Cottoperca gobio: 115020424
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Entry
115020424 CDS
T07513
Symbol
ggps1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X1
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
cgob
Cottoperca gobio
Pathway
cgob00900
Terpenoid backbone biosynthesis
cgob01100
Metabolic pathways
Module
cgob_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
115020424 (ggps1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cgob01006
]
115020424 (ggps1)
Enzymes [BR:
cgob01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
115020424 (ggps1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
115020424 (ggps1)
2.5.1.29 geranylgeranyl diphosphate synthase
115020424 (ggps1)
Prenyltransferases [BR:
cgob01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
115020424 (ggps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
115020424
NCBI-ProteinID:
XP_029306314
Ensembl:
ENSCGOG00000013244
UniProt:
A0A6J2R7S1
LinkDB
All DBs
Position
15:complement(8781191..8793585)
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AA seq
346 aa
AA seq
DB search
MCEALMLQPPPTLRLLCTDAEAYIDLCELEAMDCDSAATSERILLEPYKYLLQLPGKQVR
TKLSQAFNHWLNVPEDKLQGIIEVTEMLHNASLLIDDIEDGSKLRRGFPVAHSIYGIPSV
INSANYVYFLGLEKVLTLEHPEAVQVFTRQLLELHRGQGLDIHWRDTYTCPTEQEYRNMV
LQKTGGLFGLAVGLMQLFSDFKQDLKPLLDALGLFFQIRDDYANLSSREYTENKSFCEDL
TEGKFSFPTIHAIWSRPESTQVQNILRQRTENMDIKRYCVDYLEKVGSFAYTRQTLRVLE
AEVYRLIGEFGGNPQLESLVKHLSKMHRDAEASAESSTEPHSSQNY
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaggcactcatgttacagcccccacctactctgcgcctgctctgtaccgacgcc
gaagcatatatagatctgtgtgaacttgaagcaatggattgtgactcggcagccacctct
gagcgaattctgctagaaccatacaagtacttgttgcaactaccaggaaagcaggtgagg
acaaaactgtcccaagcattcaaccactggctcaatgttccagaggacaaactgcagggg
atcatcgaggtgactgagatgctgcacaacgccagcctgctcatagacgacatcgaggac
ggctccaagctgcggcgaggcttccccgtggcccacagcatctacggcatcccctccgtc
atcaactcggccaactacgtctacttcttggggttggagaaggtgctgaccctggagcac
cccgaggctgtccaagtgtttacccggcagctgttggagctgcaccgcggtcagggtctg
gacatccactggagggacacctacacctgtcccactgagcaggagtaccgcaacatggtg
ctgcagaaaactggagggctttttggtttggctgtgggcttgatgcagctcttctcagat
tttaaacaggacctgaaacccctcctggacgcactgggtctcttcttccagatccgcgac
gactacgccaacctgagctcacgcgagtacactgagaacaagagcttctgcgaggacttg
accgagggcaagttctctttccccaccattcatgccatatggtcgcgtccagagagcacc
caggtgcagaacatccttaggcagcgcacagagaacatggacatcaaacgatattgtgtg
gattacctggagaaggtgggctcctttgcttacactcgtcagactctgcgggtactggag
gccgaggtctaccgcctcatcggggagtttggggggaaccctcaactggaaagccttgtc
aaacacctcagcaaaatgcaccgtgatgctgaagcctcagcagagtccagtactgagcca
cactccagccagaactactga
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integrated database retrieval system