Clupea harengus (Atlantic herring): 105901561 Help Entry 105901561         CDS       T09045                                  Symbol cad Name (RefSeq) CAD protein isoform X2   KO K11540   carbamoyl-phosphate synthase / aspartate carbamoyltransferase / dihydroorotase [EC:6.3.5.5 2.1.3.2 3.5.2.3] Organism char  Clupea harengus (Atlantic herring) Pathway char00240   Pyrimidine metabolism char00250   Alanine, aspartate and glutamate metabolism char01100   Metabolic pathways char01240   Biosynthesis of cofactors Module char_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP Brite KEGG Orthology (KO) [BR:char00001]  09100 Metabolism   09104 Nucleotide metabolism    00240 Pyrimidine metabolism     105901561 (cad)   09105 Amino acid metabolism    00250 Alanine, aspartate and glutamate metabolism     105901561 (cad)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:char01002]     105901561 (cad) Enzymes [BR:char01000]  2. Transferases   2.1  Transferring one-carbon groups    2.1.3  Carboxy- and carbamoyltransferases     2.1.3.2  aspartate carbamoyltransferase      105901561 (cad)  3. Hydrolases   3.5  Acting on carbon-nitrogen bonds, other than peptide bonds    3.5.2  In cyclic amides     3.5.2.3  dihydroorotase      105901561 (cad)  6. Ligases   6.3  Forming carbon-nitrogen bonds    6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor     6.3.5.5  carbamoyl-phosphate synthase (glutamine-hydrolysing)      105901561 (cad) Peptidases and inhibitors [BR:char01002]  Cysteine peptidases   Family C26: gamma-glutamyl hydrolase family    105901561 (cad)  Metallo peptidases   Family M38: beta-aspartyl dipeptidase family    105901561 (cad) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CPSase_L_D2 GATase CPSase_sm_chain OTCace_N OTCace CPSase_L_D3 MGS Dala_Dala_lig_C ATP-grasp ATPgrasp_Ter Amidohydro_1 ATP-grasp_3 Peptidase_C26 DJ-1_PfpI GARS_A GSH-S_ATP Motif Other DBs NCBI-GeneID:  105901561 NCBI-ProteinID:  XP_012684495 Ensembl:  ENSCHAG00000006860 UniProt:  A0A6P3VY98 LinkDB All DBs Position 15:23719229..23742663 Genome browser AA seq 2228 aa AA seqDB search MSEKMASLILEDGTTFQGRLFGACASVSGEVVFQTGIVGYPEALTDPSYKSQILTLTYPL IGNYGVPKDEEGDFGLSKWFESSRIHVAALIVGELSQNPSHWSVARSLDQWLKEHGIPGL QGVDTRCLTKKIREKGTMLGRLVVEGTLAASIPFDNPDTRNLVKEVSMKEPRVFNPEGSV RIVALDCGIKNNQIRCLCQRGARVTVVPWDHPLDSKDFDGLFISNGPGNPEFCRETVDNL KKVLCVENPKPLFGICLGHQLLSLVIGAKTYKMKYGNRGHNQPCIHKGTGRCYITSQNHG FAVDPNTLPEGWDVLFTNANDQSSEGIVHNTKPLFSVQFHPEHMAGPTDLVSLFDVFLDT VRDVKEGRSGKPVKQRLTDHLAYPDSPDPAAFVRPHKVLILGSGGLSIGQAGEFDYSGSQ AIKALKEENVQTVLINPNIATVQTSKGLADKVYFLPITAEYVTQVIQNERPDGVLLTFGG QTALNCGVELTKRGVLEKYQVRVLGTPVSSIEMTEDRKIFVEKMEEINEHVAPSEAALSV EQAIAAAERLGYPVLVRSAFALGGLGSGFANNSDELSTLVTAAFAHTSQVLVDKSLKGWK EIEYEVVRDAYDNCITVCNMENIDPLGIHTGESIVVAPSQTLNDYEYNMLRNTAIKVIRH LGIVGECNIQYALNPESEQYYIIEVNARLSRSSALASKATGYPLAYVAAKLGLGIPLPAL KNSVTNSTTACFEPSLDYCVVKVPRWDLSKFLRVSTQIGSSMKSVGEVMAIGRSFEEAFQ KALRMVDENCVGFDYKLKPASDQELQMPTDKRIFVLAAALRAGYTVDRLYELTKIDHWFL HKMKNITDHEHLLETYNQDESTIPPEVMRKAKQLGFSDKQIAQAVQSTELAVRKLRHDWK ILPVVKQIDTVAAEWPAQTNYLYLTYNGTENDLAYEHPHVMVLGSGVYRIGSSVEFDWCA VGCIMELRKMGYKTIMVNYNPETVSTDYDMCDRLYFDEISFEVVMDIYEMENPEGIILSM GGQLPNNIAMSLHRQQCRILGTSPEFIDSAENRFKFSRMLDTIGISQPRWKELSDNESAM HFCETVGYPCLVRPSYVLSGAAMNVAYSDRDLEKYLTSAVAVSKEYPVVISKFIQEAKEI DVDAVACDGLVIAIAVSEHVENAGVHSGDATLVTPAQDINQKTMERIKMIVHAIGQELQV TGPFNLQLIAKDDQLKVIECNVRVSRSFPFISKTLGVDMVALAAQVIMGKEVEPVGLMRG TGIVGVKVPQFSFSRLAGADVVLGVEMTSTGEVACFGENRYEAYLKAMLSTGFKIPKKNI LLSIGSYKNKSELLHAVQTLESLGYNLYASLGTADFYTEHGVKVMAVDWPFEEDESDCPN KEKQRSIMDYLEENHFDLVINLSMRNSGGRRLSSFVTKGYRTRRMAVDYSVPLIIDIKCT KMFVQALSQIGQAPAVKTHVDCMTSQKLVRLPGLIDVHVHLREPGATHKEDFSSGTAAAL AGGVTMVCAMPNTNPAIIDQNTLALAQKLAKAGCRCDYALYVGAASDNAAILPSLASSTA GLKMYLNDTYSTLKMDNVSLWMEHFEKWPKHLPIVAHAEKQTVAAILMVAQLYQRAVHIC HVAKREEILIIRAAKQKGIQVTCEVAPHHLFLCEDNVAMIGAGRAEVRPMLGVREDMEAL WENLDIIDCFATDHAPHAVDEKNLEKAPPGYPGLETMLPLLLTAVSEGRLTLDDIIQRLY ENPRRIFGLPTQENTYVEVDLEQEWVIPKHMQFTKSKWTPFEGMKVKGRVRRVVLRGEVA YIDGQVLVPPGYGEDVRTWSSVVPTPILNESAKEPPKTPETSRLPIPSEALRVRPPSPRR TATGDGRFILPPRLHRASDPGLPPDVAALADPYPYPPPLSRILSPQTGQTPAVSHLQTSP MLHPLVGQHILSVHQFSKEQMSHLFNVAHTLRLMVQKERSLDILKGKVMASMFYEVSTRT SSSFAAAMQRLGGSVVHFSEATSSTQKGESLADSVQTMSCYTDVIVLRHPTPGAVETAAK LCRKPVINAGDGVGEHPTQALLDVFTIREELGTVNGMTITMVGDLKHGRTVHSLARLLTQ YRITLRYVTPKNLHMPEKIVSFVASKGIKQEYFDSIEEALPETDVLYMTRIQKERFASEE EYKSCFGQFILTPHIMTGAKRKMVVMHPMPRVNEISPEVDSDPRAAYFRQAENGMYIRMA LLATVLGR NT seq 6687 nt NT seq  +upstreamnt  +downstreamnt atgtcggagaaaatggcatccctgattttagaggacgggaccacgttccaaggccgcctt ttcggcgcttgtgcatcagtgtctggtgaagttgtttttcagacgggcatagtgggctat ccagaggccctcacagacccctcctacaagtctcagatcctgacccttacctaccccctc atcggaaattatggggtccccaaggacgaggagggagactttggactcagcaagtggttt gagtcctccagaatccatgtcgctgctctcatcgttggtgaactgtctcagaatccaagc cactggagtgtagccaggtctctggaccagtggctgaaggagcatggcatccctgggcta cagggggtggacactcgatgcttgaccaagaagattcgtgagaagggaaccatgttgggg aggctggtggtggagggcacccttgctgcgagcattccctttgacaaccctgacaccaga aacctggttaaagaggtgtccatgaaggagccaagggtgttcaaccctgagggcagtgtc aggattgtggcactggactgcggcatcaagaacaaccagatccgctgcctgtgccagaga ggggcccgagtcacagtggtcccctgggaccatccattggatagcaaagactttgatggc ctgtttatcagcaatggcccaggaaacccagagttctgcagagagaccgtggacaacctg aaaaaggtgctgtgtgtggagaacccaaagcccctgtttggcatctgcctcggccaccag ctgctctctctggtcatcggggccaagacctacaagatgaagtatgggaaccgtggtcac aaccagccgtgcatccacaaaggcaccggccgctgctacatcacctcacagaaccacggt tttgccgtagaccccaacaccttgccagaaggctgggacgtactcttcaccaatgccaac gaccagagcagcgagggcatcgtccacaacaccaaacccctcttcagtgtacagttccac cctgagcatatggctggccccactgacctggtcagtctctttgacgtgtttctggacaca gtcagggatgtcaaggagggcaggagtggtaaaccagtgaagcagagactgacagatcac ctggcctacccggattctcccgaccctgctgcgtttgtccgcccccacaaggtgctgatc ctggggtctggaggtctgtccatcggccaagctggagagtttgactactcagggtctcag gccatcaaagccctgaaagaggagaatgtccagactgtgctcatcaaccccaacattgcc acagtgcagacttccaagggcctggcagacaaagtctacttcctgccaatcaccgcagag tatgttacccaggtgatccaaaacgagcgtcctgatggcgttctgctcaccttcggcggt cagacggcgctgaactgcggggtggagctcaccaagcgcggggtgctggagaagtatcag gtgcgcgtcctgggcacccccgtctcctccatcgagatgacggaggaccggaagatcttt gtggagaagatggaggagatcaacgagcacgtggctcccagcgaagcagcactgtctgtg gagcaggcgatagctgcagcagagagacttggctatcctgtgctagtgcgctctgccttt gctctgggaggactgggctctggctttgccaacaacagtgatgagcttagcacgctggtc accgcggcctttgcccacacctctcaagtcctggtggacaagtccctcaagggctggaag gagattgagtatgaggtcgtcagggacgcctatgacaactgtatcacggtgtgtaacatg gaaaacatcgacccgttgggcattcacacgggagagtccatcgtagtggcccctagccag acgctgaacgactacgagtacaacatgctgaggaacaccgccatcaaggtcatccgccat ctgggcatcgtgggagagtgcaacatccagtacgccctcaacccggagtccgagcagtac tacatcattgaggtgaatgcacgcctctcccggagttcagccctggccagtaaggccact ggttatcctttggcctacgtggctgccaaactgggcctggggatccctcttccggccctt aagaactctgtgaccaactccaccacggcctgctttgagcccagtctggattactgtgtg gtgaaggtcccacggtgggacctgagcaagttcctgcgggtcagcacccaaattggaagc tccatgaagagtgtgggtgaggtcatggccataggtcggagctttgaggaggccttccag aaagccttgaggatggtggatgagaactgtgtgggatttgactacaagctcaaaccagct tctgatcaggagctccagatgcccacagacaagcgcatcttcgtcctggccgcagcactc agggctgggtacacggtggaccgcctgtacgagctgaccaagatcgaccactggttcctg cacaagatgaagaacatcacggaccacgagcacctgctggagacctacaaccaggacgag agcaccatccctccagaggtgatgagaaaggccaagcaactgggcttctcagacaagcag atcgctcaggctgtgcaaagcactgaactagccgtgcgaaagttgcggcacgactggaaa atcctgcccgtggtcaagcagatcgacacggtggcggcggagtggccggcgcagaccaac tacctgtacctgacctacaacggcactgagaacgacctggcctacgagcatccccacgtc atggtgctgggctcgggcgtctaccgcatcggcagcagcgtggagttcgactggtgcgcc gtgggctgcatcatggagctccgcaagatgggctacaaaacaatcatggtgaactacaac ccagagaccgtcagcacggactacgacatgtgcgaccgactctactttgatgagatctcc tttgaggtggtgatggacatctatgagatggagaacccagagggcatcatcctgtccatg ggcggccagctgcccaacaacatcgccatgtccctgcacaggcagcagtgccgcatcctg ggcacctcgccggagttcatcgactcggccgagaaccgcttcaagttctcccgcatgctg gacaccatcggcatcagccagcccaggtggaaagagctgtcagacaacgagtctgccatg catttctgcgagacagtgggctacccctgcctggtgaggccctcttacgtgttgagcggg gcagccatgaacgttgcctactccgaccgggacctggagaagtacctgactagcgcggtt gccgtgtccaaggagtaccccgtggtcatctccaaattcatccaggaggctaaggagata gacgtggacgcggtggcgtgtgacggcctggtcattgccatcgccgtctcggagcacgtg gagaacgccggggtgcactctggggacgccacgctggtgacgccggcacaggacatcaac cagaagaccatggagcgcatcaagatgatcgtccacgccatcggccaggagctgcaggtc actggtcccttcaacctgcagctcatcgctaaggatgaccagctgaaagtgatcgagtgc aacgtgcgagtctctcgctctttccccttcatctccaagacgctgggggttgacatggtt gccttggcggcgcaagtgatcatgggaaaggaggtggagccggtgggattgatgagagga actggcattgtgggcgtcaaggtgccccagttctccttctctcggctggcaggcgcagac gtggtgctgggtgtggagatgaccagcactggagaggtggcctgcttcggggagaaccgc tacgaggcctacctgaaggccatgctcagcaccggctttaaaatccccaagaagaacatc ctgctctccatcggcagctacaagaataagagtgagctgctgcatgcggtacaaacactg gagagtctgggctataatctgtatgccagcctgggcactgctgacttctacacagaacac ggagtcaaggtgatggcggtggactggccattcgaggaggatgagtcggactgccccaac aaggagaagcagaggagcatcatggactacctggaggagaaccacttcgacctggtgatc aacctgtccatgaggaactcgggcggtcgacgcctctcctccttcgtcaccaagggttac cgcacacgccgtatggctgtggactactctgtgcccctcatcattgacatcaaatgcacc aagatgttcgtacaggcactaagccagattggtcaagcccctgccgtaaagactcacgtg gactgcatgacgtcacagaagctggtccgtcttccaggcctcattgatgtccatgtccac ctgcgtgagcccggggccactcacaaagaggacttctcctcgggcacagccgctgccctg gcagggggcgtcaccatggtgtgtgccatgcccaacaccaatcccgccatcatcgaccag aacaccctcgccctggcacagaagcttgcaaaggctgggtgccgctgtgactatgccctt tacgtgggagcagcctccgacaatgctgccatcttgccttccctcgcaagttccacagcg ggactgaagatgtacctgaacgacacctattccacgctgaagatggacaatgtctccctg tggatggagcactttgagaagtggccgaagcacttgcccattgtagcccatgctgagaag cagacagtggcggccattttgatggtggcccagctgtaccagagagccgtgcacatctgt catgtggctaaaagggaggagatcctaatcatccgtgcagccaagcagaagggcatccag gtgacgtgcgaggtggcgccgcaccacctcttcctgtgcgaggacaacgtggcaatgatc ggggcaggccgtgcggaggtgcgacccatgctaggcgtaagggaggacatggaggcgctg tgggagaacctggacatcatcgactgcttcgccaccgaccacgcccctcacgcagtagac gagaagaacctggagaaggctcctccaggctacccggggctggagaccatgctgcccctg ctgctcaccgccgtcagcgaggggcgcctcaccctggacgatatcatccagaggctgtat gagaacccccgccgcatctttggcctgcccacacaggagaacacctacgtggaggtggat ctggagcaggagtgggtcatcccaaagcacatgcagttcaccaagtccaagtggacgccc ttcgagggcatgaaggtcaaaggtcgagtgaggagagtggtgttgagaggagaggtggct tacattgatggacaggtcctagtgcctccaggctatggcgaggatgtgaggacctggtca tctgttgtaccaacccctatcctcaatgaatctgcgaaggagcctcctaagacccctgag acttcccgcctgcccatccccagcgaggctctccgtgtgagaccccccagcccacgccgc actgctacaggggacggtcgcttcatcctgcccccccgccttcatcgcgcctccgacccc ggcctgcccccagatgtggctgctttagcagacccctacccctaccctcctcctctgtcc aggatcctctccccccagacaggccagactcccgccgtgtcccacctccagacctccccc atgttacacccgctggtgggccagcacatcctgtctgtgcaccagttcagcaaagagcag atgtctcacttgttcaatgtggctcacacccttcgcctaatggtgcagaaagaaagaagt ctggacattttgaagggtaaagtgatggcctccatgttctacgaggtgagcacgcgcacc agcagctcgttcgcggcggccatgcagaggctgggcggctcggtggttcacttcagcgag gccacctcctccacccagaagggcgagtcgctggccgactccgtgcagaccatgagctgc tacaccgacgtgatcgtgctgcgccaccccactcctggagccgtggagactgctgcgaag ctctgccgaaagccggtgatcaacgctggggatggggtcggggagcaccccactcaggcc ctgctggacgtcttcaccatccgagaggagctgggcaccgtcaacggcatgactatcacc atggtgggtgacctgaagcacgggcggaccgtgcactctctggcccgtctgctgacccag tacaggatcacgcttcgctatgtgacacccaagaacctccacatgccagagaagatcgtc agctttgtggcctccaaaggcattaagcaggagtactttgacagcattgaagaggctctt cctgaaaccgacgtcctgtacatgaccagaatccagaaggagcgctttgcctccgaggag gagtacaaatcttgctttggccagttcatcctgacaccccacatcatgaccggagccaag aggaagatggttgtcatgcacccgatgcccagagttaatgagataagccctgaggtggac tcggacccgagagctgcgtacttccgccaggctgagaatggcatgtacatccgcatggct ctgctggctactgtgctgggaagatga

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