Carassius gibelio (silver crucian carp): 127969162
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Entry
127969162 CDS
T08819
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib00310
Lysine degradation
cgib01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
127969162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127969162
03036 Chromosome and associated proteins [BR:
cgib03036
]
127969162
Enzymes [BR:
cgib01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
127969162
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
127969162
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
127969162
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
127969162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_3rep
Zn-ribbon_8
zf-met
Motif
Other DBs
NCBI-GeneID:
127969162
NCBI-ProteinID:
XP_052426892
LinkDB
All DBs
Position
B12:15994579..15999118
Genome browser
AA seq
849 aa
AA seq
DB search
MSDSPDLPPSDEQNLDIQGSVTICSSIVMEEEEDSMFNDQHFYCEMCHQHFIDQCEVHGP
PLFTCDSPAAMGIPQRALLTLPQGLVIGRSSISNAGLGVFNQGQTVPLGMHFGPFDGELT
SEEKAMDSPFSWVIYKGNNQYTYIDAERDTHSNWMKFVVCSRSEMEQNLVAFQQNGRILF
RCCRPISPGQEFRVWYAEEYAQGLGIIWDKIWDKKSISLGPTEEAATQDCLCPYCHYSFP
TVVYLRVHVKRSHPDEYAHFMQTQPLESVDIDHLASDAAPPTHVQPTIESCQDQISTPNG
QPIHQSEKSDCIDLSDTCSNGLSDQANCVAEVSDEINKCGECGRNFLRSCHLKRHQRTIH
SKEKPYCCSHCRKCFSQATGLKRHQQTHQGEEQREEVADRPSDVYPCTKCSFSFVAKSNL
HQHLKQHHHGEYLRLVESGSLTAGTEGEMETNSDKHDPTYEPPTRAKRPMKNTLRGRSHP
KKVSVGRPRGRPPKNKRAAQDEVFMCSECEQRFSDLETLKTHQCVGQDNNKIDEPQEAAD
SKHVCGECLRGFSSFDLLKAHECIQLGDGSYCCSHCNLYFNRLCNLRRHERTIHSKEKPY
CCTLCLKSFTQSSGLKRHQQSHSRRKGHRQSSALVDASIFPCTHCPFSFTDEHYLYKHIR
RHHPEMSVKYLSFQEGGVLSVEKPHSCSQCCKSFSTIKGFKNHSCFKQGEKVYLCPDCGK
AFSWFNSLKQHQRIHTGEKPYTCQQCGKSFVHSGQLNVHLRTHTGEKPFLCSQCGESFRQ
SGDLRRHEQKHSGVRPCQCPDCGKSFSRPQSLKAHQQLHNGTKLFPCTQCGKSFTRRYHL
TRHLQKMHS
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagtccggatttgccaccaagcgatgagcagaatttagacatacaaggctct
gttactatttgttcttctattgtgatggaggaagaggaggatagcatgtttaatgaccaa
catttctattgtgagatgtgtcaccagcacttcattgaccagtgtgaggttcatggtcca
ccattattcacatgtgactcaccagcagctatgggcattcctcagagagctctgctgacg
ctgccgcaaggcttggttataggtcgatcaagcatctccaatgcagggcttggggttttc
aaccaaggtcagactgtgccattggggatgcattttggaccttttgatggagagttgact
tccgaggaaaaggcaatggatagtcccttctcttgggtaatttacaaaggcaataatcag
tatacttacatagatgcagagcgagacactcactctaactggatgaagtttgtggtgtgc
tcaaggagtgagatggagcaaaatcttgttgcatttcagcaaaatggacgtattctgttc
cgttgttgtcgccctataagcccagggcaggaatttagagtttggtatgctgaagaatat
gctcaaggacttggcatcatctgggataagatctgggataagaaaagcatttctctaggt
ccaactgaagaggctgcaactcaggactgtctatgtccttattgccattactccttcccc
acagttgtttatctgcgtgttcatgtgaagcgctcgcaccccgatgagtatgcacacttt
atgcagacacagccactagagtctgtagacatagaccatctggcttctgatgcagctcct
ccaacccatgtccagccaacaatagaaagctgtcaggatcaaatttcaaccccaaacgga
caacccatccatcagtcagaaaagtcagactgcattgatttgtctgatacgtgcagtaat
ggtttaagtgaccaggcaaactgtgttgctgaggtctcggatgaaattaataaatgtggt
gagtgtggccgtaactttttgagatcttgtcatctgaagagacatcagcgcactattcac
tccaaagagaagccttattgctgcagccattgcaggaagtgctttagtcaagcaacaggg
ctgaaaagacaccaacaaacccaccagggggaggaacagagagaggaagttgctgacaga
ccttctgatgtatacccttgcacaaagtgctccttttctttcgtggccaaatccaattta
catcaacatctgaaacagcatcaccatggagagtacctcaggttagttgagagtggctcg
ctcacagcagggactgagggtgaaatggagacaaattctgacaagcatgacccaacctat
gaacctcctactcgagcgaagaggcccatgaagaacactttgagaggcaggagtcaccct
aaaaaagtgtctgttggccgaccaaggggacgaccacctaaaaacaagcgtgcagctcag
gatgaagtgtttatgtgctcagagtgtgaacaaaggttctctgatttagagacacttaaa
actcaccaatgtgtgggacaggataataataagatcgacgaaccacaggaagcagcagat
tctaagcatgtctgcggtgaatgtctgagaggcttcagtagttttgatcttctcaaagcc
catgagtgcattcagctgggagatggatcctactgttgctctcactgcaacctttacttc
aaccgtttgtgtaaccttcgtcgccatgagcgcaccatccactccaaggaaaagccctac
tgctgcaccctgtgcctcaagtccttcacccagtcttctggcttgaagcgacaccagcag
agccactcacgccgcaaaggccaccgccagagctcagctcttgttgatgccagcatcttt
ccctgcacacactgccccttctccttcaccgatgagcactatctttacaaacacatccgc
cgtcaccatccagaaatgagtgttaaatatctgagtttccaagaagggggagtcttgtcc
gttgaaaagcctcacagctgcagccagtgctgcaagagctttagcacaatcaagggcttc
aagaaccacagctgcttcaagcagggggagaaggtgtatctgtgcccagattgcggaaag
gcattcagttggtttaatagcctcaagcaacaccagcgcatccacacaggagaaaagcct
tacacgtgtcagcagtgcggaaagagttttgtccactctggacaactgaatgtgcacctt
cgcacgcacacgggtgaaaaacctttcctgtgttcacagtgtggcgaaagcttcaggcag
tcaggagatttgaggaggcatgaacagaagcattcaggcgtgcgcccgtgccagtgccct
gattgtggaaaaagctttagtcggccacaaagtctcaaagctcaccaacagcttcataat
ggcaccaaacttttcccgtgcactcagtgtggaaaaagctttactcgtagataccatctc
acccggcatctccagaaaatgcactcctga
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