Clupea harengus (Atlantic herring): 105901132
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Entry
105901132 CDS
T09045
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03022
Basal transcription factors
char03420
Nucleotide excision repair
char04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105901132 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
105901132 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
105901132 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
char01001
]
105901132 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
char03021
]
105901132 (cdk7)
03019 Messenger RNA biogenesis [BR:
char03019
]
105901132 (cdk7)
03400 DNA repair and recombination proteins [BR:
char03400
]
105901132 (cdk7)
Enzymes [BR:
char01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
105901132 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
105901132 (cdk7)
Protein kinases [BR:
char01001
]
Serine/threonine kinases: CMGC group
CDK family
105901132 (cdk7)
Transcription machinery [BR:
char03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105901132 (cdk7)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
105901132 (cdk7)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105901132 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
DUF1158
Motif
Other DBs
NCBI-GeneID:
105901132
NCBI-ProteinID:
XP_042564109
UniProt:
A0A8M1KR09
LinkDB
All DBs
Position
7:complement(12909893..12915980)
Genome browser
AA seq
231 aa
AA seq
DB search
MKREKSEYFKLRRTCHSKTDWVDIKFKGGVLQHPLQQDGDSCGVLVIMMANAVMEAFPKI
PNIAFVFDIDNNCAMCSATKPPGPGPSFTDWSCLQLPFLAGDSDLDQLTKIFEALGTPTE
ETWPGMTNLPDYVSFKLFPGTPLEHIFSAAGDDLLELLQGLFTFNPSTRLTATQSLKMRY
FSNRPGPTPGPQLPRPNCSTEALKEKENLVIGTKRKRDAISEGTVSKKLVF
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagaaaagagtgaatacttcaaactgaggaggacctgccacagcaagactgac
tgggtggacatcaaattcaaagggggtgttctgcaacacccactgcagcaggatggagat
agctgtggggtacttgtaatcatgatggcaaacgcagtcatggaggcctttccgaaaata
ccaaacattgcatttgtgtttgacatagataacaactgtgccatgtgctcagcgacaaaa
ccaccaggtccagggccttccttcactgactggtcttgccttcagttgccattcttggca
ggagactccgacctagatcaactgacaaaaatatttgaagcattgggaacaccaacagaa
gaaacgtggccggggatgaccaacctccctgactatgtgtcatttaagctattccctgga
actccccttgagcatatattcagcgcagctggagatgaccttctggagctactgcaggga
ttattcacctttaacccctctacccggctcacagcgacacagtctcttaagatgaggtac
ttcagtaacaggccgggaccaaccccaggacctcagcttccacggccaaattgctcaaca
gaagccctcaaggagaaggagaacctcgttattgggactaaaaggaaacgtgatgccata
tctgaggggactgtgtccaagaaattggtattttga
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