Cotesia glomerata: 123274967
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Entry
123274967 CDS
T07738
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1-like
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
cglo
Cotesia glomerata
Pathway
cglo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cglo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123274967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cglo03019
]
123274967
Enzymes [BR:
cglo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
123274967
Messenger RNA biogenesis [BR:
cglo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
123274967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
MMR_HSR1
CbiA
nSTAND3
AAA_14
ATPase_2
GTP_EFTU
AAA_16
AAA_35
Motif
Other DBs
NCBI-GeneID:
123274967
NCBI-ProteinID:
XP_044598733
LinkDB
All DBs
Position
LG1:complement(29306861..29308714)
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AA seq
414 aa
AA seq
DB search
MNEHKTSQVFNLDPESELRFEVNEKDEKVTLELKNGLAEVFGAELIKGKKYEFGFGHKIG
VFTWQGCTVEFTGKTVAFVEKKTPMALYLNCHAALERMREFAEKDNSTGPIVMIAGPQDV
GKSTLTKILLNYAARMSRRPTFVDLDVGQGQITIPGIIGALPIDKPSDVVDGFNTQGSVG
FHFGHKGPGFNMTLYNHLVSRIAEVCSDRMEANRKEKAGGIIINTCGWILKKGYRILTHI
AQAFEVDAIIVLDNEKLYNALVKDIPDFVKVILLPKSSGVVNRGTPYRRITRNLRIDEYY
YGTKRTLTPHSFDVKWSDVKIFSVGPLSNSQEVSKNKATKLIPVVPGPNLKKHILSISLA
DPNKDDIVQTNIAGFVCITNVDIAKQTMTILSPLPGPLPNNVLLLSSITYPDDK
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaacataaaacaagccaggtatttaatttggatccagagagtgaattacgcttt
gaggttaatgaaaaagatgaaaaagtaacattagagttaaaaaacgggttagcggaagta
tttggagcagagttgataaaaggaaaaaaatatgagtttggatttggacacaaaattgga
gtatttacatggcaaggatgcacagttgagtttacaggaaaaacagtcgcgtttgtagaa
aaaaaaacaccaatggctctttatttaaattgtcatgcagctctggaacgaatgcgagag
tttgctgagaaagataattccactggacccatagttatgattgctggaccccaagacgtt
ggtaagtcgactttgacgaaaattttgttgaattacgctgctagaatgagcaggagaccg
actttcgttgacctggatgttggtcaaggacaaataaccattccgggaataattggagcg
ctgccgattgataaaccatcggatgtagttgatggattcaacactcaaggatctgttggt
ttccactttggccacaaaggtcctggtttcaatatgacgctgtacaatcatttggtatca
agaatcgcagaagtttgttctgaccgtatggaggctaacagaaaagaaaaggcaggggga
ataattataaacacttgcgggtggatactaaaaaagggttaccgaatactaactcatatt
gcccaagcatttgaagtcgatgccattattgttttagataatgaaaaattgtacaatgcg
cttgtcaaagatattcctgactttgttaaagttattttattgcccaaaagcagtggggtt
gtgaatcgaggcactccttacagaagaattaccagaaatttacgtatcgatgagtattat
tacggcacaaagagaacactgacccctcatagctttgatgtaaaatggagcgacgtaaaa
atattcagtgtaggccctttatcaaattcacaagaagtatccaaaaataaagctaccaaa
ttaattcctgtggtaccgggacctaatttgaagaaacacatactttctatatcactagct
gatcctaataaagatgatattgtacaaacaaatatcgctggctttgtttgcataacaaat
gtggatattgcaaaacaaactatgaccattttgagtcctctacccggaccgttaccaaat
aacgttttactcctttctagtatcacttatcctgatgacaaataa
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