Clupea harengus (Atlantic herring): 105899896
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Entry
105899896 CDS
T09045
Symbol
grin2aa
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04020
Calcium signaling pathway
char04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
105899896 (grin2aa)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
105899896 (grin2aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105899896 (grin2aa)
Ion channels [BR:
char04040
]
Ligand-gated channels
Glutamate (ionotropic)
105899896 (grin2aa)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
105899896
NCBI-ProteinID:
XP_031421846
Ensembl:
ENSCHAG00000024462
UniProt:
A0A6P3VVT4
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Position
1:complement(6863092..6986609)
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AA seq
1464 aa
AA seq
DB search
MKRSTMGFSKLALLTLPALLALISLSHEAEKVPILNIAVILGRTRYISERDIRALWSKDD
PIDVNVVTLLVNETDPKSIITHMCDLMSGTKIHGVVFGDGTDQEAIAQILDFISSQTLIP
ILGIHGGSSMIMADKDVKSTFFQFGASIQQEALLMLNIMEEYDWHIFSIVTSKFPGYQDF
INILKTTVENSFVGWDLQHIISLDAVDGDSKAPIQLKKVNSPVILLFCSKDEAAIILEEG
RSLGLTGYGFIWIVPSLTTGNPDITPNEFPSGMVSVSYDDWDYPLEARVRDGLGIITTAA
VAMLEEYGDIPEAKTSCYGPMEKAKLPASALHKYMMNVTWDGRDLSFTEDGYQEYPKLVV
IVLNKDREWEKMGKWENRTLTLKFPVWPRYNAFGDAEPDDNHLSIVTLEEAPFVIVENVE
RRTGTCMRNSVPCRKYIKDNATEGGGTYIKKCCKGFCIDILKRIARNVKFTYDLYLVVNG
RHGKKINNMWNGLVGEVVYKKAVMAVGSLTINEERSEVIDFSVPFVETGISVMVSRSNGT
VSPSAFLEPFSASVWVMMFVMLLLVTAMAVFLFEYVSPLGFNRNLAQGRDPHGPSFTMGK
AVWLLWGLVFNNSVPVQNPRGTTSKFIVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVT
GLSDRKFQSPYSYSPPFRFGTVPNGSTERNIRKNYPDMHQYMTKYHQGGVLDALVSLKTG
KLDAFIYDAAVLNYMAGRDEGCKLVTIGSGYIFATTGYGIALQKGSYWKREVDLAILAII
GDGEMEELEAQWLTGICHNEKNEVMSSQLDVDNMAGVFYMLATAMGLSLITFVWEHLFYW
RLRYCFTGVCDGTPGLLFSISRGIWSCIHGVHIEMNKKSSDLDFSPQANMLKLVKSAKQM
TNMTNLSASRINSPKRAAEYMHSASPMIMDMMAEKGNFIYTDNRSYTPKDMIYGDPGDLQ
TYLANRHKDHLNNYIFQGQHPLTLNETNPNTVEVAVSADASQTNAKPRALWKKSVDTVRQ
GQGPDTLAPDPRLSMKSQRYLPEEAAHSDISECSSRAASYQDPDNNKHLKPKDNLKKRST
TSKYPRDCSEAELSYLKTKQVGPKIYTIDSDRELSLHSDPLHYRESRGLATDDLDFPEMY
SDHNDNYRKCDQPIIHLNSSPLHHTDSDLLPDNAYNKHYSNAKDKPLSPHESNDRYKQTH
CRSCLSKVPNFPAGATHYPGPLRSPYNRCEACLHMGNLYDISEDQMLQDAISGGASMHQD
DMFGSYWPQTDGPHVQKRNRLRLSRQHSFDNIMLEKPKEIDLNRPARSVSLKEKDRFLED
SPYANMFNFKADKLFGSRSMLFNHNLEESKRSKSLYPDHTSDNPFMHSLRDDTRLFHGRS
SSDIYKQLAPIKTRNENNLRSSVKSTTSYCSRDGRIPKDMYFSEHVMPYVANKTSAYSAP
RVLNSAQFSNRRVYKKIPSLESDV
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggtccactatggggttctccaagttggcactcctgacccttccagccctcctc
gccctgatcagcctgtctcatgaggcggagaaggttcccatactgaacattgcagtgata
ctaggacgcacgcgctacatctccgaaagggatattcgggccctgtggagcaaggatgac
cccatcgacgtcaatgtagttaccctgctggtgaacgagacggacccaaagagcatcatc
acccacatgtgcgacctcatgtcggggacaaagatccacggggtggtgtttggggacggc
accgaccaggaagccattgcccagattttggattttatttcctcccagacgttgataccc
atcctgggcatccacggaggatcgtccatgatcatggcggacaaggatgtgaagtccaca
ttcttccagttcggggcctccatacagcaggaagctctcctgatgctcaacatcatggaa
gagtacgactggcacatcttctccatcgtgaccagcaagttccccggctaccaggacttc
atcaacatccttaagaccaccgtggagaacagctttgtgggctgggacctgcagcacatc
atcagcctggacgcggtggacggcgacagcaaggcgccgatccagctgaagaaggtgaac
tcgccggtgatcctgctcttctgctccaaggacgaggcggccatcatcctggaggagggc
cgctccctgggcctgacgggctacggcttcatctggatcgtgcccagcttgaccaccggc
aacccggatatcaccccgaacgagtttccctcagggatggtctccgtctcctacgacgac
tgggactaccccttggaggcgcgggtgcgtgacggccttgggattattactacagcggcg
gtggccatgttggaagagtacggggacattccggaggccaagaccagctgctacggcccc
atggagaaggccaagttaccagccagcgctctgcacaagtacatgatgaacgtgacctgg
gacggcagggacttgtccttcactgaggacggctaccaggaataccccaagctggtggtc
attgtgctgaacaaggacagggagtgggagaagatgggtaagtgggagaaccggaccctg
accctgaagttccccgtgtggccgcgctacaacgcgttcggcgacgccgagcccgacgac
aatcacctgagcatcgtcacgctggaggaggcgcccttcgtcatcgtggagaacgtggag
cgtcgcaccggcacgtgcatgaggaactcggtgccctgccgcaagtacatcaaagacaac
gccaccgagggaggtgggacctacatcaaaaagtgctgcaagggcttctgcatcgacatc
ctgaagcggatcgccaggaacgtcaagttcacctacgacctgtacctggtggtcaacggc
aggcacggcaagaagatcaacaacatgtggaacggtctggtcggggaggtggtgtacaag
aaggctgtgatggccgtcgggtccttgacaatcaatgaggagcgctccgaggtcatcgat
ttctccgtcccattcgtggaaacagggattagcgtgatggtatcccggagcaacgggaca
gtctctccgtcagcgtttttggagcccttcagcgcatccgtgtgggtgatgatgtttgtg
atgttgctactggtcacagccatggccgtcttcttgttcgagtacgtcagcccgctggga
ttcaacaggaacctggcccagggcagagatccgcacggaccctccttcaccatgggcaag
gcggtgtggctactctggggtctggtgttcaacaactccgtgcccgtgcagaacccccgc
ggcaccaccagtaagttcatcgtgtccgtttgggccttcttcgctgtcatcttcctggcc
agctacactgccaacctggccgccttcatgatccaggaggagtttgtggaccaggtcact
ggtttgagtgacaggaagttccagagtccgtactcctattcgcccccattccgtttcggg
acggttcccaacgggagcactgagaggaacatcaggaagaactatccggacatgcaccag
tacatgacgaagtaccaccagggcggggtgctggatgcactggtcagccttaagactgga
aaattggatgccttcatctacgacgcggctgtgctgaactacatggctgggagagatgag
ggctgcaagctggtcaccatcggcagcggctacatcttcgccaccactggctatggaata
gccttgcagaaaggctcctactggaaacgcgaggtcgaccttgccatattagccatcatt
ggagacggcgagatggaggagctggaggcccaatggctgactggcatctgccacaacgag
aagaacgaggtgatgagcagccagctggacgtggacaacatggccggcgtcttctacatg
ctggccacagccatgggcctgagcctcatcaccttcgtgtgggagcacctgttctactgg
cgcctgcgctactgcttcaccggggtctgcgatggcacaccgggcctgctcttctccatt
agcaggggcatatggagctgcatccacggcgtccacatcgagatgaacaagaagtcgtcc
gacctggacttcagtccccaggccaacatgctaaagctggtcaagtcggccaagcagatg
accaacatgaccaacctcagcgcctcgcggatcaactcgcccaagcgtgcggccgagtac
atgcactccgcgagccccatgatcatggacatgatggccgagaagggcaacttcatctac
accgacaaccgcagctacaccccaaaggacatgatctacggcgaccccggcgacctgcag
acctacctggccaaccggcacaaggaccacctgaacaactacatcttccagggccaacac
ccgctcaccctaaacgagaccaaccccaacacggtggaggtggcggtgagcgcagatgcg
tcgcagactaacgccaagcccagggccctgtggaagaagtctgtggacaccgtgcgacag
ggtcagggccccgacactttggccccggacccccggctgtctatgaagagccagaggtac
ctgccggaggaggcggcccactccgacatctccgagtgctccagcagggccgcctcctac
caggatccggataataacaagcacctaaaacccaaggacaacttaaaaaaaagatcgaca
acatcaaaataccctagggattgcagcgaagcggagctgtcctacttaaagactaagcag
gtcggcccgaaaatatacaccatagactctgaccgggagctgagcctgcactcagatcca
ctgcactacagagaaagcaggggcttggctacagacgatttggatttccccgagatgtac
tccgaccacaacgacaattaccgcaaatgcgaccagcccatcattcatctcaacagcagt
cccctccatcacacagactccgacctgctccccgacaacgcctacaacaagcactacagc
aacgccaaggacaagcccctcagccctcacgagagcaacgaccgctacaaacagactcac
tgccgcagctgtctatccaaggttccaaacttccctgccggcgccacccactaccccggc
ccgcttcgctccccctacaaccgctgtgaagcttgcttgcacatgggcaacctctatgac
ataagcgaggaccagatgctccaggacgctatcagcggcggtgccagcatgcaccaggac
gacatgttcggcagctactggccgcagacggatgggccgcacgtccaaaagcggaatcgc
ctgcgactgagccgccagcactcttttgacaatatcatgctggagaagccaaaggagatc
gacctgaaccggccggcgcgcagtgtcagcctcaaggagaaggatcgcttcctagaggac
agcccttacgcgaacatgttcaacttcaaggccgacaaactgttcggcagcaggtccatg
ctcttcaaccataacctggaggagagcaagcgcagcaagtcgctgtaccccgaccacacc
tcagacaatcccttcatgcactctttacgagacgacacgcgcctcttccacggccgcagc
tcctctgacatttacaaacagttagcccccatcaaaacgcgaaacgaaaacaatctgagg
tcctcagttaagtccaccacttcatactgctccagggatggtcgaatacccaaggacatg
tacttttcagagcatgtaatgccttatgtagccaacaagactagtgcatactcagctccc
cgggtcctcaattcagcgcagttcagcaatagaagagtgtataagaaaatacctagtctt
gagtcagatgtttaa
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