Carassius gibelio (silver crucian carp): 128018085
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Entry
128018085 CDS
T08819
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib00310
Lysine degradation
cgib01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128018085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128018085
03036 Chromosome and associated proteins [BR:
cgib03036
]
128018085
Enzymes [BR:
cgib01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
128018085
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
128018085
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
128018085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
SET
zf-C2H2_4
zf-C2H2_11
Zap1_zf1
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
128018085
NCBI-ProteinID:
XP_052459425
LinkDB
All DBs
Position
A8:28173882..28193113
Genome browser
AA seq
548 aa
AA seq
DB search
MKVHHHHHHHPSSVLLLQSDMLKPGEPSGSAFLKVDPTYIQHWQQLFPQNSALKAASLPP
PVPQRPSLISSSSSSSSASPAGHIALLGHPLSSDAAGGSSQAKELCLSSNFKNDKGSRLK
LSSEELDYYLYGQQRMEIIPINNHNGELNNRCDMCADNRNGECPMHGPLHSLRRLVGTSS
SSVTAAPPDVPDWLRDLPREVCLCTSTVPGLGYGICASQRIPQGTWIGPFQGVPLPLDKV
QSGSVRNTRHLWEIYDQEGTLQHFLDGNEPSKSSWMRYIRCARHCGEQNMMVVQYRSCIF
YRACADIPRGTELLVWYNDSYTSFFGIPLQCVAQDENLNVPSSVMEAMSRQDSLQPFSKS
PKPSSSSLLPRSMVFPQTPCSRSFSLLDKSHVESSLSQMSGKNQRVLASPTSTSQLSSDF
SDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDR
PFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPISE
SSESIEVD
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtccaccaccaccaccatcatcatccatcatctgtgctgctgttacagtcggac
atgctgaagccgggcgagccgagcgggtctgctttcctcaaagtggacccgacctacatc
cagcactggcagcagctcttcccgcagaacagcgcgctgaaagccgcttctcttccgcct
ccggtgccgcagagacccagcctgatctcctccagctcctccagctccagcgcgtctccc
gcgggtcacatcgcgctgctcggacacccgctgagctccgacgccgccggaggatcgtct
caagccaaagaactttgtttgtcgtccaactttaagaatgataaaggctcgcgactgaag
ctgagctccgaggagctggactattatctgtacggacagcagcggatggagatcatcccg
atcaacaaccacaacggagagctcaacaaccgctgtgacatgtgtgcggacaaccgtaac
ggagagtgccccatgcacggacccctgcactcgctgcggaggctggtggggaccagcagc
tcttcggtgaccgctgctcctccagacgtcccggactggctcagggatcttcctcgtgag
gtgtgtctgtgcaccagcaccgtcccgggtctgggatacggcatctgtgcgtcccagcgt
atcccacagggcacctggatcgggcccttccagggcgtcccgctgccgctggacaaggtg
cagtcgggatccgtgcgaaacacaagacacttatgggagatctacgatcaggagggaacc
ttacagcactttcttgacgggaacgagcccagtaagtcgagctggatgaggtacatccgc
tgcgccagacactgtggagagcagaacatgatggtggtgcagtacaggtcgtgtatcttc
taccgggcgtgtgcagatattcctcgaggaacagagctcctggtttggtacaatgacagc
tacacgtctttcttcgggatcccgctgcagtgcgtcgcacaagacgaaaacctgaacgtg
ccgtcttctgtcatggaggcaatgtctcgtcaggactcgctccagcccttcagtaagagt
cccaaaccctcgtcttcctcgctgctgccgcgctccatggtcttccctcagacgccctgc
tctcggagcttctctctgctggacaagagtcacgtggagtccagcctgagtcagatgagc
gggaagaaccagcgagtgctggccagccccacgtccaccagccagctgagctccgacttc
agcgactggcatctgtggaagtgtggccagtgcttcaagaccttcacgcagaggatcctg
ctgcagatgcacgtgtgcacgcagaaccccgacaggccgtatcagtgcggtcactgctcg
cagtcgttctcgcagccgtccgagctccgcaatcacgtggtcacacactccagtgaccgg
cccttcaagtgcggctactgcggccgagccttcgccggagccaccacgctcaacaaccac
atccgcacacacaccggggagaagcctttcaagtgtgagcggtgcgagcgcagcttcacg
caggccactcagctcagcagacaccagcggatgcccaacgagtgcaaacccatcagcgag
agcagcgaatcaatcgaggtggattaa
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