Cottoperca gobio: 115020858
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Entry
115020858 CDS
T07513
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgob03016
]
115020858 (cdkal1)
Enzymes [BR:
cgob01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
115020858 (cdkal1)
Transfer RNA biogenesis [BR:
cgob03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
115020858 (cdkal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
TRAM
Motif
Other DBs
NCBI-GeneID:
115020858
NCBI-ProteinID:
XP_029306738
Ensembl:
ENSCGOG00000017807
UniProt:
A0A6J2R7K1
LinkDB
All DBs
Position
16:15263400..15491122
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AA seq
566 aa
AA seq
DB search
MPSACDSLIEDIEDMVSSSDPTPHERQFARKSIMPRSRKKNEPLSHEELQADSLIPGTQK
IWIKTWGCSHNNSDGEYMAGQLAASGYKMTDDPTDADLWVLNSCTVKNPAEDHFRNSIKK
AQELQKKVVVAGCVSQAQPRMDYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKDG
GRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERARQS
FQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWRLVEEIPEGAMLRLGMTNPPYILEHLQEM
AMILNHPRVYGFLHVPVQSASDSVLMDMKREYCIDDFKKVVDFLKERVPGVTIATDLICG
FPGETEEDFQETVDLVKLYRFPSLFINQFYPRPGTPAAKMEQVPAHMKKQRTKELSQLFH
SYNPYDHKVGERQHVLVTEESFDAQYYVSHNKFYEQVLVPKRAEFKGKMIEVDIYEAGKH
FLKGRPVEDSKPFTPSIASPLQKGEVSGLVQEPMANGIHGPASSMPSSSVLLIGSYSLDR
EALKKLGIGLTLAAAILAFIVEKLYT
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccgcctgtgactctctgattgaagacattgaggacatggtgtcctctagcgac
cccacccctcatgagagacagtttgctagaaagagcatcatgccgaggtccaggaagaaa
aacgagcctctgagccacgaggagctacaagctgacagtttaattcctggcacccaaaaa
atctggataaaaacgtggggctgcagtcataacaactcagatggagagtacatggccgga
cagctagctgccagcggatacaagatgactgatgacccaacagacgcagacctatgggtg
ctcaacagctgtactgtgaaaaaccctgcagaggatcacttcagaaactcaatcaaaaaa
gcccaggaactgcagaaaaaagttgtagtagcaggttgtgtttctcaggctcagccacga
atggactacctcaaaggactcagcatcattggggtccaacagattgatcgagtggtggaa
gtagtggacgaggctgttaaaggccactcagttcgtctgttgggtcagaagaaagatgga
ggccggaggctcggaggcgctagactggacctgcccaagatcaggaagaaccctctcatt
gaaatcatctccattaacactgggtgtctgaacgcatgtacctactgtaagactaagcat
gccagaggagacctggctagctatcccatcgaggagctagtggaaagagccaggcagtca
tttcaggagggagtgtgtgagatctggttgaccagtgaagacacaggagcttatggtaga
gacattgggacagacctgcccacattgctgtggagattggtggaggagattcctgaagga
gccatgctgaggctgggtatgaccaacccaccttatatcctggaacacctacaggagatg
gctatgatattgaatcatccacgcgtctatggcttccttcatgttcctgtgcagtcggcc
tcagacagtgtcctgatggacatgaagagagagtattgcattgatgacttcaaaaaagtg
gtggacttcctcaaagagagggtcccaggtgtaactattgctacagatttaatctgcggt
tttcctggtgagacggaggaagacttccaagagacggtagacttggtgaaactctaccga
ttccccagtctcttcatcaatcagttttaccccaggcccggtacacctgccgccaagatg
gagcaagtaccagcgcatatgaagaagcagaggactaaagagctgtctcaattgttccac
tcttacaacccctatgaccacaaggtcggagagaggcagcatgtgttggtgactgaggag
tcatttgatgcccaatactatgtgtctcacaacaagttctacgaacaggtgctggtgcct
aagagggctgagttcaaagggaagatgatcgaggtggacatctacgaggcaggaaaacac
ttcttgaaaggcagaccagtagaagacagtaagcccttcactccctccattgcctcaccg
cttcagaaaggagaggtgtctggcctcgtgcaggaaccgatggccaacggcatccatggt
cctgcttcttcgatgccttcttcatctgttttgttgatcggctcttacagtctggacagg
gaagcactgaagaagctgggaatcggacttactctggcagcagccatcttggccttcatc
gtagagaaattgtacacatag
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