Cottoperca gobio: 115024977
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Entry
115024977 CDS
T07513
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
cgob
Cottoperca gobio
Pathway
cgob03020
RNA polymerase
cgob04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115024977 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
115024977 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgob03021
]
115024977 (polr3a)
Enzymes [BR:
cgob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115024977 (polr3a)
Transcription machinery [BR:
cgob03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
115024977 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF3654
Motif
Other DBs
NCBI-GeneID:
115024977
NCBI-ProteinID:
XP_029312763
Ensembl:
ENSCGOG00000021643
UniProt:
A0A6J2RPB9
LinkDB
All DBs
Position
19:complement(11428651..11447400)
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRKQAHIQVVSKNLYSQDTKHTPLPYGVLDHRM
GTSEKDRPCLTCGKNLADCLGHYGYLDLELPCFHVGYFKAIIGILQMICKTCSSIMLTKE
DRLIFMDFLKRPNLAYLQKRGLKKKISDKCRKKSICLNCAAFNGPVKKCGLLKIIHEKYK
TNKKVVDVFVSDFLQSFDTAIEHNKVVEPLLTRAQENLNPLVVLNMFKRIPQEDIPLLLM
NPEAGKPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVIKANLELLRKLVRNGPEVHPGANF
IQNRHTQMKRFLKYGNREKIAQELRFGDVVERHMIDGDIVLFNRQPSLHKLSIMAHIAKV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALILMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRSKTCQIVASILVDKDEKIRITLPRPAIMKPMCLWTGKQI
FSLILKPNKECPVKANLRTRGKQYCGKGEDLCHNDSFVVIHNSELMCGSLDKGTLGSGSK
NNIFYILLRDWGQLEAANAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKQDLLDDG
YKKCDEYIEALATGKLQQQPGCTAEETLEALILRELSVIRDRAGAACLRELDKSNSPLVM
AVCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPADMEGKDEPLEFQRVLDNIRAIFACPDEPALSQNELVLTADVIMKRVDFLC
CKDIFLEEIKKFIKKLSERIKKTRDKYGINDNCTSEPKVLYQLDRITPTQLEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNI
STPIITAHLDVENDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENNKSSMYYVLQSLKEDLPKVV
VQGIPEVSRAVIHIDEQSTKTMYKLLVEGDNLRAVMATHGVNGSKSTSNNTSEVEKTLGI
EAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADKDHAPVKRPLLFD
TADFHIPLVT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagtttagagagacggatgtggccaagaaaataagccacatctgcttt
gggatgaaatctgccgagcagatgcgtaagcaggcccacatccaggtggtcagtaagaat
ctgtacagccaagacaccaaacacacaccactaccctatggggtgttggaccaccgtatg
ggcaccagtgagaaagaccgaccatgtttgacatgtgggaaaaatctggcagattgcttg
ggacattatggctacttggatctggagctgccatgttttcatgttggctatttcaaagcc
atcataggaatcctacagatgatctgcaagacatgctcgagcataatgctgaccaaagag
gacagactgattttcatggatttcctgaaaagaccaaacctggcctatcttcagaaacga
gggttgaagaagaagatttctgataaatgtcgcaaaaagagcatctgtctgaactgtgcc
gctttcaatgggccagttaaaaagtgtggcctgcttaagatcatccatgagaagtataaa
acgaacaagaaggtggtggatgtttttgtgtcagatttcctgcagtccttcgatactgcc
atcgagcacaacaaagtggtggaacctctgctgaccagagcacaggaaaacctgaaccca
ctggtggttctgaacatgtttaagagaattccccaagaagacatccccctgctgctgatg
aacccggaggcagggaaacctgcagacctcattctcacccgcctcctggtgcctcccctc
tgcatacgaccctctgtggtcagcgacctgaagtcgggcaccaacgaggacgacctcacc
atgaagctcacggagataatcttcctcaacgatgtcatcaaaaagcatcgtatgacgggg
gcaaagacccagatgatcatggaggactgggacttcctccagctgcagtgtgctctttac
atcaacagtgagctttctggcatccccctcaacatggcacctaagaaatggaccagaggc
tttgtgcagagactcaaggggaagcaaggtcgattcagaggaaacctctcaggaaaaaga
gtggacttctctggcagaactgtcatttctcctgacccaaacctaaggattgatgaggtg
gccgtccccgtgcatgtggccaaaatcctgacgtacccagagaaggtgatcaaagctaat
ctggagctactgaggaaactggtccgcaacggtcctgaggttcatcccggagccaacttt
atccagaatcgtcacacacagatgaaaaggtttttaaagtatggaaaccgtgagaagata
gcgcaggagctgaggtttggtgacgtggtagaaaggcacatgatagacggcgacatcgtg
ctcttcaatcgacaaccttccctgcacaaactcagcatcatggcccacatcgccaaagtc
aaacctcacaggacgtttcggttcaacgagtgtgtgtgcaccccgtacaacgctgacttt
gacggtgatgaaatgaaccttcatctacctcagactgaagaagccaaagccgaggccctc
atcctgatggggacaaaagctaatcttgtcactccaagaaatggcgaacctctgatcgct
gctattcaggactttctgacaggggcctaccttctgacgctaaaggacaccttctttgac
agatcaaaaacctgtcagatagtggcatccatcctcgtggacaaagatgaaaaaataaga
atcactctgccccgcccggctatcatgaagcccatgtgtctgtggacgggcaagcagatc
ttcagcctcattctcaaaccaaataaggaatgtccagtcaaggcaaacctgcggaccagg
ggcaaacagtactgtggcaagggagaggatctctgtcacaacgactcattcgtggtgatt
cacaacagtgagctgatgtgcggtagcctggataaaggtaccttggggtccggctctaag
aacaacatcttctacatcctgctgagagactggggacagctggaggctgctaacgccatg
tcccgcctggcaagactcgcgccggtatatctctccaaccgcggcttttctattggcatt
ggtgatgtgacacctggccagggtctgctgaaggccaagcaggacctgctggatgacggc
tacaaaaagtgtgacgaatacatcgaagcgctcgccacgggcaagttgcagcagcagccc
ggctgcacggcagaggagactctggaggctctcattttgagagagctgtccgtcatcaga
gacagagctggcgctgcctgcctcagggagctcgacaagagcaacagccctcttgtcatg
gctgtttgcggctccaaaggatccttcattaatatctctcagatgattgcctgtgtgggt
cagcaggccataagtggctctcgagtacctgatggatttgagaatcgctccctgcctcac
tttgaaaagcactcaaaacttcctgctgctaaaggctttgtggccgacagcttttattct
ggcctgacacccactgagtttttcttccacacaatggctggccgagagggtctggtggac
actgctgtgaaaacggcagagactggatatatgcagaggcgtctggttaagtccctggaa
gatttgtgctcgcagtacgacctgacggtacgcagctccaccggtgacatcatccagttt
atttatggcggcgatggtcttgacccagctgacatggagggaaaggatgaaccgctggag
tttcagagagtcctagacaacatccgggcgatctttgcgtgtccagacgagcctgcactc
agtcaaaacgaactggtccttaccgctgacgtcatcatgaagagagttgacttcttgtgc
tgcaaagacatcttcttggaggagataaagaaattcattaagaagctctcagaaaggatc
aagaagaccagagacaagtacggaatcaacgacaattgcaccagcgagccaaaagtgctc
tatcaactggaccgcataacccccacccagctggagaagttccttgaaacctgcagagac
aaatacatgagagcgcagatggagcccggctcagctgtaggagccctgtgtgcccagagc
atcggagagcctgggactcagatgaccctgaagaccttccactttgctggtgtagcgtcc
atgaacatcactctgggggtgcctcgcattaaagagatcatcaatgcctccaagaacatc
agcactcctataatcacggctcatttggatgtggaaaacgacgccgactttgccaggctg
gtgaagggaaggatcgagaaaactcttctaggcgagatctctgagtacatagaagaggtt
tttctgccagatgattgtttcattctggtcaaattgtccctggagagaataagactgctg
cgactggaggtaaatgcggaaacggtgcgttactctatctgcatgtcgaaactccgagtg
aaaccaggagacatagccgtgcacggcgaggcggtggtgtgcgtgtctccacgagagaac
aacaaaagctccatgtactacgtgctgcagtcattaaaagaggatcttcccaaggtggtg
gttcaaggaatacctgaagtttcccgagccgtcattcacattgacgaacagagcaccaag
accatgtacaaactcctggtggagggggacaacctgagggctgtcatggcaacgcacggc
gtgaatggaagcaagtccacttcgaacaacacgtctgaggttgagaagactttgggtatt
gaggcggcgagatccaccatcatcaacgagattcagtacaccatggtgaaccacggaatg
agcatcgaccggcgtcacgtcatgcttctagcagatctcatgtcctacaagggggagata
ctgggaatcaccaggttcggtttagccaaaatgaaggagagtgtcctcatgctggcctcc
ttcgagaaaacagctgatcatctcttcgacgcagcctacttcggacagaaggactccgtc
tgcggtgtgtccgagtgcatcatcatggggattccaatgaatatcggaacaggactgttt
aaactcctacacaaggccgacaaggatcacgctccagtcaaaaggcctctcctcttcgac
accgccgacttccatatacctctggtcacatag
DBGET
integrated database retrieval system
