KEGG   Clupea harengus (Atlantic herring): 105901132
Entry
105901132         CDS       T09045                                 
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03022  Basal transcription factors
char03420  Nucleotide excision repair
char04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    105901132 (cdk7)
  09124 Replication and repair
   03420 Nucleotide excision repair
    105901132 (cdk7)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    105901132 (cdk7)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:char01001]
    105901132 (cdk7)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:char03021]
    105901132 (cdk7)
   03019 Messenger RNA biogenesis [BR:char03019]
    105901132 (cdk7)
   03400 DNA repair and recombination proteins [BR:char03400]
    105901132 (cdk7)
Enzymes [BR:char01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     105901132 (cdk7)
    2.7.11.23  [RNA-polymerase]-subunit kinase
     105901132 (cdk7)
Protein kinases [BR:char01001]
 Serine/threonine kinases: CMGC group
  CDK family
   105901132 (cdk7)
Transcription machinery [BR:char03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     105901132 (cdk7)
Messenger RNA biogenesis [BR:char03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     105901132 (cdk7)
DNA repair and recombination proteins [BR:char03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     105901132 (cdk7)
SSDB
Motif
Pfam: Pkinase DUF1158
Other DBs
NCBI-GeneID: 105901132
NCBI-ProteinID: XP_042564109
UniProt: A0A8M1KR09
LinkDB
Position
7:complement(12909893..12915980)
AA seq 231 aa
MKREKSEYFKLRRTCHSKTDWVDIKFKGGVLQHPLQQDGDSCGVLVIMMANAVMEAFPKI
PNIAFVFDIDNNCAMCSATKPPGPGPSFTDWSCLQLPFLAGDSDLDQLTKIFEALGTPTE
ETWPGMTNLPDYVSFKLFPGTPLEHIFSAAGDDLLELLQGLFTFNPSTRLTATQSLKMRY
FSNRPGPTPGPQLPRPNCSTEALKEKENLVIGTKRKRDAISEGTVSKKLVF
NT seq 696 nt   +upstreamnt  +downstreamnt
atgaaaagagaaaagagtgaatacttcaaactgaggaggacctgccacagcaagactgac
tgggtggacatcaaattcaaagggggtgttctgcaacacccactgcagcaggatggagat
agctgtggggtacttgtaatcatgatggcaaacgcagtcatggaggcctttccgaaaata
ccaaacattgcatttgtgtttgacatagataacaactgtgccatgtgctcagcgacaaaa
ccaccaggtccagggccttccttcactgactggtcttgccttcagttgccattcttggca
ggagactccgacctagatcaactgacaaaaatatttgaagcattgggaacaccaacagaa
gaaacgtggccggggatgaccaacctccctgactatgtgtcatttaagctattccctgga
actccccttgagcatatattcagcgcagctggagatgaccttctggagctactgcaggga
ttattcacctttaacccctctacccggctcacagcgacacagtctcttaagatgaggtac
ttcagtaacaggccgggaccaaccccaggacctcagcttccacggccaaattgctcaaca
gaagccctcaaggagaaggagaacctcgttattgggactaaaaggaaacgtgatgccata
tctgaggggactgtgtccaagaaattggtattttga

DBGET integrated database retrieval system