Clupea harengus (Atlantic herring): 105899713
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Entry
105899713 CDS
T09045
Symbol
ptgir
Name
(RefSeq) prostacyclin receptor
KO
K04263
prostacyclin receptor
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04080
Neuroactive ligand-receptor interaction
char04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
105899713 (ptgir)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
105899713 (ptgir)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
char04030
]
105899713 (ptgir)
G protein-coupled receptors [BR:
char04030
]
Rhodopsin family
Lipid
Prostacyclin
105899713 (ptgir)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
105899713
NCBI-ProteinID:
XP_012682383
Ensembl:
ENSCHAG00000007250
UniProt:
A0A6P3VVU6
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All DBs
Position
9:26336246..26381749
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AA seq
381 aa
AA seq
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MQSNQTCENTTSISVNGSPVMSTLMFIAGVGGNLMALGILGVHRKEHRAKSSVFCILVTG
LAVTDLLGTCFLSPLVFVCYAQQSSLLGLTGTSHLCSLFAFAMTFFGLASMLILCAMAVE
RCLAISHPYFYSKCVRRSFAKLVLPFIYLFTCAFCLLPFLGYGQYKQYCPGTWCFIRMEA
DGNWGGAEGGGLTADDHHTLAFSLSYATLMALLIAAVFLCNGSVIVSLCRMHRSQMSRRG
SVLSAGRKRKILVFGQGDEEVEHLVLLASMTVIFVVCSLPLTICGYVSALQPTGDDSLNL
ISFRFSALNPIVDPWIFILFRKAVFRHLRQLLRCRFPGNAVKTTAHTALSLPLEVSEARS
PSTRHPVGQGRHLPAPAVSRP
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcaaccagacgtgtgagaacaccaccagcatcagcgttaacgggagtccggtg
atgagcacgctcatgttcatcgccggcgtggggggcaacctgatggcgctgggcatcctg
ggcgtgcaccggaaggagcaccgtgccaagtcctccgtcttctgcatcctggtgacgggg
ctggcagtgaccgacctgctgggcacctgcttcttgagcccgctggtgttcgtgtgctac
gcccagcaatcctccctgctgggcctcaccggcacgtcgcacctgtgcagcctcttcgcc
ttcgccatgaccttctttggcctggcctccatgctcatcctgtgcgccatggcggtggag
cgctgcctggccatcagtcacccgtacttctactccaagtgcgtccgccgcagcttcgcc
aagctggtgctgcccttcatctacctgttcacctgcgccttctgcctgctgcccttcctc
ggctacgggcagtacaagcagtactgccccggcacgtggtgcttcattaggatggaggct
gacgggaactggggcggggcggagggcggcgggctgacggcggacgaccaccacacgctg
gcgttctcgctctcctacgccacgctgatggcgctgctcatcgccgccgtgttcctgtgc
aacggctccgtcatcgtcagcctgtgccgcatgcaccgcagccagatgtctcggcgcggc
tcggtgctctcggccggacgcaagcgcaagatcctggtgttcggccagggcgacgaggag
gtggagcatctggtgctgttggcgtccatgaccgtcatcttcgtggtgtgttcactgccc
ctcacgatatgtggctacgtcagcgccctccagccgaccggcgacgatagcctcaacctg
atctccttccgcttctctgcgctcaaccccatcgtggacccgtggatcttcatcctcttc
cgcaaggccgtcttccgacacctgcgccagttgctgcgctgccgtttcccgggcaacgcc
gtcaagaccaccgctcacaccgcgctttcgctcccgctggaggtcagcgaggccagatcg
cccagcacccgacaccctgtaggccaaggccgacacctgcccgccccagcagtcagcaga
ccctga
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