Carassius gibelio (silver crucian carp): 128017269
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Entry
128017269 CDS
T08819
Name
(RefSeq) nectin-4-like isoform X1
KO
K06593
poliovirus receptor-related 4
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
cgib04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
128017269
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
128017269
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
128017269
Cell adhesion molecules [BR:
cgib04515
]
Immunoglobulin superfamily
Nectin family
128017269
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Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
I-set
ig
Ig_2
C2-set_2
EzrA
Protocadherin
ECSCR
DUF5305
TMEM154
DUF4446
TMEM210
SPX
Motif
Other DBs
NCBI-GeneID:
128017269
NCBI-ProteinID:
XP_052458530
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Position
A7:32264486..32280462
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AA seq
608 aa
AA seq
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MKTVTYILAVLIIWNSAACVSGDQEQFVEPPESPWALQSVAEEETRLPCRFNVSNSKIHL
VQVTWVRVNSNGGEDQIIIAHYTDGQTENPAYLGRVRFATSDPIRDSTLIIMGTRTIDEG
KYICKVATFPIGNFETEILVTVWTKPITSLTPFVLVENQSFRPAAICRSVAKPMAGLSWD
TELAGQSQNRSIDGEVASIQFSLHPLRNMNGQKLDCLVWHPSQKTPERISNNLVVHYPPN
ALISGYEGDWYAEMQGAALHCTGQGNPEPQEFSWMRKGEALPEGVTVDGGSLLFPRPLSL
TDKGVYVCTTTNLVGSGKAEIAINISESILPPNYVLIIVIAGVAAVVVVTLIIVIISVNR
YYKRKNQQLATELDAKKEEISTLSRQASIRRVNSGSTDNRYSDDNNHLRVEGTIRTSLSS
LDRPRSRDSRSTLGGLDTLGRPVIYNTSRRGREKFIDRTERESTRLMMESYEMDSNMSQA
IEIVRSRNGSAILPAEGRPQSGGSSRGGSRGHNSPLISTYPTLTDEEENGSVSPADSGVH
RGLMEPDGFENGGSETASSQISEALSSHFENTNGILRPKSKPNNILLPAHTTLFLQAHSP
PIHRAQIV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagttacatatattcttgctgtactgatcatctggaactcagcagcctgtgta
agtggagaccaagaacaatttgtagagccccctgagtccccctgggctctgcagtctgtg
gcagaggaggaaacacgcttaccctgtcgattcaatgtatccaacagtaagatccatttg
gtgcaggtgacgtgggtacgagtaaactcaaatggaggggaagatcagattatcattgct
cattacactgatggccagacagaaaaccctgcatacttgggacgtgtacgatttgcaacc
agcgacccaataagagactctactctgattattatgggcacacgtactatagatgagggc
aaatacatctgcaaagtcgccaccttccccattggaaactttgagactgagattttggtc
actgtgtggactaaacccattacgtcgctgacgccgttcgtcctggttgagaaccagtcg
ttccgtcctgcagctatatgccgttcggtggctaaaccgatggcaggcctctcctgggac
acagagctcgcgggacagagtcagaaccgtagcatagatggtgaggtggcttctatccag
ttttctctccaccctctccgtaacatgaacgggcagaagctggactgtctggtctggcat
ccatcgcagaaaactccagagaggatctccaataaccttgtagtacactaccctccgaat
gcattaatatctggctatgagggcgactggtatgctgaaatgcaaggagctgcgctgcac
tgcactggtcaaggaaatccagaacctcaggaattcagctggatgaggaaaggtgaagct
ctgccagaaggtgtgactgtggacggtggcagtctgctctttcccaggcccctgagcttg
acggataagggagtttatgtctgcaccaccaccaatctggtgggatctggaaaagctgag
attgcaataaatatatcagagtcaatcctcccaccgaactacgtgctcattattgttatt
gctggtgttgctgcagtggttgttgtcactcttatcatcgtgatcatttcagtaaaccgc
tactataagcgcaaaaatcaacagctggctacagagctggatgcaaaaaaggaggaaatc
agcaccctatcaagacaagcctcgattaggagagtcaactcgggaagcacagacaacaga
tactcggacgacaataatcatttaagagtcgaagggacaatacgcacgagtctctcctca
ctggatcgtcctcgctccagggatagtcgttccaccctgggagggctggacacactcggt
cgccctgtaatttataacacatccagaagaggtcgagaaaaattcattgaccgaactgaa
agagaatccactcggctgatgatggagtcttatgagatggacagtaacatgtcacaggct
attgaaattgtccggtcccggaacggcagcgccattctcccagcagaggggaggccgcag
tctggaggaagtagcagaggaggcagcagaggccataattcgcccttaatatccacatac
cctactcttacagatgaggaggaaaatggttccgtgagtcctgcggattcaggagtccac
agaggtttaatggagcctgacggttttgaaaatggcggcagcgagacggcgagttcacag
atatctgaggcactatccagtcattttgagaacactaacggcatactgcgacccaagtcc
aaacccaataacatccttcttccggctcacacaacacttttccttcaagcacatagccca
cctatccacagagctcagatcgtttag
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