Colletes gigas: 122401809
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Entry
122401809 CDS
T07492
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
cgig
Colletes gigas
Pathway
cgig03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122401809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgig03019
]
122401809
Messenger RNA biogenesis [BR:
cgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122401809
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
ZapB
YabA
Sec10_N
NDUF_B5
Motif
Other DBs
NCBI-GeneID:
122401809
NCBI-ProteinID:
XP_043260114
LinkDB
All DBs
Position
Unknown
AA seq
2384 aa
AA seq
DB search
MDQTDENEHNALREVLSDEELTQIPEEFVKKLNTYFKDKFEQYITAKAVFETNRKSFDQT
LDKLQKDLVEEKSNFQEYKEKLDVAEKFNAELQTNLDEAKSEIHKLQENVKRLEKENVDL
RRYRDTIVDERDALQLQVERRDTEIERMHTELSSLGSQLQKAVTTKCQVLAETEEIRSRD
MTLDFKEKRLEQERTLLLQQMSGLEEELVKRTSELQTARSEASARSFLTETRLAQRDEEL
RIANEAMSQLRESYALIQKRCDEFAQKLEGQRSHEISIHASYREEITAQTRLADLYKGMA
DEANAKAEEFSTAVKELQELLEHATEQYGKLETTHNQLQLQHKENLEEKERKIDELSKEL
NHANELLKSIKQERLDQAVEQLAPTAAITSRVLRKGLSLTQIYTQLVDATNELTSEREEN
ERLKSHMEVILRELEDKAPILQQQREDYETAMTNIATLTSRLDELLAENHKLQEVADEAN
RIAKHHTKENQRLKTELSDLARQVCFLLKEVQESRSGATIHSNEFSNSMDVDNLASSEII
SKKLVTFKDIEELQENNQKLLSIVRTLSSRQEEIEKATDEINSGEMKEKLDRYLEQLEDM
QAAQDRQGKMLEGLLRQRDMYKNMYQQCLKQTNMSEKKDASIISEEDTKEMDGEKVVKDE
SSKITQDDANKEKELKKQLIECESKLKQVTDEYDIYRKEKAAHERMLGEEVERLRKEAEA
SSARCCRLKAQLDSANDRFNLLQANVSSYKSQIKVLEEKCFNYNVTIGKHEQSLMILKDE
TLAAKMHSSRAEVQLENLRQETQFLRGSEERLLKEREVYERERQTQALLQADVEFIKASL
ERVQAEGQLRAEQRLDDATRECAALRRRLQEEQDRFRELTSHLERQLATTQERLTEERNI
TEQIRVELEQTRQSDSQNTQRIEELNIKLRQAVNHSISKPISGDENLVKRLKELELQLAT
TQAEAKSLSEQLKAARQQGQQYCDIAESAEAQLRELTTQHNKCKEDLETALKEARVEIMS
LQKRVQDLVEELAKVSSGRQETDSVLREKLADAERKLEELDEVKGELEIIKGDLYTASVT
AKEAEEKYAREMVLHSADLQTLAKLKEEAQTVDKKMTTLTQERNSAVETLELAKSACNER
EKKLLDEMEGIQQRVNDLDAQNAILHTQIQELSEKTAIMHSQQTKMSSQESPDTSLEAMN
RSFSGLEDDSKSAEQLLRVMKYLRREKDLAVTKFDVLRAENLRLKSQMEVLEKRVKESEA
VLNSEREKSEIDVVTTSKHAELLRKVETLNAIADSNRILREERDSLSAKVSELTAKVAAL
SEEVVPLRDTTRDMQVKIEALLQENTSLKAEATRWRQRANALVERANKTSPEDWRRLQTE
RENLSKLLTSERETHAKRAEEFNQLKTEKTKLEEQLIQLQKQLQAQGEQVQKVSEEARKL
SLDLNEALADSTSKAKDLATLRKELGDKEVVLNDIKNKEIQIRKIAKKYKTQFEELAKTV
EEEKNRSEESRIAAGTSGSEDSAYVSQEREDQLREEGRAELRQVNIDLTSKVDELSRQMV
VVQNEADLLKKEIDTMNKTSVEKEERAKQVLKGARTKIMQLTESKKICEKELLDLKAKVE
AGDTESDAAEHDARLVALKSQMEGRISRLEHEKSEIQAEKDSLSQRVNQLQRQLAGVSGV
SATTEPPTANIKPMSARAETPLASIRPMSVVVQSRTAAVLPTTASAPVMVAPHQQQQSQQ
QVVHTTETSSPTSSLPDFQPASTSSSSQTAPSTLRQLVVQPQLSESAESTQREDPEIAET
LNVQQQQCQQQQQQQQQQQTVALVSPRVEQQQQQQAVASDQQQTVASSSTQSVSTSQAST
GHKRPRTLDSTASGSGIVESADHSRQEQVLSPKTKRTRQEIASTASASASEVEYQVPTSS
QRDQDEEVEEGCVVVVDCDEGEGGGNHQTQEEEEFDNDPYEEMEEEEEMPYEVEVEVERD
NNEVEIIMGEDSTSVEVPRQAQATVPTNQQQQQSEAISSAGPTGEPPTSFATRSSRGIAP
MPRQQQQQHLLLPQQGYEDGGDDSIVPSTPTLFVPRRGDGFGEAVSSPQVPQGRFTFGDS
SAPTTASSTPSLSTPSGSTTRTIFGSSSSGAAQVVQESMDDTRMDLAQSEDGGTGRSVPT
TPLQVSPAADLPPSTSSGPSEEQETPVSVTPVSVTGTTVDDTSEEPAIPSICVVGVDDQQ
HSQTEIITESISTTPTEGTSSESEKRTEEAGPLISGDDDAVDTGEGTEEPGSDIVEDEVE
EESREAEASPSSNTRQRAMAAAAAAAAAATAANGTRSATARRSSRSPFRATRGTRPTPIV
WESQSGRGQAVVRGGHGGRGSNNETGRGRGTRRRMRSKFPYARF
NT seq
7155 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaacagacgaaaacgaacacaatgcgttgcgagaagttttaagcgacgaagaa
ttaacacaaattccggaagaattcgttaagaaattaaacacgtactttaaagataaattt
gaacagtatattacggctaaagcagtttttgaaactaataggaaaagctttgatcaaact
ttggataaattacaaaaagacttggttgaagaaaaatcaaactttcaagagtataaggaa
aaattagacgtggcagagaaattcaatgctgaattacaaactaatttagatgaagctaag
agcgaaatacataaactacaagagaatgttaaaagattggagaaggaaaatgtagattta
cgcaggtacagagatacaatagtcgatgaaagagatgcgttgcaattacaggttgaacga
cgagacacagaaattgaaagaatgcatacggaattatcttctctaggtagtcaactacaa
aaagctgttactacaaaatgtcaagttctagcagaaacagaggaaattcgaagtcgcgat
atgactcttgatttcaaggagaaacgtctagagcaagaaaggacacttcttctgcaacaa
atgtcaggccttgaagaggaattagtaaaaagaacatcagaattacaaacagcaagatca
gaagcttctgcgcgatcatttttaaccgaaactcgtttggcacaacgcgacgaagaatta
cgtattgctaatgaggcaatgtcgcaactacgagaatcatatgcattaattcaaaaacgc
tgtgacgaatttgctcaaaaattagaagggcagcgttctcacgaaatttctatacatgct
tcctatagagaagaaattacagctcaaactagattggccgatctttataaaggaatggca
gatgaagcaaatgcaaaagctgaagaatttagtacagcggttaaagaacttcaggaatta
ttagagcatgccacagaacaatacggaaaactagagactacgcataatcaacttcaatta
cagcacaaagaaaatttagaagaaaaggaacggaaaatagacgaactttcgaaagaatta
aatcacgcgaatgaattacttaaaagcattaaacaagagagattagatcaagctgttgaa
caacttgcaccaacagcagcaataactagtcgcgtgcttaggaaaggcttgagtcttaca
cagatttacacacaattagttgatgcaacaaacgaattaacttccgaacgtgaggaaaac
gaacgactgaagtctcacatggaagtcattttacgtgaattagaagataaagcacctatt
ttacaacaacaacgtgaagattatgaaactgctatgactaatattgcaactcttacatca
agattagatgaacttttagcagaaaaccataagttgcaagaagtagcggatgaagcaaat
cgtattgctaaacatcatactaaagaaaatcaaagattgaagacagaactgtcagattta
gcaagacaagtgtgcttccttttgaaggaagttcaagaaagtagaagtggtgcaactatt
cattcaaatgaattttcaaattcaatggatgtggataatcttgcttcgtctgaaattatc
agtaaaaagcttgtgacttttaaagacatcgaagaattacaagaaaataatcaaaaatta
ttatcgatagtccgtacattatcgtcgaggcaggaagaaattgagaaagcaaccgatgaa
ataaattctggtgaaatgaaggaaaaattagataggtatttagaacagttagaagatatg
caagctgcgcaagacagacaaggaaaaatgttagagggccttttaagacagcgagatatg
tataaaaatatgtatcaacaatgtttgaaacagacaaatatgtcagaaaagaaggacgcc
tccatcatatcggaagaagatacgaaagagatggatggggaaaaagttgttaaagatgag
tcatctaaaattactcaggatgacgcgaataaagaaaaggaattgaaaaaacaattaata
gaatgcgaaagtaaattaaaacaagttacagatgaatatgatatttatagaaaggaaaaa
gcagcgcatgaacgaatgttaggagaagaagttgaaagacttagaaaagaagcagaagca
agttcagcccggtgttgtagattgaaagcacaattagattcagctaatgatagatttaat
cttttacaagcaaacgttagttcttacaagtctcagataaaagttctcgaggagaaatgt
tttaattataatgttacaatcggcaagcacgaacaaagtttaatgattctgaaggatgaa
actttggctgctaagatgcattcgtctcgagctgaagtgcaattggaaaacttacggcag
gaaacacaatttttacgcggctctgaagaacgccttttaaaagaacgcgaagtgtacgag
agagaacgtcaaacgcaagctttgttgcaagcggacgttgaatttattaaagctagttta
gaacgtgttcaagccgaaggtcaactacgtgccgagcaacgtttggatgatgctacgagg
gaatgtgcagctttgagacggcgattgcaggaagaacaagaccgatttagagaattaacg
tcccatttggaaaggcaactcgcaacaacacaggaacgacttaccgaggaacgtaatata
actgaacaaattcgtgtagagttggaacaaacccgtcaatctgattcccaaaatacacag
cgcatagaggaactcaatattaaacttagacaagccgttaatcattcaatatcaaaacct
atcagtggcgatgaaaatctcgtaaagagactaaaagaacttgaattgcaacttgcgacg
acacaagcagaagcgaaatctttgtcagaacaactgaaagccgcgcggcaacagggccaa
cagtattgcgatatagccgaaagcgcagaagcacaattaagagaattaactacgcaacat
aacaagtgtaaagaggatttagaaaccgcgttaaaagaagcacgggtagaaataatgtct
ttgcaaaagagagtacaggatttggtagaagaattagcaaaagtttccagcggtagacaa
gaaaccgactctgtattaagagaaaaattagccgacgcagagaggaaacttgaagaatta
gacgaagttaaaggagaattagagatcattaaaggcgatttgtatactgcttcggtaacg
gcaaaagaagcagaagagaaatatgctagagaaatggtattgcattcagcagatcttcag
acgttagcgaagttaaaagaagaagcacaaacggtagacaaaaagatgacaacattgact
caggaaagaaattctgctgtagaaactttagaacttgcgaagtcagcttgcaacgaaagg
gaaaagaaattgcttgacgaaatggaggggatacaacaaagagtaaatgatttggatgca
caaaatgctattttacatacgcaaattcaggaattaagcgagaaaactgcaattatgcac
agtcaacaaacgaaaatgagcagccaggaaagtcccgacactagtttagaagcgatgaat
cgtagttttagtggccttgaagatgattctaaatctgcagaacaattgctaagagtgatg
aagtatctgagacgcgagaaagatttggctgtaacgaaatttgacgttttgagggcagag
aaccttcgattaaagtcccaaatggaggtcctagagaagagagtaaaggaaagcgaggct
gttctaaattcagaaagagaaaagtcagaaatcgatgtagtgaccacgtctaagcacgcg
gagctactacgaaaagttgaaacattaaacgcgattgctgattctaacagaattctgaga
gaagaaagagacagtctaagtgcaaaggtttcagagcttactgcgaaagttgctgcgctt
tcggaagaagttgtgccacttcgagacacgacgcgagacatgcaagtgaaaatagaggct
ttgttgcaggaaaatacaagtcttaaggcggaggcaactagatggaggcaaagagctaac
gcattggtggagagagctaacaagacaagtccggaagattggcgtagattgcaaaccgaa
cgcgaaaatcttagcaaactgctcacttccgaacgtgagacgcacgctaaacgcgcggaa
gaattcaatcaattgaaaacggagaaaactaaattggaagagcaactgatacaactccag
aaacaattgcaagcacaaggggaacaagttcagaaagtctccgaggaagcgcgtaaatta
agtttggatttgaacgaagcacttgctgattctacttccaaagctaaagatctagccaca
ctgaggaaagagcttggcgataaagaagtagtcttgaatgacattaagaataaggagatt
caaataagaaaaatagcaaagaaatacaagactcagtttgaggaacttgcgaaaacagtg
gaggaagagaaaaatcgatccgaagagtctcgaatagcggctggaacttcaggcagcgag
gattctgcttacgtgtcccaggaacgcgaggatcaattgcgagaagaaggccgagcagag
ttgcgtcaagtaaacattgacttaacatcaaaagttgacgagttgtctcgacaaatggta
gttgtacaaaacgaagctgatttgttgaagaaagaaatcgacactatgaacaagacaagc
gtagagaaggaagaacgcgcgaaacaagtgttgaaaggcgcaagaaccaaaatcatgcaa
ttgacggaatcaaagaagatttgcgaaaaagaattgcttgatctaaaagcaaaagtcgaa
gccggtgatactgaatcggacgcggccgaacacgatgccagactggtagctcttaaatct
caaatggaaggtagaatttcccgcctggaacatgagaaatcagaaattcaagcagagaaa
gatagtctttcgcaaagagttaatcagttacagcgacaattagctggcgttagcggagtt
agcgctaccacggaaccaccaacagcaaatattaaaccaatgtccgctcgtgctgaaacc
ccgttagcaagtattcgtcccatgagcgtagtagtgcaatctagaacagctgcagttcta
cctacgactgccagtgcaccggtaatggttgcaccccatcaacaacaacaatcacagcaa
caagtagtacacaccaccgaaacaagttctccaactagtagtcttccagattttcaacca
gctagtactagcagctcgtcgcagacagcgcctagtactttacgccaacttgttgtgcaa
ccacagttgagcgaatcagcagagtcgacgcaaagagaagatccagaaattgcggaaacg
ctgaatgtacagcaacagcaatgccaacaacagcagcagcaacaacaacaacaacaaact
gttgccttggtcagtccaagagtcgaacaacagcagcaacaacaggctgtagcgagcgat
caacagcaaactgtagccagtagttcaacccagtcggtgagcacgtcgcaagcttcgacg
gggcacaaacgtcccaggactctcgattccacggcatcaggatcaggaatcgtagagagc
gcagatcatagcaggcaagaacaagtccttagccctaaaactaaacggaccagacaagaa
atagcatccactgcgagtgctagtgcttcggaagtagaatatcaggtaccaacgtcgagt
caacgggatcaagatgaagaggtagaagaagggtgtgtagttgtagtggattgtgacgaa
ggtgaaggaggtggcaaccatcaaacgcaggaagaagaagaattcgataatgatccgtac
gaagaaatggaagaagaagaggaaatgccttatgaggtcgaggtagaagtagaacgagat
aacaacgaagttgagattataatgggagaagattcgacgagtgttgaagtacctagacaa
gcacaagcaacggtacccacgaatcaacagcagcaacagtctgaagcgattagtagcgct
ggaccaacgggagaaccgcccacatcgtttgcgactcgttcgtcgcggggtattgcaccc
atgcctaggcaacaacaacaacaacaccttcttctgccacagcaaggatacgaggatgga
ggtgacgatagtatagtaccaagcacgccgactttgtttgttccacgtcgaggggatggg
ttcggggaagctgtgagttcacctcaggtccctcaaggacgtttcacctttggagattca
tctgcaccgacgacagcatcgtcaaccccttctttatcaactccttctggatcaacaact
cgaacgatatttggatcatccagttctggagctgcacaagtggtacaagaaagtatggat
gatacgagaatggatcttgctcagtcagaagatggtggtactggtcgtagcgtgcctact
acgcctttgcaagtttcaccagcagccgatttaccaccttcgacaagcagcggaccatcc
gaagaacaggaaacaccagtttcagtgacaccagtgtctgtaacaggtaccactgttgac
gatactagcgaagaacctgcaatacctagtatttgtgtagtcggtgtcgatgatcaacaa
catagtcaaactgaaataatcacagaatctatcagtacgacaccgactgaaggaactagc
tcagagagtgaaaagcgtacagaagaagccggtcctctgatttccggagacgatgatgcg
gttgacaccggtgaaggaaccgaagaaccaggaagtgacatagtagaggatgaagtagaa
gaagagagtcgcgaagcggaagcgtctccttccagtaatacgcgtcaaagggcaatggca
gctgcggctgctgctgctgcggctgcaacagcagcaaatggtactagaagtgctacggca
cgacgatcgtcgcgatcgccgtttagggcaacgcgcggtacacggccgacgcctattgtt
tgggaaagtcagtctggcaggggtcaagctgtagtgcgcggaggacatggagggagggga
tcaaacaatgaaacaggaagggggcgtggaactagacgccgaatgcgctctaaatttcca
tacgcgcgattttaa
DBGET
integrated database retrieval system