KEGG   Clupea harengus (Atlantic herring): 105902667
Entry
105902667         CDS       T09045                                 
Symbol
cxcr4b
Name
(RefSeq) C-X-C chemokine receptor type 4b
  KO
K04189  C-X-C chemokine receptor type 4
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03250  Viral life cycle - HIV-1
char03260  Virion - Human immunodeficiency virus
char04020  Calcium signaling pathway
char04060  Cytokine-cytokine receptor interaction
char04144  Endocytosis
char04672  Intestinal immune network for IgA production
char04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    105902667 (cxcr4b)
   03260 Virion - Human immunodeficiency virus
    105902667 (cxcr4b)
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    105902667 (cxcr4b)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    105902667 (cxcr4b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    105902667 (cxcr4b)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    105902667 (cxcr4b)
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    105902667 (cxcr4b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:char04030]
    105902667 (cxcr4b)
   04050 Cytokine receptors [BR:char04050]
    105902667 (cxcr4b)
   04090 CD molecules [BR:char04090]
    105902667 (cxcr4b)
G protein-coupled receptors [BR:char04030]
 Rhodopsin family
  Chemokine
   CXC Chemokine
    105902667 (cxcr4b)
Cytokine receptors [BR:char04050]
 Chemokine receptors
  CXC Chemokine
   105902667 (cxcr4b)
CD molecules [BR:char04090]
 Proteins
  105902667 (cxcr4b)
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srsx COX2_TM
Other DBs
NCBI-GeneID: 105902667
NCBI-ProteinID: XP_012685764
Ensembl: ENSCHAG00000025343
UniProt: A0A6P3W029
LinkDB
Position
2:23958791..23960661
AA seq 358 aa
MNSMEGYMDPYVIEFDDFNNSDDGSGVEDYEELCESAHNNDFKKIFLPIVYGIIFVLGIV
GNGLVIIVMGYQKKMSNMTDKYRLHLSVADMLFVLSLPFWAVDVASSWYFGRFLCVAVHM
IYTVNLYSSVLILAFISLDRYLAVVKATNSLSTRKLLAERIIYLGVWLPAALLTVPDMVF
ARAQERGSRIVCERIYPQEGNVIWMAVFRFQNILVGFVLPGLVIFTCYCIIISRLSQGPK
GQTLKRRALKTTVILIICFFICWLPYCIGILLDTLSELNVIHSCTLMQGLQIWIPISEVL
AYFHCCLNPILYAFLGVKFKKSARSTLNSRSSQKFLTKKRGPISSVSTESESSSVLSS
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgaactcgatggagggatacatggacccctatgtgattgaatttgacgacttcaacaac
tccgatgatggatcaggggttgaggactatgaggagctctgtgaatcagcgcacaacaat
gattttaagaaaatcttccttccaatcgtgtacggaataatttttgttttgggcatcgtc
ggaaatgggcttgtgatcattgtgatgggctaccagaagaagatgtccaacatgaccgac
aaataccgacttcacctctctgtggctgatatgttgtttgtgctttcgttgcccttctgg
gcagttgatgtggcgagcagttggtacttcgggagattcctctgtgttgctgtgcacatg
atctacactgtcaacctgtacagcagcgtgctgattttggctttcatcagcctggacaga
tacctggcagttgttaaagcgaccaacagcctgtccactaggaaactgctcgccgagcgc
attatttacctcggagtttggctgccagctgcgctgctcactgtgcctgacatggtgttt
gcaagagcgcaggagaggggctccaggattgtctgcgaacgtatatacccacaggagggc
aacgtgatttggatggctgtgttccgtttccagaacattctggtgggatttgtgctgcct
gggctcgtcatcttcacctgctactgcatcataatctcaagactctctcagggtcccaaa
ggacagacgttgaagaggagggctctgaaaacaacagtcatcctcattatttgcttcttc
atctgctggctcccgtactgtattggcatcttgttggacactctctcagaactgaatgtc
atccacagctgtacgctgatgcagggccttcagatttggattcccatatcagaggtgctg
gcttacttccactgttgtctgaatcccattctgtatgctttccttggggtgaaattcaag
aaatccgcccgaagcacactcaacagcagatccagtcagaagtttctcaccaagaagagg
ggacccatttcatcagtatccacagaatcagaatcttccagtgtcctttccagttaa

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