggggtgaacgatgcactggtcagcttgaagactggt
aaactggatgccttcatatatgatgcagctgtgctgaactacatggctggtagggatgag
gggtgtaaactagtgaccattggtagtggctacatctttgctaccactggctacggcatc
gccctgcagaaaggatcagcctggaaacgctcagtggatctggccattctggctattatt
ggagatggtgagatggaggagttggaggctcaatggctgactgggatctgccacaatgag
aagaacgaggtaatgagcagccagctggatgtggacaacatggctggagtgttctacatg
ctggcgactgccatgggtctcagcctcattacctttgtctgggagcacctgttctactgg
agactcagatactgcttcactggcatctgctcgggcacacctggcctgctcttctccatc
agcaggggtatatggagttgcattcacggtgttcacatcgacatgaagaaaaagtcatct
gacctggacttcagtccacagtccaacatgcttaagcttatcaagtctgccaagcagatg
actaatatgaccaacctcagtggctccaggatgaactctcctaaacgtggtggtgagttc
atgcattcagcaagccccatgatcatggacatgatggcagagaaagggaacttcatctac
actgacaatcgtagctatgcccaaaaggacatctatggagactccagtgaattgcaggca
tatctggcaaaccgtcataaggaccatctaaacaactacatcttccaaggtcagcatccc
ctcaccctcaatgaatcaaaccctaatactgtagaggtggcggtgagtgaagacacagcc
cagaccaatgcaaaaccccgagctctgtggaagaaatctgtggatactttgcgtcaaact
caggggtctgaaaccctagatccccgtttgtccatgaagagtcagaggtacctgccagag
gacacggcacactccgatatctccgactgctcaagcagggcaaactcctacaaggatcca
gacaataacaagcacctgaaggccaaggataacttaaaaaaaagatcgatgacgtcaaaa
taccctagggattgcagtgaagtagagctgtcctacttaaacaaaaaggagggcggagca
ggcagagagaaaatatacaccatagattctgaccgggagctgagtctgcactcagagtca
caacactacagagaaggcaggggcctaacaactgatgatttggattttggcgaaatttac
tcagaccacaatgacaattacaggaaatgtgaccagcccatcatacatctcaatagcagc
cccctacatcaaagtgaatcggatctgctgccggaaagcatttataacaaacactacagc
atgaaggagaagaatctcagtcctcacgaaaccaacgaccggttcaaacagactcattgc
cggagctgtctttctaaggtacccaactatagcactgggccgtacactgccctaagatca
ccgtataaccggtgcgaggcatgcctccacatgggcaacctgtatgacatcagtgaggac
caaatgctgcaggaggccatgatcaaccctggcatgcaccacgatgacatgtttagccac
tactggcctcagacagatgggccacacgtacagaggaggaacagactgaggctcagccgc
cagcactcctttgacaatatcatgcttgagaagcccaaagaaattgacctgaaccggccg
gcgcggagcgtcagcctaaaggagaaggaccgcttcctggaggatagctcttatgcaaac
atgtttaacatcaaggctgacaaactattcggcagcaggtccatgttctttaaccgaaac
ctggaggaaagcaagcgtagtaagtcactttaccctgattacccctcggacaaccccttc
atgcaatctgtacgggatgacactcgcttggtccacggcaggagctcctctgacatttac
aaacagttggctcccatcaaagctaggaacgagaacaatctgaggtcctccgtgaagtcc
accacttcatactgttccagggacggtcgaatacccaatgacatgtatatttcagagcat
gtaatgccttatgtagccaacaagactagtgcatactcagctccccgggttctcaactct
tcgcagtttagcaatagacgagtgtataagaaaatacctagtctcgagtcagatgtttaa
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