KEGG   Clupea harengus (Atlantic herring): 105902340
Entry
105902340         CDS       T09045                                 
Symbol
ggps1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X1
  KO
K00804  geranylgeranyl diphosphate synthase, type III [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char00900  Terpenoid backbone biosynthesis
char01100  Metabolic pathways
Module
char_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:char00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    105902340 (ggps1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:char01006]
    105902340 (ggps1)
Enzymes [BR:char01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     105902340 (ggps1)
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     105902340 (ggps1)
    2.5.1.29  geranylgeranyl diphosphate synthase
     105902340 (ggps1)
Prenyltransferases [BR:char01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   105902340 (ggps1)
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-GeneID: 105902340
NCBI-ProteinID: XP_012685366
Ensembl: ENSCHAG00000010643
UniProt: A0A6P3W178
LinkDB
Position
13:complement(1602064..1631946)
AA seq 317 aa
MDGDKGATTERILLEPYQYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIEVTEMLHNA
SLLIDDIEDSSKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLMLENPEAVRVFTRQL
LELHRGQGLDIHWRDTYTCPTEEEYRSMVLQKTGGLFGLAVGLMQLFSEWRCDLKPLLNT
LGLYFQIRDDYANLASREYCENKSFCEDLTEGKFSFPTIHAIWSMPESRQVQNILRQRTE
NMDIKRYCVDYLEKVGSFAYTRQTLRDLEVEAYQLIRDLGGNPELEGLVEHLSHLYKEAE
PTSSGSGSGSSNSSSKA
NT seq 954 nt   +upstreamnt  +downstreamnt
atggatggggacaaaggagctacaactgagcggattcttttagaaccctaccagtatttg
cttcagctgccaggaaaacaggtgcgaaccaaattgtcccaagcttttaaccactggctc
aatgtaccagaggataaacttcaggtgatcattgaggtgacggagatgcttcacaatgcc
agcctgctcatcgacgacattgaggacagctccaagctccgacgcggtttcccagtggcg
cacagtatttacggcgtgccgtccgtcatcaactcggccaactacgtctacttcctgggc
ctggagaaggtgctgatgctagaaaacccggaggcggtgcgcgtcttcacccgccagctg
ctggagctgcaccgcggccagggtctggacatccactggcgcgacacctacacctgcccc
acggaggaggagtaccgctccatggtgctccagaagacgggcggcctcttcggcctggcc
gtgggtctcatgcagctcttctccgagtggcggtgcgacctcaagcccctgctgaacacg
ctgggcctctacttccagatccgggacgactacgccaacctggcgtcgcgcgagtactgc
gagaacaagagcttctgcgaggacctgaccgagggcaagttctcgttcccgaccatccac
gccatctggtcgatgcccgagagccggcaggtgcagaacatcctgcgccagcgcaccgag
aacatggacatcaagcgctactgcgtggactacctggagaaggtgggctccttcgcctac
acgcgccagaccctgcgcgacctggaggtggaggcctaccaactcatacgcgacctgggg
gggaaccccgagctggagggcctggtggagcacctcagccatctctataaagaggctgaa
cccacgagcagcggcagcggcagcggcagcagcaacagcagcagcaaggcttag

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