Clupea harengus (Atlantic herring): 105890154
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Entry
105890154 CDS
T09045
Symbol
plcd1a
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1a isoform X2
KO
K05857
phosphatidylinositol phospholipase C, delta [EC:
3.1.4.11
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00562
Inositol phosphate metabolism
char01100
Metabolic pathways
char04020
Calcium signaling pathway
char04070
Phosphatidylinositol signaling system
Module
char_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
105890154 (plcd1a)
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
105890154 (plcd1a)
04070 Phosphatidylinositol signaling system
105890154 (plcd1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105890154 (plcd1a)
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
105890154 (plcd1a)
Membrane trafficking [BR:
char04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
105890154 (plcd1a)
Endocytosis
Macropinocytosis
Phospholipase C
105890154 (plcd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PI-PLC-Y
EF-hand_like
EF-hand_10
C2
PH
PH_12
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
105890154
NCBI-ProteinID:
XP_012671580
Ensembl:
ENSCHAG00000005449
UniProt:
A0A6P3VHM1
LinkDB
All DBs
Position
17:2520211..2541575
Genome browser
AA seq
750 aa
AA seq
DB search
MELNGTAGKHGLEGDADLEFLLLGGELQKVRSNSWKKNRFYKLQEDCKTMWHESHKYLKS
TQTFSIDDIEAVRLGRQSEGLQKYTDPSLEESCFSIIFKGRRKNLDLTASSVEEAKRWVT
GLEKVITNMRGLNRQKTSEHWIFNCMRKADKNKDNKMTLKELKHFLHQINIEVDDTYAAV
LFAKCDKSNSGSLEGSEIKHFYDLLTHREEIDVIYAKYAQTEGQMSAANLLNFLLNEQRE
TVSMEHAVKLIEKYELDDTAKQKKQMTKDGFLMYLHQEEGLIFNPAHKEVYQDMTQPINH
YFISSSHNTYLMEDQLKGPSSTEAYIRALMKSCRCVELDCWDGPNGEPIIYHGYTLTSKI
LFKDIIKAIKEYAFKTSEYPVIISLENHCTVEQQKLMAQHMTSVLGEALLTQPLGDQMPS
NFPSPEELKGYFLIKGKRLNKLDAAFNNNSVEEDESVSEEDEAAEENIQKPKEKKSKIKL
AKELSDLVIYCKSVHFGGFEHARDDQAFYEMSSFKEGKAVNLADTSATAYIHHNMDKLSR
IYPAGSRTDSSNYNPVPLWNAGCQIVALNFQTPSKEMDLNQGRFLPNGLSGYVLKPEFQR
DPASQFDPNSLQKGAGYRKKTLHLMVISAQQLPKLNKDKCKSIVDPLVRVEICGVPADAA
SKETQSIENNGFNPMWNESFQFDVHVPELAMLRFLVEDYDTTSQNDMIGQYCLPFTSLQN
GYRHVPLLTKRGDVISSAGLFVHIMVVDAE
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggaactaaatggcactgctggtaaacacgggttagagggcgatgcagacctggagttc
ctgctgttgggtggagagctgcagaaagtgcggtcgaactcttggaagaagaaccgcttc
tacaagctgcaggaggactgcaagaccatgtggcatgagtcccacaagtacctcaaaagt
actcagaccttctccattgatgacattgaggcggtgcgtcttggccggcagtcggagggg
cttcagaagtacactgaccccagcctggaggagagctgtttctccatcatcttcaagggt
cggcgcaagaacctggacctcacggccagctccgtcgaagaggccaagcgctgggtgacc
ggcctggagaaagtcatcaccaacatgcgtggcctcaaccgacaaaagaccagcgaacac
tggatcttcaactgcatgcgcaaggcggacaagaacaaagacaacaagatgaccctgaaa
gagctcaagcacttcctgcatcagataaacatcgaggtggatgacacgtatgctgcagtg
ctcttcgccaaatgtgacaagtccaactcgggctccctggagggctcagagatcaagcac
ttctacgacctgctgacgcaccgcgaggagatcgatgtgatctacgccaagtacgcgcag
accgagggccagatgagtgccgctaacctgctcaatttcctgctgaacgagcagagagag
accgtctccatggagcacgccgtcaagctcattgagaagtatgaactggatgacacagcc
aagcagaagaagcagatgaccaaggatggtttcctgatgtacctgcaccaggaggagggg
cttatcttcaaccccgcccacaaggaagtgtaccaggacatgacccagccaattaaccat
tacttcatctcctcctcccataacacctacctgatggaggaccaactcaaggggcccagc
agcacagaggcctacatcagagcactgatgaagagctgtcgctgcgtggagctggactgc
tgggacggacccaacggagagcccatcatctaccacggctacacgctcacgtccaagatc
ctcttcaaagacatcatcaaggccattaaagagtacgccttcaaaacctctgagtacccg
gtcatcatctccctggagaaccactgcacggtggagcaacagaagctcatggcccagcac
atgacctccgtcctgggggaggcactgctcacacagcccctgggggaccagatgccctca
aacttcccttcaccagaggagctgaaggggtactttctgatcaaaggcaagcggctgaat
aagctggacgcggccttcaacaacaacagtgttgaggaggatgagagtgtgtcggaggag
gacgaggcagcagaagagaacatccagaagcccaaagagaagaagtccaagattaagctg
gccaaggagctctcagacttggtcatctactgcaagagtgtgcacttcggtggctttgag
cacgctcgcgatgaccaggccttctacgagatgtcctccttcaaggagggcaaggctgtc
aacctggcagacacatcagccacagcctacattcaccacaacatggacaagctcagcaga
atctacccagccggctccaggacagactcctccaactacaaccccgtgcctctgtggaat
gctggctgccagatagtggccctgaacttccagacgccttctaaggagatggacctgaac
caggggcgtttcctccccaatggactgagcggctacgtcctcaagcccgagttccagagg
gacccggcctcccagtttgaccccaacagcctccagaaaggcgccgggtacaggaagaag
acgcttcacctcatggtgatctcagcacagcagctgcccaagctcaataaggacaagtgc
aagtccattgtggaccccctggtgagagtggagatctgtggtgtcccggctgacgccgca
agcaaagagacgcagtccattgagaataatggtttcaatcccatgtggaatgagagcttc
cagtttgacgtgcacgtcccagagctggctatgctgcgcttcctggtagaagactatgac
accacatcccagaatgacatgattggtcaatactgtctgcccttcaccagtctacagaac
ggttaccgtcacgttccgctgctcaccaagagaggtgacgtcatatcctccgccggactc
tttgtgcacatcatggttgtggacgcagaataa
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