Cottoperca gobio: 115017161
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Entry
115017161 CDS
T07513
Symbol
grin1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
cgob
Cottoperca gobio
Pathway
cgob04020
Calcium signaling pathway
cgob04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
115017161 (grin1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115017161 (grin1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgob04040
]
115017161 (grin1)
Ion channels [BR:
cgob04040
]
Ligand-gated channels
Glutamate (ionotropic)
115017161 (grin1)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
115017161
NCBI-ProteinID:
XP_029301265
Ensembl:
ENSCGOG00000022538
UniProt:
A0A6J2QVL6
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All DBs
Position
12:complement(5501686..5534294)
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AA seq
968 aa
AA seq
DB search
MRLFLLAVLFSCSCARAGCEPKIVNIGAVLSQKRYEQVFKDAVTQANLVYGRDKFKLTAI
SVTHKPNAIQMALSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDLMREFNWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFSQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKAARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHIND
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLIQVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVT
IHQEPFVYVKPTQPDGTCHEEMTLNGVLIKKVICTGPNETIPGNLSGRPIVPQCCYGFCI
DLLIKLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTIN
NERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLL
DRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFA
MIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELS
TMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGI
GMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLV
AGGIAAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDSKEVSGSQAMAGTPSL
PSSSLETQDDRKSGRAEPDPKKKASFRSISTNLASSIKRRRSSKDTQYPPTDITGQLNLS
DPSVSTVV
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttctgctagcggtgctcttctcgtgctcctgcgcgcgggcaggatgcgag
ccgaagatcgtgaacatcggggccgtgctgagccagaagagatatgagcaggtcttcaaa
gatgctgtgacccaggccaaccttgtctacggcagggataaattcaagctgactgccatc
tctgtcacgcataaacccaatgccatccagatggctctctccgtgtgcgaggacctcatc
tccagtcaggtctacgctatcctggtgagtcaccctccccagtccaatgaccacctcact
ccaacgcctgtctcatacactgcgggcttctatcgcatccccgtggtagggctcaccacc
cgcatgtccatctactcagacaagagtatccacctgtcctttctgcggacagtccctccc
tactcccaccaggcgcatgtgtggttcgacctgatgcgcgagttcaactggaaccacatc
atcttgatagtgagcgacgaccacgaggggcgcgctgctcaaaagaggctcgagaccctg
ttggaggagagagaaacaaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacctaaggcagagaaagtcctccagttcagccaggagactaac
ttaactgccctgctgctggaggccaaagagctggaggcccgagtcatcatcctgtccgcc
agtgaggaggacgctgctgcagtgtacaaggctgcccgcttcctcaacatgacgggctcg
gggtacgtgtggctggtgggcgaacgggagatgtcgggtaaagccctgagcgaggcgcca
gacggtctgatcggcctccagctcatcaacgggaagaatgagtcagcgcatatcaatgat
gcggtggctgtggtggctcagtccatccaggagctctttgagaaggagaatatcacagaa
cccccgagaggatgtgtgggcaacaccaacatctggaaaacagggcctctctttaaacgg
gtgctgatgtcatctaaatacccagagggcctcacaggacgtgtggagttcaatgatgat
ggagacaggaagtacgcccattacagtatactcaactaccagaagagtcgactcattcaa
gttggcatatacaatggaacacaggtggtaatgaacaatcagcggaagatcatctggccc
ggaggagagactgagaaaccacagggcttccagatgtccactcgattaaagatagtgacg
atacaccaggagccatttgtgtatgtgaaacccactcaaccggatggaacatgccatgag
gaaatgacattaaatggagtcttaattaaaaaggttatctgcactgggcccaatgagacc
atcccaggtaacctatcaggacgcccaattgtaccccaatgttgttatggattctgtatc
gatcttctcatcaagttggctatgaccatgaacttcacctatgaggtgcatctggtggct
gatgggaaattcggaacacaagagcgggtgaacaacagtaacaagaaagagtggaatggc
atgatgggagagcttcttgggggcctggctgacatgattgtagccccgctgactataaac
aacgaacgagcccagtacatcgaattctccaaaccctttaaatatcaaggtctcaccatc
ctcgttaaaaaggaaatccctcgcagtacactggattcgttcatgcagccgttccaaagc
acgctgtggctgctggtgggtctttcggtacatgtggtggcggtgatgctttacctacta
gaccggttcagcccgtttggaagatttaaagtaaacagtgaagaagaagaagaagatgcc
ctcaccttatcatctgctatgtggttctcctggggagtgttgctgaattctggaatagga
gaaggtgcaccacgcagcttctcagcgagaatcctgggtatggtgtgggccggatttgcc
atgatcattgtggcttcttatactgccaacctggctgccttccttgtgttggaccggcct
gaggagcgcatcactggcatcaatgacccaaggctgagaaatccatcggacaagttcatc
tacgccacggtgaagcagagctccgtggacatctacttccggcggcaggtggagcttagc
accatgtaccgccacatggagaagcacaactatgagagtgccgccgaggctatccaggcc
gtgcgtgacaacaagctgcatgctttcatctgggactctgcggtgctggagtttgaagcc
tcgcagaagtgcgacctggtgaccacgggagagctgtttttccgttcgggctttggcata
ggcatgcgcaaggacagcccctggaaacagaatgtgtccctggctattctcagttctcat
gagaatggcttcatggaagacctagataaaacctgggtgagataccaggagtgtgactcg
cggagcaatgccccagccacactcacctttgaaaacatggcaggggtcttcatgctggtg
gccggtgggattgcagcaggtatcttcctaatcttcattgaaatcgcctataagcgccat
aaagacgcccgcaggaagcagatgcagctggcctttgcggcggtcaatgtttggaggaag
aacctgcaggacagtaaggaggtctctggaagtcaagccatggccgggaccccctcatta
ccctcttcctctctagagactcaggatgataggaaaagtggtagagcagagccagacccc
aaaaagaaagcctcttttaggtccatcagtaccaacctggcctccagcatcaagagacgt
aggtcctccaaagacacgcagtacccacctactgacattacgggccagctcaacttgtct
gacccgtctgtcagcaccgtggtgtaa
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