Carassius gibelio (silver crucian carp): 127951765
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Entry
127951765 CDS
T08819
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04020
Calcium signaling pathway
cgib04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
127951765
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127951765
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127951765
Ion channels [BR:
cgib04040
]
Ligand-gated channels
Glutamate (ionotropic)
127951765
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
127951765
NCBI-ProteinID:
XP_052405728
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All DBs
Position
B3:28599036..28657069
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AA seq
1399 aa
AA seq
DB search
MGVHLGCLSDTLWLPLLLLLSVLCAPRCQCRPFGMVEPTVNVAVVFSGSAYQMEIKGRLS
RENFLDLPLEVNPITVLVNNTNPRTLLTRICDTLAANRVHGVVFEDNIGSEAVAQILDFI
STQTAVPIVGISGGSAVVLPHKGVGSSFLQLGSSVQQQIAGMFKMMEEYNWDSFVVVTSL
YPGYDTYVDYIRSYIDTSYFLWEMQDILTFDMLADGLNDLRARRLLQQIDAQVLLVYCSH
DEAQYLFTMAREVGLVGPGYIWFIPSLAVGNPNMPPPDSFPIGLISIITDRWKMSLRNRV
RDGVAIVVKGVESFRKQRGFIPDGHMDCLSPERPSTNDTLFRHMLNVSWENTDFSFNSDG
YLVNPSMIIITLDRGRQWDKVGNYESGILQMRYPVWPRYGTFLETVSDNRHLTVATLEER
PFVIVEAVDPVTGTCLSNTVPCRRQSNKTETIVGHTEPYTKLCCKGFCIDILKKLSRNIK
FSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSVPFVETG
ISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRSLVSAK
DPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAF
MIQEQYIDTVSGLSDKKFQKPQDQYPPFRFGTVPNGSTERNIRSNYPEMHSHMVKYNQKG
VEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKESRWK
RPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAMGLSL
LVFAWEHLLYWKLRHSVHNSERLDFLLAISRGIYSCFNGVEDIDRNGNMQSPDVTTSYTQ
ANMLKMLQTAKDIVSSARVENSLDNATKTIENWSRRDPEAARPSLPTCLIGTDFSHSRLP
CIASVMDNHSYPQNMDSTTQHLLEKPHMGTHPTSLRYTLPARTTHHHIYERTLPISSLSS
PHIAMRDPPPPTAPKPHVYVDQSCHHPTSRYVSYRDFQVPDIFVEHQEPSGSQKQYMAGL
GRKKRSHSYVAASPETGRRGDYDVPQSCLADLKSNHLVENHSHTTPCMRSQFQRPGSSCN
SCTKLYLEPEMDDVPLLGKDKMNRRASFLRATWSGDRIRQLDEKPSTSASSTSCINMPDL
FPRVVVNNPKPSKMYSSSGNNLRYNMAVEPAYLDPAHMGTYPYKPQKFKYSKSIRLPSYR
EAILKNTAALRRSSSTLVHGHYSTYLNSYTDMPVYLGPLPQGPAHFHEHSKDTCHLFPCV
NHCPENAALVPRLGSRPVFYQSTAVGGYEGARRSNEESLHTVPVSSVRRDHRQVLVARNV
HSPYAPRPWGRVSSLESEV
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcatctaggctgtctcagcgacacactgtggctgcctttgctgctgctgctg
tctgtcctctgtgccccccgctgccagtgccgcccgttcgggatggtcgagcccaccgtg
aatgtggcggtggtgttcagtggctccgcctaccagatggagatcaaggggcgactgagc
cgggagaacttcttggacctgccgctggaggtgaaccccatcactgtgctggtgaacaac
accaacccgcgcaccctactgacgcgcatctgcgacacgctggctgctaacagggtgcac
ggggtggtctttgaagataacattgggtccgaggccgtggcgcagatcctagacttcatc
tcaacgcagacggccgtgcccatagtgggcatcagcgggggatctgccgttgtcctgcct
cacaagggtgttggttcttccttccttcagctgggctcttccgtccagcagcagatcgcc
gggatgttcaagatgatggaggagtacaactgggacagttttgtggtggtgaccagcctg
taccctggctatgacacctatgtggactacatccgctcctatatcgatacgtcttacttc
ctctgggagatgcaggacatcttgacatttgacatgttggccgatggtttgaacgacctc
cgtgcccgccggttacttcagcagatcgacgcgcaggtgctgctggtgtactgctcgcac
gacgaggcccagtacctcttcaccatggccagggaagtgggtttggtgggtccggggtat
atctggtttatccccagccttgcagtgggaaaccccaatatgcctcctccagacagcttc
cccattggattgatcagcattatcaccgatcgctggaagatgagcttgagaaacagggtc
agggatggtgtagccatcgtggtgaaaggagtggagagcttccgcaaacagagagggttt
attcctgacggacacatggactgtctgagtccagagcggccatccaccaatgacactctc
ttcagacatatgctgaatgtttcttgggagaacacagacttttccttcaacagtgatgga
tatctggtcaacccttccatgatcataatcactctggaccgcgggagacagtgggataag
gtggggaattatgagtctggtatcctgcagatgaggtatcctgtctggccacgttatggg
accttcctggagactgtgtctgataaccgtcacttgacagtggccacactggaggaaagg
ccttttgtgattgtcgaagctgtggatcctgtcactggcacctgcctcagtaacactgtc
ccctgcagacggcagtcaaacaagaccgaaacgatagtcgggcacactgagccttacacc
aaactatgctgcaaaggtttttgcatagacatcttgaaaaagctctctcgcaacatcaag
ttctcctacgacctctacctggtcaccaacggcaaacatggcaagctggtacgagggatc
tggaacggtatgattggagaggtgttttataagcgagcggacatggccattggctctctg
accataaatgaggagcgctctgagatcattgacttctctgtgccgtttgtggagaccggc
atcagtgtgatggtggccagaagcaatggaactgtatctccatcagccttcctggagccc
tacagcccagcggtgtgggtcatgatgtttgtcatgtgtcttacagtcgtggcggtgact
gtgttcgtgtttgaatacttcagtcctgtgggctacaaccgtagcctggtcagtgccaaa
gatccaggtggtccgacgttcaccattgggaagtcggtctggctgctgtgggggatcgtc
ttcaataactcagtgcccattgaaaaccccaaaggcaccaccagtaagatcatggtgctg
gtgtgggctttctttgccgtgatcttcctggccagctacacagccaacctggcagccttc
atgatccaggagcagtatattgacactgtttctggactgagtgacaagaagttccagaaa
ccacaagaccaatatcctccattccggtttgggaccgtgcccaatggcagcacagaacga
aacataaggagcaattatcctgaaatgcattcccacatggttaagtacaaccagaaaggt
gtggaggatgcgctcaacagcctcaaaactgggaagctggatgccttcatatacgatgca
gctgtgcttaactacatggctggtaaagatgaagggtgtaaattggtgacaatcggtagt
gggaaggtatttgcaacaacaggctacggtatcgcccttcagaaagaatctcgctggaag
cgccccatagacctcgctcttctccagttccttgctgatggtgacactcagaagctccag
acagtgtggctcactggtatctgtcgtaacgagaagaaggaggtgatgagctctaagctc
gacattgacaacatggccggagtgttttacatgcttctagtggccatgggtctcagtctg
ctggtctttgcctgggaacatctactatactggaagctacggcattctgtccacaactct
gagcgcttggacttcctgttggctattagcaggggaatctacagttgcttcaacggtgtg
gaggacattgaccgtaacgggaacatgcagagcccagatgtcaccaccagttacactcag
gccaatatgctgaaaatgctccaaaccgctaaggacattgtctcatctgcaagagttgaa
aactccctggacaatgccacaaagaccatcgaaaactggagtcgacgtgatccagaggca
gccagacctagccttcctacctgcctcatagggacggacttcagccatagccgcctgccc
tgcatcgccagtgtaatggacaaccactcgtaccctcaaaacatggatagcaccacacag
cacttgctagagaagcctcacatgggaacacatcctacctcactccgctacactcttccc
gcacgcaccacccaccaccacatctacgaacgaacactacccatatctagcctcagcagt
ccccatattgccatgagagacccaccacctcccacagccccgaaaccccatgtgtacgtg
gaccagtcctgtcaccaccctacctctcgctacgtctcttaccgtgactttcaggtacca
gacatctttgtggaacaccaggaaccttcgggaagccaaaaacaatacatggcaggtctg
ggtcgcaaaaagaggtcccacagctacgtagcagcatctccggaaactggccgaaggggc
gactatgatgttccccagtcttgtctggctgatctcaaaagcaaccacctagtggaaaac
cattcccataccacaccctgcatgagaagccaattccagagacctggctctagctgcaac
tcctgcacgaagctgtatctagaaccggagatggatgatgttcctcttctggggaaagat
aaaatgaaccgccgcgcctcttttctcagggctacatggagtggtgacaggatccggcag
ctggatgagaagccctccacctctgcatcctctaccagttgcatcaacatgcctgatctg
ttccctcgagtggtggtgaacaatcccaagccttcgaagatgtacagcagcagtggtaac
aacctacgctacaacatggctgtggagccagcctatctggacccagcccacatgggcacc
tacccttacaagccacagaagtttaagtactcgaagtccatccgccttccttcataccgg
gaagccattctaaagaatacggcagcccttcgacgctcctcttccacactagtgcacgga
cactattcaacgtacctgaactcttacacagacatgccggtgtatttgggtcctcttccg
caaggacctgctcacttccatgagcattccaaagacacgtgccacctgtttccatgtgtc
aaccattgcccggaaaatgccgctttggttccccggttaggcagcagacctgtgttttac
cagagcactgctgttggaggctacgagggggccaggcgctcaaacgaagagtcgttgcac
actgtaccagtctcttccgtgcgcagggaccacaggcaggttctagtggcacggaacgta
cacagtccctatgccccacggccctggggtagggtatctagtctggagtcagaggtttga
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