Carassius gibelio (silver crucian carp): 127953949
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Entry
127953949 CDS
T08819
Name
(RefSeq) retinoic acid receptor alpha-B isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127953949
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cgib03310
]
127953949
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127953949
Nuclear receptors [BR:
cgib03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
127953949
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
127953949
NCBI-ProteinID:
XP_052409282
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Position
B3:19342295..19449816
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AA seq
451 aa
AA seq
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MYESVDVVGLTPSPNPFLSMDYYHQSRGCLIPEKGLVSGAARGFRTPHWSGSNHSVETQS
TSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMLYTCH
REKSCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKRKKEEKKQECSESYVLSPDTV
QMIERVRKAHQETFPSLCQLGKYTTNNSADHRVALDVDLWDKFSELSTKCIIKTVEFAKQ
LPGFTTLTIADQITLLKAACLDILILRICTRYTPDQDTMTFSDGLTLNRTQMHNAGFGPL
TDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEQSDKVDVLQEPLLEALKIYVRK
RRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGLEGGGA
RGGGGKGAPPGSCSPSLSPSSTHSSPSAHSP
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtacgagagtgtggacgttgttgggctgacccctagtccgaacccgtttttaagcatg
gattactaccaccagagccgcggctgtctgatcccggagaaaggcctcgtgtcgggagcg
gcgcgcggcttcaggaccccgcactggagcggctccaatcactctgtggagacccagagc
acaagctcagaggagatcgttcccagcccaccttctccacctcctccaccacgggtctac
aagccctgtttcgtctgccaggacaagtcctcgggctaccattatggagttagtgcttgt
gaagggtgcaagggctttttccgaaggagcattcagaagaacatgctgtacacctgccac
agagagaagagctgtatcatcaacaaggtcacccgaaaccgctgccagtactgccggctg
cagaagtgcctggaagtgggcatgtctaaagaatctgttcggaacgaccggaacaagagg
aagaaggaagagaaaaagcaggagtgttcggagagttacgtgttaagtcctgatacggtg
cagatgatcgagcgggtcaggaaggcccatcaggaaaccttcccctctctgtgccagctg
ggcaaatacaccaccaacaacagtgcagaccacagggtcgctctggatgtggacctgtgg
gataagttcagtgaactctccaccaaatgcattattaagacggtggagttcgccaagcag
ctgccgggcttcaccacactcactatcgcggatcagatcaccctgttaaaggccgcctgt
ctcgacatcctgattctgcgaatatgtacacgctacacaccggatcaggacaccatgacg
ttttcagacggtctgacactgaaccgcacgcagatgcacaacgccggcttcggtccactg
acggatctggttttcgctttcgccaaccagctcctgcctctggagatggatgatgcagag
acggggctcctcagcgccatctgtctgctgtgtggagaccggcaggatctggagcagtcg
gataaggtggatgtgcttcaggagccactgctggaggccctgaagatctacgtgagaaag
aggaggcctcataaaccacacatgttccccaagatgctgatgaagatcacagacctgagg
agcatcagcgctaaaggagccgagcgagtaataactctgaaaatggagattcccggctcc
atgcctccactcattcaggagatgctggagaattcggagggtctggagggcggcggggcg
agaggaggaggaggaaaaggagcgccaccaggaagctgcagccccagtttgtctccgagc
tcaacacacagcagcccctcagctcactccccctga
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