Carassius gibelio (silver crucian carp): 127964128
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Entry
127964128 CDS
T08819
Name
(RefSeq) hepatocyte nuclear factor 1-alpha-like
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127964128
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
127964128
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
APP1_cat
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
127964128
NCBI-ProteinID:
XP_052420248
LinkDB
All DBs
Position
B8:19872454..19879748
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AA seq
570 aa
AA seq
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MEGGEGRRAGGERSSRLSALQEQLVWSLLGSGLSKELLIQAMGDLERERASAGAERMDRA
DGESSEEGDMDNPPPIFHELERLPPEEAARQRAEVDQLLQEDPWHMAKMIKSYMQQHNLP
QREVVESTCLNQSHLSQHLNKGTPMKNQKRAALYSWYVKKKAEINQQFTNASRGVMSGEE
SGDDVRKGRRNRFKWGPASQQILFQAYERQKNPSKEEREGLVEECNRAECLQRGVSPSQL
AGLGSNLVTEVRVYNWFANRRKEEAFRNKLALDVPYSSQSAPSTGQTLPSSPSPVLKYSQ
PVLKYNHSVVCEGLGTVRSSSGEDRGGGARLASPLQLEPSHTLLDTHHHKPASCGGSLPP
VSTLTSLHGVSGPSAAPSGLIMASLPSVMSLGDSSLFIGLTSSQPQTVPVINNVGGGFTT
LQPISFQQQFHASPQQPITQQLQSHICPSSFMATMAQLPCHMYSKADLSSYSSSLLSQAM
VIADSNSIGTLTNLTAVRQILTSDPEGHSDTPIEEESLHLQSTSPEPVSSGSLELYPQTH
TSETHPSHLLSSPSGDLDPYMPTQMVSTAQ
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggagggaggagaggggagaagagcaggaggagaacgaagcagccggctgtcggcccta
caggagcagcttgtgtggtctctcctgggatcagggctgtcaaaagagctgctgatccag
gccatgggagatctggagcgagaacgggcctcggccggcgctgagaggatggatcgggct
gacggcgagagctcggaggagggagacatggacaatccacctcctatcttccatgagctg
gagaggctaccgccggaggaggccgcgaggcagagagctgaagtggaccagctgttgcaa
gaggatccttggcacatggctaaaatgataaaaagctatatgcagcagcacaacctacca
cagagagaggtggtggagtccacatgcctcaaccaatcccatctctcccagcacctcaac
aagggcacacccatgaagaatcaaaagagggctgctctgtacagctggtacgtcaagaaa
aaggcagagattaaccagcaattcaccaatgcaagtcgaggtgttatgtcaggagaggaa
tctggggatgatgtaagaaagggacggaggaatcgattcaaatggggcccagcatcccaa
caaatcctgttccaggcctacgagcgacagaaaaaccccagtaaggaggagagggaggga
ctggtggaggagtgcaacagagcagagtgtcttcagaggggtgtttctccatctcagctg
gctggtctaggctctaatttggtcacagaggttcgtgtttataattggtttgcaaatcgg
cgtaaagaggaggcatttcgcaacaaactggcactggacgtgccctatagcagccaatca
gctccctcaacaggccagacgctaccatcgagtccttcaccagttctgaagtacagccag
cctgttctgaagtacaaccattcagtggtttgtgagggtctgggtacagtgagaagctcc
agtggtgaagaccgaggtgggggcgctcgtctagctagtcctcttcagctagaacccagt
catacactgctggatacacaccatcacaaaccagcatcttgtggtggctccttacctcca
gtcagtactctcacttccctgcatggcgtgtcaggaccctctgctgctccttcaggactg
atcatggcctccctaccaagtgtaatgagtctaggggactcctcacttttcataggcttg
acgtcctctcaaccacagacagtccctgtcatcaataacgtagggggaggcttcactacc
cttcagccaatctcgtttcagcagcagtttcacgcctcacctcagcagccaataactcag
cagcttcagagccacatttgcccaagctccttcatggcaacaatggcacagttaccatgc
cacatgtacagcaaggcagatctgagctcttactcctccagtctcctgtcccaggccatg
gtcatcgcagacagcaacagcatcgggacactgactaacctcacagctgttcgacagatt
ctcacctcagatcctgagggtcactcagacactcccattgaagaggagtctttacatctg
cagtccacttcacctgagccagtgtcttctggcagtttggagctctatcctcagacacac
acaagtgaaacccatccttctcacctgctctcctctccatccggagatttagacccttac
atgcctacacagatggtctctactgcacaatag
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