Clupea harengus (Atlantic herring): 105895410
Help
Entry
105895410 CDS
T09045
Name
(RefSeq) LOW QUALITY PROTEIN: protein mono-ADP-ribosyltransferase PARP4-like
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03410
Base excision repair
char04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105895410
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
105895410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
char03032
]
105895410
03036 Chromosome and associated proteins [BR:
char03036
]
105895410
03400 DNA repair and recombination proteins [BR:
char03400
]
105895410
Enzymes [BR:
char01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
105895410
DNA replication proteins [BR:
char03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
105895410
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
105895410
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
105895410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
PARP
VWA_3
VIT_2
VWA
VWA_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
105895410
NCBI-ProteinID:
XP_042565261
UniProt:
A0A8M1KMH5
LinkDB
All DBs
Position
2:12665870..12682416
Genome browser
AA seq
1305 aa
AA seq
DB search
MEPYQCGGRRGRPGEKALLEEVRSVLPHTLPDTLPTAKLISQTLDLCQVLRDTLAVHEAV
MRSSSPSSLGKYRALGCSIQSLLPQSPDYQTVTQLLQQKDQHREIKIHHVFQVRRGAELQ
MFREELGNIKPLLHSTSPASFVGILSRGLLLPRVGVECHGVERTDVGFLGGGIYFSDSFS
TSVKYSRPGETDGSRLLLVCEVALGRCRELQKKDPTLTCAPEGYDSVHGARSTPRQHSEF
EDDEYVVYSPEQVRLQYVVQYTLPDDQVKDFQPSVDTSVENIPQAGTSDILASEDSGGFG
DVKNPLDSVTAGLLDSAGQMLPLQAVHVKCKLVDLLSQVIIFQTYSNPNTVPIEAKYVFP
LEESAAVCGFEAFINGKHVIGEVKEKEQARKEYKQAIAKGHGAYLMDQDAPDVFTISVGN
LPPGATVLIKVTFISELMVKADSIFFQLPGSVAPWQQSSALNERTQDTVEKVCVSELNGE
FTLSLSIEMPYEITSLRCDTHRIQTKRTDCKAVVGTLPGETLGSDGFHLYITLSEMHMPR
MWVEKHPDKDSQACMLVFYPDFETPRGAGEEPSPGPGCRVEEVVLLLDSSESMRGEALLN
ARQIALQLLSKLDKKIKINIMLFGTEQSDAFMFSKVLGDALEPAKKFIRISLPVGGSTEL
WRPLRSLSLLPPSRGTRSLVLLSDGHVHNPALTLELARSNAAHTRLFTCGLSKTANRHML
RALAQAGXGAYEFFDTKTRHTWSEKVESQVRRLTSPGCSSVAVKWQLFNPTAPPPVQAPA
QLHALFSNCHTLVYGFVPHCTQAALYGDLCGKEIKTMVSTTELQKSKGTLLHKLTARAVI
RDYEDGILHMDEVEHEGKKAQMKSFIVELSKEFSILSQFTSFVAIEERDATKPDEGFTDI
PKLIAEEDVDLLPYMGWEDEEERGEEYEETYELCSDMLCEDEEEDTYELRGRRLLCEVTE
EDVLALDECNYRSMALLRCLTDDSLVDSIFGFLGAPCVESEEVYDDFSSMFVPEDPSLER
CAPLLEESSVWKMAGKSLVLGHGSPVANSVSGAASTLAPAPTVTPAPTLVPVCAPFPPLA
IAHASPYTLPIIGSARASPGRAPASDSAPAGAPAPPPSATFSGPTPDPPPPDVFRARRSS
GFGFGGAKHGPPPHPKSSRHRSTPFLGFLRSSHSRHAAPPPPPKSSLHLSAPPPRPQTSL
HLSAAPPQECDYAGFSGNSSLDCLSAPSDIISAPSPPPSPPPLVYVAATPAVARKSRKAP
VPKKAFHDLMEECSHSRSMAEDGVPLSMIHHVIEHGKKAKKGMPR
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atggagccatatcagtgcggaggacggagggggaggcccggagagaaggccctgctggag
gaggtgcgctctgtgctgccccacaccctgcctgataccctccctactgccaaactcatc
tcacagacactggacctgtgtcaggtgctgagggacacgctggctgtgcatgaagccgtg
atgaggagctccagcccctccagcctggggaagtacagagccctgggctgcagcatccag
agcctcctcccacagagcccagactaccagacagtcacacagctgctgcagcagaaggac
cagcacagagagattaagattcaccatgtgttccaagtgaggcgtggggcggagcttcag
atgttcagggaggagcttggtaacattaagcccctcctccactctacaagtccagccagc
tttgttggaatcctctctcgaggtcttctgctgccccgggttggtgtggagtgtcatgga
gtggagcgcacagatgtgggattcctcggaggcggcatctacttcagcgactccttcagc
accagcgtgaagtactccaggcccggcgagacggacggctcgcgcctgctgctggtgtgt
gaggtggccctgggacgctgcagagagttgcagaagaaggaccccaccctgacctgcgcc
cccgagggctacgacagtgtgcacggggcccgcagcacccccagacagcactctgagttt
gaggacgatgagtatgtggtgtacagccctgagcaggtgaggctgcagtatgtggtccag
tacaccctgccagacgaccaggtcaaggacttccagccgtctgtggacacctctgtggaa
aacatcccccaagcagggacctctgacatcttggccagtgaagacagtggggggttcggg
gacgttaagaacccactggacagcgtgaccgctggtctcctggacagtgctggacagatg
ctccccctgcaggccgtccatgtgaagtgcaagctggtggacctgctatctcaggtcatc
atcttccagacgtactccaacccaaacaccgttcccatcgaggccaagtatgtgttcccc
ttggaggagtctgcagctgtgtgcggctttgaggccttcatcaatgggaagcatgtgatt
ggggaggtgaaggagaaggagcaggcccgtaaagagtacaaacaggccatagcgaagggc
cacggggcttacctgatggaccaggacgcacctgacgtgttcaccatcagcgtggggaac
cttcctcccggcgccaccgtcctcatcaaggtcaccttcatctccgagctgatggtgaag
gcagactccatcttcttccagttgcctggtagcgtggcgccctggcaacagagttctgca
ctcaatgagaggacacaggatacagtggagaaggtgtgtgtgagtgaactcaatggggag
tttaccctcagtttgtccattgagatgccttatgagatcaccagtctgcgctgtgatact
caccgcattcagaccaagaggacggactgcaaggcggtggttggcacgttgccgggggaa
acgctgggatcggacgggttccacctctacatcaccctgtctgagatgcacatgccccgc
atgtgggtggagaaacaccctgacaaggacagccaggcctgtatgctggtgttttaccca
gactttgagacgcccagaggggcgggtgaggagcccagccctgggcctggctgccgggtg
gaggaggtggtgctcctgctggactcctccgagtcgatgcggggggaggccctgctgaat
gcccgccagatcgccctgcagctcctcagcaaactggacaaaaaaatcaagatcaacatt
atgttatttggtacagaacaaagcgatgccttcatgttctccaaagttcttggggatgcg
cttgaaccagccaagaagttcatcaggatctccttaccagtggggggcagcactgagctg
tggaggcccctgcgcagcctcagtctgctgccaccctcccgaggcaccaggagcctggtg
ctgctgtctgacggccacgtgcacaaccccgccctcaccctggagctggcccgcagcaac
gccgcccacacgcgcctcttcacctgtggcctcagtaaaactgccaacagacatatgctg
cgagctctagcccaggcaggtnggggggcctacgagttctttgacacaaagacccgacac
acatggtcagaaaaggtggagtcacaggtgaggcggttgacgtctccaggctgcagctcg
gtggcggtgaagtggcagctgttcaacccaacagcgccccctcctgttcaggcccctgcg
cagctccacgccctcttcagcaactgccacaccttggtctacggcttcgtaccccactgc
acacaggctgctctctatggagacctgtgtgggaaagagattaagaccatggtgtccacc
acagaactgcagaagagtaagggcacgctccttcacaagctcacagcaagagcagttatt
agagattatgaggatggtattcttcacatggatgaagttgaacacgagggaaagaaagcc
cagatgaagtccttcatcgttgagctcagcaaagagttctccatcctctcccagttcacc
agctttgtggccattgaggagagggatgccacgaagcctgatgaggggttcacagacatc
cccaaactgattgcagaagaggatgttgacctgttaccttatatgggctgggaagatgaa
gaggagagaggggaggagtacgaagagacatacgagttgtgttctgacatgctatgtgaa
gatgaggaggaagatacatacgagttgcgtggtcgcagactgctatgtgaagtgacggag
gaagatgtattggccttggatgaatgtaactaccgttctatggcccttctaaggtgtttg
acggatgactcccttgtggattctatctttgggttcctaggtgccccctgcgtagaaagt
gaagaagtgtatgatgacttttcttcaatgttcgttccggaagacccaagtcttgagagg
tgtgctcctctcctcgaggagtcctccgtctggaagatggcaggaaaatcattagtactg
gggcatggaagtcctgtagcaaattcagtcagtggtgccgcctctactcttgcccctgct
cctactgttacccctgctcctactcttgtccctgtctgtgcccctttccctcccctcgcc
attgcccatgcctctccctatactctccctatcattggttctgcccgtgcttctcctggc
cgtgctcctgcctctgattctgctcctgccggtgctcctgctcctcctccttctgcaacc
ttctctggtcctaccccagaccctccccctcctgacgtgtttcgtgctcggcgctctagt
ggtttcggttttggaggtgccaaacatggacctcctcctcatcctaaatcctctcggcac
cgctctactccttttttgggcttcctccggtcaagccactccaggcatgctgctcctcct
cctcctcctaaatcatctctgcacctctctgctcctcctcctcgtcctcaaacctctctg
cacctctctgctgctcctcctcaggagtgtgactatgcaggtttctcaggaaattcttct
ttggactgtctctctgctccctcagatatcatctctgccccttctcctcctccttctcct
cctccccttgtctatgtggctgctactcctgccgttgcacggaagtccagaaaagcacct
gtgccgaaaaaggctttccacgacttgatggaggagtgttctcacagccggtccatggca
gaagacggcgtacctctcagcatgattcatcatgtcatcgaacatgggaagaaagcgaaa
aaggggatgccacggtaa
DBGET
integrated database retrieval system
