Cottoperca gobio: 115020168
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Entry
115020168 CDS
T07513
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
cgob
Cottoperca gobio
Pathway
cgob03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115020168 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgob03021
]
115020168 (polr1b)
Enzymes [BR:
cgob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115020168 (polr1b)
Transcription machinery [BR:
cgob03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
115020168 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
DUF1186
Birna_RdRp_palm
Motif
Other DBs
NCBI-GeneID:
115020168
NCBI-ProteinID:
XP_029305968
Ensembl:
ENSCGOG00000006699
UniProt:
A0A6J2R5D2
LinkDB
All DBs
Position
15:4228450..4239040
Genome browser
AA seq
1134 aa
AA seq
DB search
MDSSAKWNNLPKGPSLKNLTERGFGVLNESQHAAVQDLTKAHIESFDQALTDGLSRVVQA
IPPLEFTFKNERISLAFVEATLYNPVVAKGSICREIKVFPAECRGRKCTYKGKMVADVSW
SINGVPKGIIKQSMGQVPLMVKSKLCNLHGMSPKELVKHHEEAEEMGGYFIVNGNEKVIR
MLIMPRRNYPIAMSRPKWKSRGQGYTQYGISMRCVKEEHTAVNMNLHYLENGTVMLNFIY
HKELFFLPLGFALKALVDFTDFQIYQELIKSLEGNSFYKSCASEMLRMVMEEGCITRNKV
LNYIGERFRVKMSLPEWYTNEQCAIFLLDECICIHLRSNMEKFYLLCLVTRKLFTFAKQE
CMEENPDSIMCQEVLTPGQLYLMFMKERMSDWLQSVKLSFEKRGSRLSGGLSAENVMKIF
NMGTDLTKPFEYLLATGNLSSRTGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTAICEIVAATLPTTPLPALLCSLGVT
PVDGSSGQAFADCYPVLLDGAVVGWVETELAPVVVDSLRRFKVLKEKKIPSWTEIVLVPK
TGKASLYPGLFLFTTPCRMVRPVHNLALGKQELIGTFEQIYINVGIMEDEIEPGVTTHQE
LFPHSMLSVVASFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFMDRSDNKLYRLHTPQSP
MVRPYMYDHYNLDNYPSGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTELVD
LADKVRGDDSVVFGTKPGDPKVNEKLDTDGLPYIGSTLQHGDPFYSYINLNSGQSFVNFY
KSQEACVVDNIKICSNDTGTGRFKRVCITVRVPRNPTIGDKFASRHGQKGILSRLWPAED
MPFTESGMAPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLSHDATPFTFSEESSALEY
FGKMLRAGGYNFYGTERLYSGVSGQELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPVGGRNIQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCVDCGSLLSPML
EKPPPYWSAMRHRKTVCTLCGKSESIDSVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggactcttcagcaaagtggaataatttgcccaaaggtccgagtctaaagaatctgaca
gagagagggtttggcgtcctgaacgagagtcaacacgctgctgttcaggacttgacaaag
gctcacatcgagtcgtttgaccaggctctcactgacggactcagccgcgttgtgcaggcc
atccctcccttggagttcacattcaaaaatgaaaggatcagccttgcgtttgttgaagcc
accctttacaacccggtagtcgccaaagggagcatctgcagggaaattaaggtctttcca
gcagagtgcagggggagaaaatgtacatacaagggaaagatggtggcagacgtcagctgg
tcaatcaacggagttcctaaaggcatcatcaaacagtccatgggtcaggtgccactcatg
gtgaagtccaagctgtgtaacctgcatggcatgtctcccaaagagcttgtcaaacaccat
gaagaagcagaggaaatgggaggttatttcattgtaaatggaaatgagaaggttatccgt
atgctgatcatgccaaggaggaactatcctattgccatgtcaagacctaagtggaagagc
aggggacagggatacactcagtatggtatttccatgcgttgcgtgaaggaggagcacaca
gccgtcaacatgaacctacattatctggaaaacgggactgtgatgctgaacttcatctac
cacaaagagctcttcttcctcccactagggtttgcacttaaggcactggtggacttcaca
gacttccagatctaccaggagctgatcaagagccttgagggtaattcattctataagagc
tgtgcatccgagatgctgcgcatggtcatggaggaggggtgcatcacccgcaacaaggtg
cttaattacattggagagcgcttcagggttaagatgagccttcctgagtggtacacaaac
gagcagtgtgccatcttcctgctggatgagtgcatctgtatccacctgaggtccaacatg
gagaagttctacctgctgtgtctggtgaccaggaagcttttcacatttgccaagcaggag
tgcatggaggaaaaccctgacagcatcatgtgtcaggaagtgctcactcctggtcagctc
tacctcatgtttatgaaggagagaatgtctgactggttgcagtctgtgaagctgtcattt
gaaaagcgaggcagccgactgagcggaggattgagcgctgaaaacgtgatgaagatattc
aacatgggcactgacctgaccaaaccctttgaatatctgctggccactgggaacctcagc
tccaggacaggtctcggcatgctgcagaacacaggcctgtgcgttgtagccgacaagctc
aacttcatccgctacctgtcccacttccgctgtgtgcacagaggagcagcgttcgccaag
atgaggacaacttctgttcgtaagctgctgcccgagtcctggggcttcttgtgtcccgtc
cacactcccgatggagagccttgtggactcatgaaccacatgacagccatctgtgagatt
gtggcagcaaccttgcccaccacacccctgcccgctctgctctgttcccttggagttact
ccagtggatgggtcatctggacaagcatttgcagactgctaccctgtgctcctggatgga
gctgttgtaggctgggtagagaccgaattagcccctgtagtggtcgactccctacgcagg
ttcaaggtgctgaaagagaagaaaatcccttcctggactgagattgttctggttccaaaa
acaggcaaggccagcttgtaccctggcctgttcctcttcacaacaccctgccgtatggtg
cggcccgtacacaacttggctctgggcaagcaggagttgattggcacatttgaacaaatt
tacatcaatgtgggcatcatggaggatgagattgagccaggagtgaccacacaccaggaa
ctcttccctcacagtatgctcagcgtggtggctagcttcatcccctactcggaccacaac
cagagtcctaggaacatgtaccagtgtcagatgggtaagcagactatgggtttcccgctg
cactcgttcatggatcgttcagataacaagctgtaccggctccacaccccacagagccca
atggtcaggccctacatgtacgaccactacaacctggacaactacccaagtggcacaaac
gccatcgtggccgtcatatcctacacaggctacgacatggaagacgccatgattgtgaac
aagtcgtcatgggagagaggctttgcccatggaagtatctacaagactgagctggtggac
ctggcagacaaagtaaggggagatgacagcgttgtgtttgggaccaagccaggtgaccct
aaagtcaatgagaaactggacactgacggactaccatacattggatcaacacttcagcat
ggagaccccttctacagctacatcaacctcaacagtggccagagcttcgttaacttctac
aagagccaagaggcctgtgttgtagacaatataaagatctgcagcaacgacaccggcaca
ggccgttttaaacgtgtttgtatcaccgtacgagtgccacgaaacccaacaattggtgac
aagtttgccagtcgccacggtcagaagggcatcctgagccgcctgtggccggccgaggac
atgcccttcaccgagagcggcatggctcccgacatcttgttcaacccccacggcttcccc
tcccgcatgaccatcgggatgctgatagagagcatggccggaaagtccggtgccctgcac
ggcctgagccacgacgccacacccttcaccttctcagaggagagctctgcactcgagtac
tttgggaaaatgctccgggcaggtggatacaacttctacggcacggagaggctctacagt
ggagtgagcggtcaggagctcgaggccgacatcttcatcggagtcgtctactaccagcgg
ctgcggcacatggtctccgacaagttccaggtgaggaccacaggagcacgagacaaggtg
accaaccagccagtgggagggaggaacatccagggaggcatccgtttcggggagatggag
cgagacgccctgctcgcccacggctcgtcattccttcttcacgatcgcctcttcaactgc
tcggaccgatcggtggctcaggtgtgtgtcgactgtggcagcctgctctcccctatgtta
gaaaaacccccaccctactggtcggccatgcgccaccgcaagactgtctgcactctgtgt
ggaaaaagtgaatccattgactctgtgtctgttccttatgtattccgctactttgtagct
gagctcgcagcaatgaacatcaaagtcaaattagatgttaagtga
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integrated database retrieval system
