Carassius gibelio (silver crucian carp): 128008819
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Entry
128008819 CDS
T08819
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1-like isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04020
Calcium signaling pathway
cgib04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
128008819
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128008819
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
128008819
Ion channels [BR:
cgib04040
]
Ligand-gated channels
Glutamate (ionotropic)
128008819
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
SIP
DUF6724
DUF3663
NYN
Motif
Other DBs
NCBI-GeneID:
128008819
NCBI-ProteinID:
XP_052448867
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All DBs
Position
A5:27430432..27455812
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AA seq
900 aa
AA seq
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MRLVLFAFLISCSCARGGCEPKTVNIGAVLSQKRYEQVFKDAVTQANNIYGKDKFKMNAI
SVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAQVWFDMMREFQWNHIILIVSDDHEGRAAQKRLETL
LEERETKSKNRNYENLDQLSFDNKRGPKAEKVLLFSQDTNLTALLQEAKELEARVIILSA
SEDEAAAIYKAARQLNMTGSGYVWLVGEREMSGKALSEAPDGLLGLQLINGKNESAHIYD
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPDGLTGRVEFNDD
GDRRFAHYSILNYQKTRLVQVGVYNGSQVVMNTQRKIIWPGGETEKPKGYQMSTRLKIVT
IHQEPFVYVKPTLRDGTCKEEYTVNGVLIKKVICTGPNETIPGRPTVPQCCYGFCIDLLI
KLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
VAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPYPTDITGQLNLSDPSVSTVV
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctggttctgttcgctttcctcatctcgtgctcctgtgcgagaggcggatgcgaa
cccaagactgtgaatattggggctgtcctgagccagaagagatatgaacaagtgttcaaa
gacgctgtcacccaagccaacaacatatacggcaaagacaagttcaagatgaatgccatt
tcagtcacccataagccaaacgccatccagatggcactctccgtgtgtgaggatctcatc
tctaaccaggtgtatgcgatcttggtgagccacccaccccagtccaacgaccatctgact
cccactccagtgtcctacacagctggtttttaccgtatccctgtagtgggcctcaccact
cgcatgtccatctactccgataagagcatccacctctccttcctgcgcacggtgccaccc
tattcccaccaagcccaagtgtggtttgacatgatgcgtgagttccagtggaatcacatc
atcctgattgtgagtgatgaccacgagggcagagcagcacaaaaaagactagaaaccctg
ctggaggagagggagacgaagagtaaaaacaggaactatgaaaacctcgaccaactgtcc
tttgacaacaagcgaggacccaaggcagagaaagtgctcctgttcagccaagacacaaat
ctgacggctctgctccaggaagccaaagagctagaggcccgagttatcatcctgtctgca
agtgaagacgaagctgcagccatttacaaagcggcacgccagctcaatatgacaggctct
ggttatgtatggctggttggagaaagggagatgtctggtaaagcactgagtgaagcccca
gatggcttgctcggccttcagcttatcaatggcaagaacgagtctgcgcacatctacgat
gccgtggctgtggtggcccagtccattcaggagctctttgagaaggagaatatcacagag
cctcctcgaggctgtgttggcaatacaaacatctggaagactggcccactcttcaaacga
gtgctgatgtcatccaagtatccagatggcctgacaggccgcgtggagtttaatgatgac
ggagacaggaggttcgcccactacagcattctgaattaccagaaaacccggcttgtgcaa
gtgggcgtctacaatggctcacaagttgtaatgaacactcagaggaagattatttggcca
ggaggagagactgaaaagccaaaaggctatcaaatgtcaacacgattgaagattgtcacc
attcaccaagagccctttgtctatgtgaaaccaacactacgagatggaacatgtaaggaa
gagtacactgtaaatggagtcctgatcaaaaaagtgatctgcactggccctaatgagacc
attccaggtcgccccacagtgcctcagtgttgctatgggttctgcattgaccttttaatc
aagcttgcaatgacaatgaacttcacctatgaagtgcatctagtcgccgatggcaaattt
ggcactcaggagcgtgtaaataacagcaacaagaaggagtggaatggcatgatgggagag
ctcctgagtggtttggcagacatgattgtggctccacttacaatcaacaatgaacgagcc
cagtatatagagttctcaaaaccgttcaagtaccaggggctcacaatacttgtcaaaaag
gaaataccacgcagtacactggactcgttcatgcagccttttcagagcaccctgtggtta
ctggtgggtctatcggtccatgttgtggcggtgatgctctacctattagaccgtttcagc
ccgtttggaagatttaaagtaaatagtgaagaggaagaagaagacgccctcaccttatcc
tctgctatgtggttctcctggggtgtacttctgaactccggcattggagaaggtgcccct
cggagcttttcagcaaggattttaggtatggtgtgggctggttttgctatgattatagtt
gcatcttatactgccaatttggcagccttcctagtgctggatcggcctgaggagcgcatt
accggcatcaacgaccctaggctgcgaaacccatcagacaagttcatctacgccacagtg
aagcagagctctgtggacatttacttccgacgccaagttgagctaagcaccatgtaccgc
cacatggaaaagcacaactacgagagcgctgctgaagccatccaggccgtgcgagacaac
aaactccacgcgtttatatgggattcagcagtgttggagtttgaggcctcgcagaaatgt
gacctggtcaccacaggcgagctatttttccgctctggatttggtatcgggatgcgtaaa
gacagcccatggaagcaaaatgtctcactggccatcctcagttcccatgagaatggcttc
atggaggacttggataaaacctgggtccgttatcaggagtgtgactccagaagcaatgca
ccagccacactcacatttgagaatatggcaggcgtgtttatgttggtggctggtggtatc
gttgctgggatcttcctcatcttcattgagattgcatacaaacgacacaaggatgcgcgc
aggaagcagatgcagctggcttttgcagcagttaacgtctggaggaagaacttacagcca
tatcctacggacattaccggccagctcaacctgtcagacccctctgtgagcacagtggtg
tga
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