Clupea harengus (Atlantic herring): 105896695
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Entry
105896695 CDS
T09045
Name
(RefSeq) hyaluronidase PH-20-like
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00531
Glycosaminoglycan degradation
char01100
Metabolic pathways
char04142
Lysosome
Module
char_M00076
Dermatan sulfate degradation
char_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
105896695
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
105896695
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
char02042
]
105896695
00536 Glycosaminoglycan binding proteins [BR:
char00536
]
105896695
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
char00537
]
105896695
Enzymes [BR:
char01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
105896695
Bacterial toxins [BR:
char02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
105896695
Glycosaminoglycan binding proteins [BR:
char00536
]
Heparan sulfate / Heparin
Enzymes
105896695
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
char00537
]
Enzymes
105896695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
Motif
Other DBs
NCBI-GeneID:
105896695
NCBI-ProteinID:
XP_012678941
Ensembl:
ENSCHAG00000010361
UniProt:
A0A6P3VRC8
LinkDB
All DBs
Position
16:complement(15009862..15012592)
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AA seq
519 aa
AA seq
DB search
MGWSNQTSRSCVLLLPVLCISLLDSLSPEPPRPPTAHPIFDGEPFIVSWNIPNLTCNRYN
ITLNTSPFLGVSNPAKVPGQFLSLFYIDRLGLYPYVDEATKRQFNGGVPQRGNLRASLVK
AVDDIEYYIPSRTSPGLAVIDWEDWRPLWERNWGSKRIYRSLSVTYARKRDPSLPTRKAM
AQAKQRFQSAAKSYMLETLSLGARLRPGYLWGFYLFPNCYNYGWMEPGYTGECPREVRRQ
NNRLLWLWEASTALYPSVYLQASLADSPKAALMVRNRVHEALRVAALPQRRSYTAPVYVY
TRPVFVDQPKRLLSLGDLVHTIGEGAAIGASGAVLWGSSGDYDDKASCEALSAYLDDTIN
PYVVNVTAAARVCGDFLCKGKGRCVRRNYTSHEYLHLSPGSFSIHRSELGEFTVVGAPSL
EDLMAFARGFTCQCYAGQNCDAHIPTPVPTKTTTTTTTTTTTTPSPSLSHITTPISPSST
SPEPLSQIPTAIPMWTTGSLPTQPPTEVLSSFSTTPDYI
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgggttggtccaaccagacaagcaggagctgtgtgttgctgctgcccgttctctgcatc
tcactcctggactccctcagcccagaacccccccgcccacccacggctcatccaattttc
gacggggagcccttcatagtttcctggaacatccccaacctcacctgcaacaggtacaac
atcaccctgaacacctcacccttcctgggggtgagcaatcccgccaaggtgcctggccag
ttcctctctctgttctacattgaccgcctagggctgtacccgtatgtggacgaggccacc
aagcggcagttcaatggaggcgtcccgcagaggggaaatctgagagccagcctagtcaaa
gccgtggatgacattgagtactacatcccctcacggacctccccgggcttggctgtgata
gactgggaagactggcgccctctgtgggagaggaactggggctccaagcgcatctaccgc
tccctctcggtcacctatgcccgaaagagggacccctctctccccaccaggaaggctatg
gcccaggccaagcagcgtttccagtccgcagccaagagctacatgctggagactctctct
ctgggcgccaggctgcgacccgggtacctgtggggcttctacctatttcccaactgctac
aactacggctggatggagccaggctacacaggcgagtgccccagggaggtgcgcaggcag
aacaaccggctgctgtggctctgggaggccagcacggccctgtacccctcagtctacttg
caggcttcgctggccgacagtcccaaggcggcgctcatggtgcggaaccgtgtccacgag
gccctgcgggtggctgccctgccccagcggaggagctacaccgcaccggtctacgtgtac
actcgacctgtgtttgtggaccagcccaagcgactgcttagcctgggggacctggtccac
accatcggggagggcgctgccataggggcctcgggagccgtgctgtgggggtccagcggc
gactacgatgacaaggcctcgtgtgaagccttatctgcatatctcgatgacaccatcaac
ccgtatgttgtgaacgtcacagcagctgccagagtgtgcggtgacttcctgtgcaagggg
aagggccgctgtgtgaggaggaactacacctcccatgagtacctgcacctgagtcctggc
agcttcagtatccacaggtcagagctgggagagttcacagtcgtgggggcaccaagcctc
gaggacctgatggcattcgccagaggattcacttgccagtgctatgctgggcagaactgt
gatgctcatatcccaaccccagttcccaccaagactaccaccaccaccaccaccaccacc
accaccaccccaagcccgtccttaagccacatcaccaccccaattagccccagttcgacc
tcccctgaacccctcagccaaatccccaccgccattcccatgtggacaacaggaagtctt
ccgacccagccaccaactgaagtgttgtcatctttcagcaccacgcctgattatatttga
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