Carassius gibelio (silver crucian carp): 127986927
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Entry
127986927 CDS
T08819
Name
(RefSeq) vascular cell adhesion protein 1-like
KO
K06527
vascular cell adhesion molecule 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127986927
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cgib04090
]
127986927
04091 Lectins [BR:
cgib04091
]
127986927
CD molecules [BR:
cgib04090
]
Proteins
127986927
Lectins [BR:
cgib04091
]
I-type lectins (Siglecs)
127986927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Izumo-Ig
ICAM1_3_5_D2
C1-set
ICAM_N
TNFR_16_TM
Motif
Other DBs
NCBI-GeneID:
127986927
NCBI-ProteinID:
XP_052445143
LinkDB
All DBs
Position
B22:complement(24422178..24429830)
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AA seq
852 aa
AA seq
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MTPPPFSYKSDPELNERKHIKSALLSLLELFGCSSEVDSMDSALLLTLLLPVAVVSYVLD
LPPQVLFKVGDRRQLSCRMSSCPEKVKFAWITLEDRPIFATIDTQDRESVLVFDSVMKNH
ENTLLCKAMCGKETKQAKTQIKTYSFPKKPVISGYDRLKLGEENILRCEGSSIHPSEMLE
VQWLYGDTVLQSYEGQSERDAYSLPLKFTPSEEDDGKAITCRASLRVDNIPADEMTKETS
APMTVLSAPHNVKVSGATGVLRGSNLTLTCEAEGKPKPAFTWTALKPDGSSVEMGKHHDL
FIQGVSLSDTGTYQCDVSNDLGNQKTSVSVVVQAPPMDTYIAVSPQSTLKEGDSVNISCK
SIGVPVPYVVLSRMVNGVKTEILSSEGPEISVTIDSVKLADSGMFLCEAFNDYGKQNENL
TLTVEAHLLEVALQPDVEVVLEKGSSLILSCQASGCPQPKFSWKNLSNMPILRRPKTDGF
RSQLVFDRVELEDEGTYLCEVTCGSIKKSKQTEVKVFSFPTSPVVKNSGPSLVGEMMKLT
CTAQEVFPANIFQILWMDGEREMHSETGPFSSGTINLTSEYSYHVNTTDQDKRITCKVSL
KMHGVPAAQAVKTASTTLSVHYPPRATSITVSPLTELKEGESVSISCLSDSFPVGRTVLS
RVMNGVQTKIMTNDSLETLYTIPSVELEDSGVYVCETSNMYGSHNDSVEITVKAPPRNTT
VEIFPSKDVQEGQNITICCRSVSFPPPMVVLSKLDSEKNVYSLDGVFLLINLTPNDTGLY
QINVTNYLGYETEIFNISVMEKRVNDPLGWNDFLIPVICLGVAAALLGLVVYVWRARKKG
SYDLTKCNLSTV
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgacccctccccccttctcctataaatcagatccagagctgaatgaaagaaagcacatt
aagtcagctttgctctcgctcttggagctcttcggatgttcttcagaagtggacagcatg
gattcagctttactgttgactttgcttctgccagttgcagttgtgtcctacgtcctggac
ctgccgccccaagttctgttcaaagtgggcgacaggagacagttgtcttgcagaatgtct
tcttgcccggagaaggtgaagtttgcttggatcacattagaagacagaccgatttttgcc
acgattgacacacaggacagagaatctgtgctggtctttgacagcgtgatgaagaatcac
gaaaacaccttactgtgcaaagccatgtgtggaaaggagacaaaacaggcaaaaacgcag
attaaaacttattcttttcccaaaaagccagttatatccggatatgatcgcttgaagctg
ggcgaggaaaacattttgcgctgtgaaggatcttctatacacccttcggagatgctcgaa
gtgcagtggctgtacggagacactgttcttcagtcgtatgagggacaatccgaaagagat
gcatattcacttcctcttaaattcacaccttccgaagaggatgatgggaaggcaataaca
tgcagagcgtcactgcgtgtggataatataccagcggatgagatgaccaaggaaacgtct
gcacccatgacagttctctctgcaccacataacgttaaagtctctggagcgaccggcgtc
ctgcggggatccaatttgactttgacctgtgaggccgagggcaagccaaagcctgcgttt
acatggacggctcttaaaccagatggctcatctgtggaaatgggaaagcatcacgatctc
ttcatccaaggcgtgtccttatcggatactggtacttatcagtgtgatgttagcaatgac
ttgggaaatcaaaagaccagcgtttcagtagtcgttcaagcacctcctatggacacctac
attgcagtaagtccacaatccactctgaaggaaggggactctgtgaacatttcctgcaaa
tccatcggtgttccagtgccgtacgtggtgctcagtaggatggtgaatggtgtaaaaaca
gagatattgtctagtgaaggacctgaaatatcagttaccattgattccgtcaagctggcc
gactctggcatgtttctgtgtgaggctttcaacgattatggcaaacagaatgaaaatctc
actctaactgttgaagctcatttgctagaagtggcactacaaccagacgtcgaggttgtg
ttggagaaaggctctagcctgatcctctcctgtcaggcttcaggttgtcctcaacccaag
ttctcctggaagaatctttcaaacatgccgatcctcaggcgacctaagacagatggcttc
cggtcccagctggttttcgatcgagtagagttggaagacgagggaacttacctttgtgag
gtcacgtgtggctcgatcaagaagtccaaacagacagaagtcaaagtgttttcatttcca
acgagtcctgtcgtgaaaaattctggaccttctctggtgggagagatgatgaaactgacc
tgcactgctcaggaagttttcccggccaatattttccaaatcttgtggatggatggagag
cgagaaatgcattcggaaactgggccattttcaagtggtacaataaatctgacttcagag
tattcttaccatgtaaacaccacagaccaggacaaacgcatcacctgcaaagtttcgctg
aaaatgcacggtgtgccagctgctcaagcagtaaagacagcatctactacactgtccgtt
cactatcccccaagagcaaccagcattactgtgagcccactgacggagttgaaggaagga
gagtctgtgagcatttcttgcctttctgacagctttccagtggggcgcacagtgctgagc
agggtgatgaatggtgtacaaacaaagataatgactaatgatagtcttgaaacattgtat
accattccttcggtcgagctggaggattctggcgtctatgtttgtgaaacctctaatatg
tacggaagccacaacgatagtgtggagattactgtgaaagcaccacccaggaatacaaca
gtggagatctttccatctaaagatgttcaggaggggcagaatatcaccatctgttgtcgc
tccgtgagcttccctcctcctatggtggtcctcagcaagttggatagcgagaaaaatgtc
tactctcttgatggggtattcctgctgatcaacctcactcctaacgacacaggcctttat
cagatcaacgtcaccaattacctgggctatgagactgagattttcaatattagtgtgatg
gagaaacgagtcaacgatccattaggctggaatgattttctaatacctgtgatttgcctg
ggagttgctgctgcgctgcttggtcttgtggtgtacgtgtggagagccagaaagaaggga
tcgtacgaccttacaaagtgcaatctgagcactgtgtag
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