Clupea harengus (Atlantic herring): 105890844
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Entry
105890844 CDS
T09045
Symbol
ret
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04010
MAPK signaling pathway
char04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105890844 (ret)
04020 Calcium signaling pathway
105890844 (ret)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
char01001
]
105890844 (ret)
Enzymes [BR:
char01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
105890844 (ret)
Protein kinases [BR:
char01001
]
Receptor tyrosine kinases (RTK)
RET family
105890844 (ret)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD3
Pkinase
RET_CLD1
RET_CLD4
Cadherin
RIO1
Pkinase_fungal
ABC1
Motif
Other DBs
NCBI-GeneID:
105890844
NCBI-ProteinID:
XP_031435062
Ensembl:
ENSCHAG00000005492
UniProt:
A0A6P8GHY2
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All DBs
Position
13:3805714..3831106
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AA seq
1113 aa
AA seq
DB search
METTRGIFWGEIVLVLLSVCKGASGLYFPQSDYSESIYIGQPAGSPVLQVFAMRDKDSER
PHFYLCWQNPSRAPHYASWFHMDEATGMISMNKTLEWDDFGSVYPSSMMSFKKLSLKAIF
AIGPVQRASCHLRNTVGINLIFINATAPPCDEITLEKLCFPDKEVTPHITENRMPGPLYQ
LRRLTRSHLCLNYTISYGVDADDPVPFEVNDTTSELLVTRPVDREEREMYRMQIVCKVET
GETINKLFLPMHVNIYDENDNPPYVNGTDTEDVVVEFNRMKGAVFGNLSVYDRDTTPIYP
KDHPQNKLTGTMITNDTWTKNMFIVDHSFREEKAIFGNVRGTIHEYKLILNKNLSILENR
SFQMDYLLKDLSYEGGDVNVMLHFNITILPVPIRFTNVSYVFTVSRKSTMFSKIGRVCVD
NCQKFQGIDVEYQLEIVDRNTSVDLQSCFSAVGIGRSLRDVSGMLYVNDTEVLRRAECQE
LQYVVVATEQQLQLQARTQLLVIFEDEYAQEEFVDQRMLSCAEKRKRGECEAFRGLGTPT
GRCQWRQSTDKGISQNYSTCSPDLRTCPDGFCDVVERKDTICPQDCTRNTIIGGHEAGLM
FGIKAGYGTCYCFSEKCFCEKDDIEEAMCDDVCKTIIATAVLLSFVVSILLSSYYIHRYH
KNTPKPPIASAEMTFRRPAQSYPISYSANNMRRGSLDSMENQVAIDNFKIPEDPKWEFPR
KNLVLGKTLGEGEFGKVVKATAFRLKGKAGYTTVAVKMLKENASHSELRDLMSEFTLLKQ
VNHPHVIKMYGACTQDGPLYLIVEYAKYGSLRNFLRESRKVGPSYMSNDGNRNSSYLENP
DERALTQGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYE
EDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIMTLGGNPYPGIAPERLF
NLLKTGYRMEKPENCSEEMYNLMLRCWKQESDKRSTFTEISKELEKMMVKSRDYLDLAAS
TPADALLYDDALSEEDTPLVDCNNAPLPRNLPSTWIENKLYGMSYPNWPERSPVQLNRLD
GTNPVFSRYANDSVYANWIALPTSAKIVDKLDS
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaacgcgtggcatattttggggagaaatcgtactggtactcctttccgtctgt
aaaggtgcttcaggcctgtacttcccgcagagtgattactccgagagcatttacatcggg
cagcctgctgggtcgcccgtgcttcaggtcttcgccatgcgggacaaggactccgagagg
ccccacttctacctgtgctggcagaacccttcaagagctccgcactacgcatcctggttc
cacatggatgaggccacaggaatgatcagcatgaataaaacactggagtgggacgacttc
ggctctgtgtatccaagctccatgatgtccttcaagaagctcagcctgaaggctatattc
gccattggaccagtgcagagagccagctgccacctccggaacacagtggggatcaacctc
atcttcatcaacgccacagcgcccccttgtgacgagatcacgctggagaagctctgtttc
cccgacaaggaagtgacccctcacatcacagagaaccgtatgcctgggccgctgtaccag
ctgaggaggctgaccagatcccacctgtgcctcaactacaccatcagctatggtgttgat
gcagacgatccagtgccattcgaggtgaacgacaccacctctgaactgctggtgacgagg
cctgtggaccgggaggagagggagatgtaccgcatgcagatcgtctgcaaagtggagacg
ggggagaccatcaacaaactgttcctccctatgcacgtgaacatctacgacgagaacgac
aacccgccatacgtcaacggcacagacaccgaggatgtggtggtggagttcaatcgaatg
aaaggggctgtttttggaaacttgtctgtttatgacagggacaccacaccaatctacccg
aaagatcaccctcagaacaagcttactggtaccatgatcacaaatgacacctggaccaaa
aacatgtttatcgtggaccactcattccgagaagaaaaggccatttttgggaatgtgcgg
ggcaccatccatgagtacaaactgatcctcaataagaacctgtccatcctggagaacaga
tcctttcaaatggactatctgttaaaggacttatcatacgaagggggggacgtgaacgtg
atgctgcacttcaacatcaccattctgcccgtgcccattcgcttcaccaacgtcagctat
gtgttcaccgtctcaagaaaatccactatgttctcaaagattggaagggtctgtgtggac
aactgccagaaatttcagggcattgacgtggaataccagctggagattgtcgacaggaac
acgtcagtagacttgcagtcctgcttctcagcggtgggcattggccgcagcctgagggac
gtttcagggatgttgtacgtgaacgacactgaggtgcttcgtcgggccgaatgccaagaa
cttcaatatgttgtggtcgcaacggagcagcagctgcaactgcaggccaggacccagctg
cttgtcatctttgaagatgaatatgctcaggaggagtttgtggaccagcgcatgttgtca
tgtgcggagaagaggaaacgaggggaatgtgaagcattccggggactgggaacgccaaca
gggagatgccagtggagacaaagcacagataaaggcatatcgcagaattactccacctgc
tctccagacctgcgaacctgccctgatggtttctgtgatgtagtggaaagaaaagataca
atatgtcctcaggactgcacaaggaacactattattgggggacacgaggcaggcctgatg
tttggaatcaaagctggctatggaacctgctactgcttctcagagaaatgcttctgtgaa
aaggatgacatagaggaggccatgtgtgacgatgtctgcaagaccatcatcgccacggcc
gtgctcctctccttcgtcgtctccatcctcctctcctcctactacatccaccgctaccac
aagaacacgcccaagccgcccatcgcctctgcggagatgaccttccgccggcccgcccag
tcctaccccatcagctactcggccaataacatgcggcgaggctctctggactccatggag
aaccaagtggccatcgacaacttcaaaataccggaggatccaaaatgggagttcccacgt
aagaatctggtgttgggtaagactctcggagagggagagttcggaaaggtggtgaaggca
acagcattccgactgaaggggaaagctggatacaccactgttgctgttaaaatgttgaaa
gaaaatgcctctcacagtgaacttcgtgacctcatgtctgagttcaccctgttgaagcag
gtcaaccatccacatgtcataaagatgtatggagcctgcacccaagatggtccactgtat
ctgatcgtggagtatgccaagtatgggtctctgcgtaacttcctgcgagagagccggaag
gtggggcccagctacatgagcaacgatggcaaccgtaactctagctacctggagaaccca
gacgagagggcactcacccagggcgacctgatctccttcgcttggcagatttcaagaggc
atgcagtacctggcagaaatgaagcttgttcacagagaccttgctgcaagaaatgttttg
gttgctgaaggacggaagatgaagatttcagactttggcttgtcacgagacgtgtatgag
gaagactcctatgttaagcgaagcaagggtcgcattcctgtgaaatggatggcaatagag
tctctgtttgatcacatctacacaacccaaagtgatgtctggtcatttggtgttcttctg
tgggagatcatgactcttggaggaaatccctacccaggcatcgcacctgagaggctcttc
aaccttctgaagacaggctaccgcatggaaaaaccagagaactgctctgaagaaatgtac
aatctgatgcttcgatgctggaaacaggaatccgacaaacgatcaacattcacagagatc
agcaaggagttggagaagatgatggtgaaaagtcgagattacctggacctggcggcttcc
acgccagccgacgccctcctctacgatgacgccctctctgaagaggacacaccactagtg
gactgtaataacgccccactccctcgaaacctcccctccacttggattgaaaacaagctc
tatggcatgtcatacccgaactggccagagaggagcccggtacagctcaacagacttgat
ggcactaaccctgtcttttcaagatatgccaatgatagtgtttatgcaaactggattgct
ttgcctacgtctgcaaaaattgtggacaagcttgacagttaa
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