Clupea harengus (Atlantic herring): 105896425
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Entry
105896425 CDS
T09045
Symbol
apc2
Name
(RefSeq) adenomatous polyposis coli protein 2 isoform X1
KO
K02085
adenomatosis polyposis coli protein
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04310
Wnt signaling pathway
char04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
105896425 (apc2)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
105896425 (apc2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
105896425 (apc2)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105896425 (apc2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105896425 (apc2)
Protein phosphatases and associated proteins [BR:
char01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105896425 (apc2)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
105896425 (apc2)
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EB / APC
105896425 (apc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APC_basic
Arm_APC_u3
APC_rep
APC_N_CC
Arm
Suppressor_APC
SAMP
APC_r
Sec7-like_HUS
HALZ
Sugarporin_N
Motif
Other DBs
NCBI-GeneID:
105896425
NCBI-ProteinID:
XP_031430598
Ensembl:
ENSCHAG00000009722
UniProt:
A0A6P8FR83
LinkDB
All DBs
Position
10:complement(29383889..29415676)
Genome browser
AA seq
2562 aa
AA seq
DB search
MANASYDQLVRQVEDLRKENTHLRRELQDNSHHLSKLENETSDMKDVLRQLQKKLEQEAC
TLASSGRTDVLDQLKELHMDLTNYYELKYQPHDLRMLPESLGGAAGHGEDCLALHPSSQG
RARSPNRPSSRQSLSVAGESAAIHPHLMDSSISKAGLMGEGRVTAQHLEDLCKERAMLHS
EIEKEERERHWYYSQLQALSQKLAELPRIETFSIQMDMIRQQLEFEAQQVRSVMEERFGT
SDEMVQRTQIRVARLDQLEKELQEAHESRAPLEKTPTSESQTLSCSSKPPMSEMEHASST
SGLEGPGEGGSKVEMVFWLLSMLATRDREEMSRTLLAMSSSQDSCIAMRRSGCVPLLVQI
LHDGPEGGASAAGESGGNAGCSREARSRACAALHNIIYSQPDEGQARREMRVLHVLEQIR
SHSESGWDWMENHVGTPSPGGTITTDIPEPVDPQICQAVCAVMKLSFDEEYRRAMNELGG
LQVVAELMHLDQELYGMQNDPINMALRRYAGMALTNLTFGDVVNKATLCTKKSCLQAIVS
QLASDSEELHQVVSSILRNLSWRADINSKRALRDVGSVPALVTCALQATKESTLKSILSA
LWNLSAHSQENKVAICSVDGALGFLVSTLTYRCQTNSLAIIESGGGILRNVSSLIATRDD
YRQILRDHNCLQTLLQHLRSHSLTIVSNACGTLWNLSARSTKDQELLWDLGAVSMLRNLI
HSKHKMIAMGSAAALRNLLANRPLKFKDTAVISPGSCMPSLYMRKQKALEAELDAKHLAE
TFDSIEKQSPKHPSINKPLRQIESLAKDYASDSGCFDDDEAPNVSSSLDTGTFSMLSMFL
NNSNFLQGPPRKKDGEPERDIGLPLTDDNKHHPPDNEVSLAAEKLAKKITNTVAKIDKLV
EDITMHTSSEDSFSLSSEDHCVDWQYGSDELHEARAKSCSPCRLSDTSSLAHKERLSRAH
ALLRLKTNNSSLSNDSLNSGSTSDGYCGSKDQVHTAAKPQMQRRPDKLELKVAHQDILNN
GLQGTTRMNKNEIPVRDSEGNRDHQTSEPSSTETEKAEEHYLSTPATTSTKVSSDASMST
IKLSPSYQHVPFIQSVAKFGVAKNTINVQAAQAMRRQAWVPTVMTGGSITKFSPIVAARS
PTLGQMETVQKYSVENTPICFSRCSSLSSLSSGDGALDGQSQSENELESDSSLEIIEVED
DEELGRREEEDETLEDLSDSQLLVTDQKTSASISSLISDPIEIPKHREKVFPRGISPMIP
EDQTPSSSSDNYIHETPLVMSRCSSVSSLGSFESHSIVSSIQSDPCSEMISGTVSPSDLP
DSPGQTMPPSRSKTPCCAETGGPEAQNQIGNQWESSLRKFMEIADFKERFNLPPDLDMDM
IYFTVEKPTENFSCASSLSALPLHEHYIQKDVELKLTPLLQQQDNNPNAHHGHRHEMDDQ
GCLDQAERYSEGNSDDDIEILKECINSAMPSRFRKVRPLMSTLSNQMLNPQARRSIQLPV
YMVLPNSNQMCAMRKHGMTERDIYHDDSSFTDSAEGTAINFSSTTSLSDETLQYPMKART
AKDWRARNMEKRELIDQEAKRIEELRIFSRFHKPTKMPNQADVMDNHNQMNRMRHAIPTQ
RLSKEVAAKLTQQRFNREQSPSPNTHSQRQAQNLSRSMPQLDLPIIMQGAELYRSQKSLY
GENAQENRAFQSMRHPTPTEEAIYCFYDDQLDKEEARMTRMGQKQTNDTNNRNTMTRGGL
KVKREDSPQTRLKGFQKIKQNLIMNEAPPCYSLSSSLSSLSDADFEEHKGKKQQVWMKNR
HSMASAPAQCNNKLPHIQSQYEDNSSPSSVSMDSEDDLLLKCITSAMPKQRKKQSGRKRK
SDKKQKQKNGQQKASVERRAEKELESDDMFSDKDSDLNSVEWRAIQEGANSIVTKLQASK
SQEHSSESESVLSFMSGVSVGSSFTPKADIRNNTDNKNAKKLSEGRNQGTPLDFTQRKPV
SNLPVVFRGRTVIYTPKKEANLSQRPTPRKVSPKTDKPAKNPNFAQQRSRSLHRLGWPND
STEFSLPKRSSTPPARIPKSSSSGSSQSSTPSRQTQRKLPPPTQTSKPTPKKDITPASSP
PGKKGNTCLANQPVKSPVNSKTQKSPVRIPFMQNQSKTTRTISPLVTNHPNSLSRQNSQM
SAKRESAANRFELVRMTSSHSSGCETDHNGFLRQLTFIKETPSGLRRDGPCSRSVPTSQH
ASPHRACPKAVFLCSSRCQELKTVTQGPRRGLGRGPAQRPIPEQGLLRQSSALTRATSTD
RDFEVKRPARRTSSESPCRIPRRNVPAPKPRERETFKRDRETYKRDRETFKRHASSPSIN
VLSRVTSRTSLRSSSSDSSARAKSDEDTRKKPQRTGTRGGDKTTWRRIRDEDVPQILKNT
LPATALPLLPSPDGQRPMPPPLPSKLPTIVLKSRKTSDAIVQTEDLSTSKTNSSTSPTIE
NGPAIAEDAAKIILFRKISIASGNNLQDGDSDGSVKSHSTVSSLNFSEGHSGGVGHFRQS
SPSKAVRVTPFNYTPSPMACSQQDMQCQASTLSEKPTEKVEA
NT seq
7689 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgcgtcgtacgaccagctggtgaggcaggttgaggacctccggaaggagaac
actcacctgcgccgggagcttcaggacaactcccaccacctgtccaaactggagaacgag
acctccgacatgaaggatgtcctgaggcagctgcagaagaagttggagcaggaggcctgc
acactggcttcatcagggagaaccgacgtactcgaccagctcaaagaattgcacatggat
ttaaccaactactatgagctgaagtaccagcctcacgacctccgcatgcttcccgagtct
ctgggcggagcggctgggcacggggaagactgcctggccctgcacccctccagccagggg
cgagccaggagccccaaccgcccctcgtcccgccagagcctctccgtggctggggagagc
gctgccattcacccccacctcatggacagctccatctccaaagcaggcctgatgggggaa
ggccgtgtcaccgcccagcatctggaggacctctgcaaggagagagccatgcttcatagt
gagattgagaaagaggaacgagagcgacactggtattactctcagttgcaagccctctct
cagaagctggcagagctaccacgcatcgaaacgttctccatccagatggatatgattcgc
cagcagctggagttcgaggcccagcaggtgcggtccgttatggaggaacgatttggtacc
agtgatgagatggtgcaaaggacacagatccgagtagctcgtctggatcagttggagaag
gagcttcaggaggcgcatgagtctcgtgcccctctggagaaaacacccacctcagagagt
cagacactcagctgctcatccaagcctcccatgtctgagatggagcatgcatccagcacc
tcaggactggaggggccaggggagggggggagcaaggtggagatggtgttctggctcctg
tccatgctggccacgcgggaccgcgaggagatgtcgcgcacgctgctcgccatgtccagc
tcccaggacagctgcatcgccatgcgcaggtccggctgcgtgccgctgctggtgcagatc
ctgcacgacggccctgaggggggggcctcggcggcgggggagagcggcggaaacgccggt
tgcagccgggaggctcggtcgcgggcgtgcgctgcgctgcacaacatcatctactcgcag
ccggacgaggggcaggcgcggcgcgagatgagggtgctgcacgtgctcgagcagatccgc
tcgcacagcgagagcggctgggactggatggagaaccacgtcggcaccccgtcgccaggg
ggaaccataaccacagacatccccgagcccgtggaccctcagatctgccaggcggtgtgt
gcagtgatgaagctgtcctttgatgaggagtacaggcgggccatgaacgagctggggggt
cttcaggtggtggcagaactgatgcacctggaccaggagctgtacgggatgcagaacgac
cccatcaacatggctctgagacgctatgcaggaatggccctcaccaacctcacctttgga
gacgtggtcaacaaggccacgctttgtactaagaagagttgccttcaggccattgtgtct
cagcttgcatcagacagcgaggaattacatcaggttgtgtcgagcatcctgcggaatctg
tcctggcgtgccgacatcaacagcaagagggctctgagagacgtgggcagtgtgccagcg
ctggtcacctgtgcactccaggccacgaaggagtccaccctgaagagcatcctcagtgca
ctgtggaacctctcagctcacagtcaggagaacaaggtggccatctgctccgtcgacggg
gctctggggttcctggtcagcaccctcacctacagatgccagaccaactctctggccatc
attgagagtggtggaggaatcctgcgcaatgtgtccagtcttatcgcaacccgagatgat
tacaggcaaatcctcagggaccacaactgtttgcagaccctcctccagcacctgcgctcc
cacagcctgaccatagtgagcaacgcctgcggaactctctggaacctctctgcccggagc
accaaggaccaggagctactgtgggacctgggcgcagtgagcatgctcagaaacctcatc
cactcaaagcacaagatgatagccatgggaagcgcggcggcgctgaggaacctcctggcc
aaccggccactgaagttcaaggacacggccgtgatatctcccgggtcctgcatgccatcc
ctctacatgaggaagcagaaagcgctggaggctgagctggatgccaaacacctggcagag
acatttgactccattgaaaagcaaagtcccaaacacccaagtatcaacaaaccactgagg
caaattgagagcctagcgaaggactatgcctcggactccggctgctttgatgatgatgag
gccccgaatgtgtcgagcagcctggacacggggacattctcaatgctatccatgttcctg
aataattccaacttccttcagggtccgccccgtaagaaagacggtgagcctgagcgcgat
attgggttgccgctgacagacgataacaagcaccatccccctgacaacgaggtgtccttg
gcggcggaaaagctggcgaaaaagatcaccaacacagtggctaagatcgacaagctagtg
gaagacatcaccatgcacacatcctcagaggacagctttagtctcagctcggaggaccac
tgtgtggactggcagtatggttctgacgagctccacgaggccagagcgaagtcctgctcc
ccctgccgactctcggacaccagcagcctcgcacacaaagagcgactgagtagagctcat
gccctgctacgcctcaaaaccaacaacagcagcctgtccaatgatagcctcaacagtggc
agcaccagtgatggctactgtggcagcaaggaccaggtccacaccgcggcaaaaccacaa
atgcaaaggaggccagacaagcttgaactcaaggtggcccaccaggacatcctcaataac
ggactgcaaggcacaacaaggatgaataaaaatgaaataccagtgcgtgattctgaaggg
aacagagatcatcagacatcggagccaagcagcacggagacagagaaagccgaagagcat
tatctgtcaacgccagcaacaacatcaaccaaggtttcatctgatgctagcatgtctacc
attaagctgtccccctcttatcaacacgtcccattcatacaaagtgttgcaaagtttggg
gttgccaaaaacaccatcaacgttcaggctgcccaggcaatgagaaggcaagcctgggtg
ccgacggtgatgactggtgggagcataaccaagttctctccaatagtagcagccagaagc
ccaacactggggcaaatggaaacggtgcagaaatactcagtggagaacacacccatttgt
ttctcacgctgcagctctctctcctctctgtcctcgggcgacggcgccctagatgggcag
agtcagagcgaaaatgagctcgaaagcgactcatccctggagatcattgaagtggaggac
gatgaagaactggggagaagagaggaagaggatgagaccctagaggacctgagtgatagc
cagctgctcgtcacggaccagaagaccagcgcaagtatcagcagcctgatctcagacccc
attgaaatcccaaagcatcgtgaaaaggtcttccccagagggatctcccccatgattccc
gaggaccaaactccgtcaagttcctccgataactacatccatgagacacctctcgtcatg
agtcgctgtagctcggtcagctccctgggtagctttgaatctcactccatcgttagctcc
atccagagtgatccttgcagtgagatgatcagcgggactgtgagcccaagtgaccttccg
gacagtcctgggcagaccatgcctccgagtcgcagcaaaaccccatgctgtgctgagaca
ggcggcccagaggctcagaaccagattgggaaccagtgggagagcagcctgaggaagttc
atggagattgctgacttcaaagaaaggttcaacctacctccagacttggacatggatatg
atctactttaccgtggagaaaccgactgagaacttctcctgtgcctccagccttagtgca
ctacctcttcatgagcattacatacagaaagacgtggagctcaaacttacacccctgctt
cagcaacaggacaacaaccccaacgcccatcatgggcatagacatgaaatggatgaccaa
ggttgtctcgatcaagccgagcggtacagtgaggggaactcggacgatgatatagagatt
ctcaaagagtgcatcaattctgcaatgccctccaggtttaggaaagtgagaccactgatg
tctactctgtccaaccagatgcttaatcctcaagcaagaagatctattcagctacccgtc
tatatggtgttgcccaacagtaatcaaatgtgtgctatgcgaaagcatggaatgactgaa
agagacatctatcatgacgattcatccttcacagattcagcagagggtactgcaattaac
ttctcaagcaccacgtctttgagtgatgagacccttcaataccctatgaaggccaggacg
gcaaaggactggcgtgccagaaacatggagaaaagggagctgatcgatcaagaggcaaag
cgaatcgaagagctgcggatattttcacgcttccacaagcccactaagatgcccaatcaa
gcagatgtgatggacaatcacaatcagatgaacagaatgagacatgccatccccacccag
aggctgagcaaggaagtagctgctaaactgacccagcagagattcaacagagagcagtca
ccatcacccaacactcacagccaaaggcaggcgcagaacctgtccaggagcatgccgcag
ttggatctgcccatcataatgcaaggggcagagctgtatcgaagccagaagtctctctac
ggggagaatgctcaggaaaacagggcatttcagtctatgcgacacccaacgccaactgag
gaagctatctactgtttctatgacgatcaactggacaaagaggaagcaaggatgacacga
atgggacagaaacaaacaaacgacacaaacaacaggaacaccatgacccgtggagggtta
aaggtcaaacgtgaggacagtccccagacacgcctgaagggcttccaaaagatcaagcag
aatctgatcatgaatgaggccccgccatgttactctctcagttcatccctgagttccttg
agtgatgcagacttcgaagagcacaaagggaagaagcagcaggtctggatgaaaaacaga
cacagcatggcatctgctccagcccagtgtaacaataagcttccccacatccagagtcag
tatgaggacaacagttcacccagctctgtcagtatggactctgaagacgacctcctgctg
aagtgcataacatccgccatgcccaagcaaagaaagaaacaatctgggaggaagaggaag
tcagacaagaagcagaaacagaaaaatgggcagcagaaggcttcagttgaacggagagct
gagaaagagctggagagcgatgacatgttctctgacaaagattccgacctcaacagcgtt
gagtggagagcaatacaagagggtgctaattctatcgtcacaaagctgcaagcctcaaag
tctcaggagcattcatcagagtctgagtcggtgctgtcgttcatgtctggtgtgtctgtg
ggatcgagctttactccaaaggctgacattaggaataacacagacaacaagaatgccaag
aaactctcagagggtagaaaccaagggaccccacttgatttcacccaacgcaagcctgtc
tcaaacttgccagttgttttcagaggccgaacggtcatctatacacctaagaaggaggca
aacctttcacagcgcccaactcccaggaaggtgtctcccaaaaccgacaaaccagcgaag
aatcccaactttgcccagcagaggtctcgcagtctgcacagacttggctggcccaacgac
tccacggagttctctttgcctaagagaagctcaaccccgcctgcgaggataccaaagagc
tcatcgtctggatcctcacagagctctactccatcgaggcaaacccagaggaagcttcct
cctccaacacaaaccagtaagcccaccccaaagaaggacataacaccagcttctagtcca
ccaggcaagaagggaaacacatgccttgcaaatcagcctgtgaaatcccccgtcaacagc
aaaactcagaagtctccagtccgcataccgttcatgcagaaccagtcaaagacaacgagg
acaatctctccactggtgaccaatcatcccaattcacttagcaggcagaacagccagatg
tcagcaaagagagaatcggcagcgaaccgctttgagttggtgcgcatgacttcgtcccac
tccagtggttgtgagacggaccacaatggctttctgcggcagctgaccttcatcaaggag
acacccagtggcttaagacgggatggaccctgctcccgctccgtacccacttcccagcat
gcatcaccccacagagcttgtcctaaagccgttttcctttgctcatctcggtgccaggaa
ctaaagacagtaacacaggggccgagaagagggctgggccgaggaccagcgcagagaccc
atacccgagcagggccttctgaggcagagcagcgcacttaccagggccacctccaccgac
cgggacttcgaagtgaagcgcccggccagaaggacgagctcggagagcccttgcaggatc
cccagaagaaacgtccccgcaccgaagcccagggagcgtgaaaccttcaaacgcgatcgt
gagacgtacaagcgcgaccgtgagacattcaagcgtcacgcctcctctccaagcatcaat
gttcttagccgtgtcaccagccgcacctcgctgcgctcctcttcctctgactccagcgca
cgcgccaagagcgacgaggacaccaggaagaagccgcagaggacggggacacgcggcgga
gataagaccacctggaggaggatccgtgacgaagacgtgcctcagatcctaaagaacacc
ctaccggctactgcgctgcctctgttgccttcacccgatgggcaaagaccgatgccgcct
ccactgccaagcaaactgccaaccatcgtgctgaagtcaaggaagaccagcgacgcaatc
gttcagactgaagacttgtccaccagcaagacaaactcgagcacctccccaacaatcgaa
aatggcccagccatcgccgaggacgccgctaagatcatcctgtttaggaagatcagcatc
gcctctggaaacaacctgcaggacggagattctgatggttccgtgaagagccacagcaca
gtgtcatctctcaacttctctgagggacacagcggtggtgtcggccacttccgccagagc
tcccccagcaaggccgtccgtgtcaccccctttaactatacccccagtcccatggcctgc
tcacagcaggacatgcaatgccaagcctcaacactcagcgagaagccaactgaaaaagtc
gaagcttga
DBGET
integrated database retrieval system
